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The map label for this gene is 54294794

Identifier: 54294794

GI number: 54294794

Start: 2093085

End: 2094890

Strand: Reverse

Name: 54294794

Synonym: lpl1871

Alternate gene names: NA

Gene position: 2094890-2093085 (Counterclockwise)

Preceding gene: 54294795

Following gene: 54294793

Centisome position: 62.61

GC content: 36.16

Gene sequence:

>1806_bases
ATGGTTAGGGAGTGTACAAGTTTTAAAGGTGGTTTGAATTTAAATTTTGTCGAGAATGCCGAGTTCGAATCTAGAAAAAA
CATACCTCCTGAAGAGCAAAGGGCAGTTCTGATTCGTAATACTTTGCGATTGTTAATGATGGGTTGGAATACCTCATGGA
CAGAATTATTTTCCTGGGAAACCTTTAAGGCTATTTACCTTCAAAGAGATCCTCTGTTGCTGAAAGAGTTTCGATTAGCC
TTTCAGAAAGGGTTTGATGCACTATTTACCCAATTAAGTGGCAGGCAATTTAATTCGCAACAAAATGAACAAATACAACT
TTACCTTAGTAACTGTCTTAGTTATTTGCCTTTATTTGATTTAAATCCTTACGAGTCGATTAAAGTTCCCCAGAGAATCA
ATGATCAATGGGTTATGGTTGACTATTACATCAAGCCCATAGAACTTACAAATCATCGTGGAAAAAATGATCTGATTTTG
CGAGATGATGATAGGGTTTTTGCTTATGGACTTGAGCCAATAGATAACCCAAATGCCCAGTCTCATTTAATTTTTATGGG
AACTACTTATCCTGCTGGTCAAGGTTTTATTTCCCAATTAAATACTGATTTGAAAGGATTTGAAACGGTTGGCTATTCTT
TATATAAAAATGGAAGAGATAGAATTAAGGACTGGATTTTAAAACAAAACAGTAAAATTCATGTGTGTGGTATAAGCCTT
GGAGGCTCTTTAAGTCTGCTTTTGGCTATTGATATGGGAAAATACCTTTCCAGAGTGGATGCCTTAAACCCTGCAGGACT
TCATGATACTGATAATAAAGTGAAGTACGATAAATGGGATAAAATCAAAAAGAAACCTTTGGTTGTTGTCCAACAGCAAG
GTAACGATCCTGTGTCTTTTTTTGGGGTTTGGAAAAAAGAGTGGGACATTTTTCATGTCAAGCCTCCAAAAGATAAACAA
GGTCCTAATCTTTTTTGTGATCATTTTCTGAATTATGCCGGATTTGCTGAAACAGAATTTACTTATGTCTCTGCTGAGCA
ACAAAATGCCAAAAGGAAAACAAGGAATTTCTGGCTTTATTCTTTAGGGAGAGGGGTTCTATATTATTTTGGCCTGGCTC
CCTATACCTACTTAATCAGACCTGTAATACACTATATTGCAGAGCAATGGCCGTTAATCGTATTCGGTATAATTCCTTTA
CTGACTATTGGTACTCTTATAGGGTTAAGTACCGCAGGAATTATTCCCGCTATTGTTTCAATAGGTACTCTTGCTGTTTT
TGCAATATCCAGTGGAATTTTTTATTTGTCTTTTGGCTTAAGTAGTAATGAAGAAGACAAAAACACTTGGGGAGGGATGT
TTGATTTCATTTTAAAAGGTAGCGAAAAAGTGCTGGATGAGAATGAGATAAAACTGGCCAAGCTTCATCATCCATCTACA
CCCAGAAACCCTGAAATGGACATCTATAAGAACGAAACTGCGATCGATTTAACTTATAAGCAAATTAATACCTATTATCA
GGTAACTCGTTGTCTTCTGAAACAAAAAGAGTTTCTTCCTCTTAAGGATAAACCCGAGAAACGTTTTGGAGGGTTATCTA
AAAAAGAAGCCTTATTAGCAAGCATGAATTCTGCCTCGCATGACGAAGTCATTTCACTTCAGATACCCAAGGCAAAGGCT
GTGCATATCAAGCATTCTTTAACTTTGGCAGCCAAAATAGGTATGGAAAATGAAATAGAATTAAAATCTGCTTTGAAAAA
AGAGTATAATCAGTATCAAATAGGTAAGCATCAAAGGCTTTGCTAG

Upstream 100 bases:

>100_bases
CAGTTACTTGGTTTTTAAATGACTAGCTTAGCAGTCTGCGAGCCAGTGATTGTAATTATCTTGAACTCATAGTTATAAAC
AAGCTATTCAGAGGTTTTTT

Downstream 100 bases:

>100_bases
GTAAAGATTCGTGCATCACGTAGAAGATCTAATTAGTATTTTTAATTATTGCTTTGAGAAGGACTACAATACCCGTCTGG
TTAGAGGGGGAGATGAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MVRECTSFKGGLNLNFVENAEFESRKNIPPEEQRAVLIRNTLRLLMMGWNTSWTELFSWETFKAIYLQRDPLLLKEFRLA
FQKGFDALFTQLSGRQFNSQQNEQIQLYLSNCLSYLPLFDLNPYESIKVPQRINDQWVMVDYYIKPIELTNHRGKNDLIL
RDDDRVFAYGLEPIDNPNAQSHLIFMGTTYPAGQGFISQLNTDLKGFETVGYSLYKNGRDRIKDWILKQNSKIHVCGISL
GGSLSLLLAIDMGKYLSRVDALNPAGLHDTDNKVKYDKWDKIKKKPLVVVQQQGNDPVSFFGVWKKEWDIFHVKPPKDKQ
GPNLFCDHFLNYAGFAETEFTYVSAEQQNAKRKTRNFWLYSLGRGVLYYFGLAPYTYLIRPVIHYIAEQWPLIVFGIIPL
LTIGTLIGLSTAGIIPAIVSIGTLAVFAISSGIFYLSFGLSSNEEDKNTWGGMFDFILKGSEKVLDENEIKLAKLHHPST
PRNPEMDIYKNETAIDLTYKQINTYYQVTRCLLKQKEFLPLKDKPEKRFGGLSKKEALLASMNSASHDEVISLQIPKAKA
VHIKHSLTLAAKIGMENEIELKSALKKEYNQYQIGKHQRLC

Sequences:

>Translated_601_residues
MVRECTSFKGGLNLNFVENAEFESRKNIPPEEQRAVLIRNTLRLLMMGWNTSWTELFSWETFKAIYLQRDPLLLKEFRLA
FQKGFDALFTQLSGRQFNSQQNEQIQLYLSNCLSYLPLFDLNPYESIKVPQRINDQWVMVDYYIKPIELTNHRGKNDLIL
RDDDRVFAYGLEPIDNPNAQSHLIFMGTTYPAGQGFISQLNTDLKGFETVGYSLYKNGRDRIKDWILKQNSKIHVCGISL
GGSLSLLLAIDMGKYLSRVDALNPAGLHDTDNKVKYDKWDKIKKKPLVVVQQQGNDPVSFFGVWKKEWDIFHVKPPKDKQ
GPNLFCDHFLNYAGFAETEFTYVSAEQQNAKRKTRNFWLYSLGRGVLYYFGLAPYTYLIRPVIHYIAEQWPLIVFGIIPL
LTIGTLIGLSTAGIIPAIVSIGTLAVFAISSGIFYLSFGLSSNEEDKNTWGGMFDFILKGSEKVLDENEIKLAKLHHPST
PRNPEMDIYKNETAIDLTYKQINTYYQVTRCLLKQKEFLPLKDKPEKRFGGLSKKEALLASMNSASHDEVISLQIPKAKA
VHIKHSLTLAAKIGMENEIELKSALKKEYNQYQIGKHQRLC
>Mature_601_residues
MVRECTSFKGGLNLNFVENAEFESRKNIPPEEQRAVLIRNTLRLLMMGWNTSWTELFSWETFKAIYLQRDPLLLKEFRLA
FQKGFDALFTQLSGRQFNSQQNEQIQLYLSNCLSYLPLFDLNPYESIKVPQRINDQWVMVDYYIKPIELTNHRGKNDLIL
RDDDRVFAYGLEPIDNPNAQSHLIFMGTTYPAGQGFISQLNTDLKGFETVGYSLYKNGRDRIKDWILKQNSKIHVCGISL
GGSLSLLLAIDMGKYLSRVDALNPAGLHDTDNKVKYDKWDKIKKKPLVVVQQQGNDPVSFFGVWKKEWDIFHVKPPKDKQ
GPNLFCDHFLNYAGFAETEFTYVSAEQQNAKRKTRNFWLYSLGRGVLYYFGLAPYTYLIRPVIHYIAEQWPLIVFGIIPL
LTIGTLIGLSTAGIIPAIVSIGTLAVFAISSGIFYLSFGLSSNEEDKNTWGGMFDFILKGSEKVLDENEIKLAKLHHPST
PRNPEMDIYKNETAIDLTYKQINTYYQVTRCLLKQKEFLPLKDKPEKRFGGLSKKEALLASMNSASHDEVISLQIPKAKA
VHIKHSLTLAAKIGMENEIELKSALKKEYNQYQIGKHQRLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68940; Mature: 68940

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRECTSFKGGLNLNFVENAEFESRKNIPPEEQRAVLIRNTLRLLMMGWNTSWTELFSWE
CCCCCCCCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHCCC
TFKAIYLQRDPLLLKEFRLAFQKGFDALFTQLSGRQFNSQQNEQIQLYLSNCLSYLPLFD
CEEEEEEECCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
LNPYESIKVPQRINDQWVMVDYYIKPIELTNHRGKNDLILRDDDRVFAYGLEPIDNPNAQ
CCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCC
SHLIFMGTTYPAGQGFISQLNTDLKGFETVGYSLYKNGRDRIKDWILKQNSKIHVCGISL
CEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEC
GGSLSLLLAIDMGKYLSRVDALNPAGLHDTDNKVKYDKWDKIKKKPLVVVQQQGNDPVSF
CCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCEEE
FGVWKKEWDIFHVKPPKDKQGPNLFCDHFLNYAGFAETEFTYVSAEQQNAKRKTRNFWLY
EEEEECCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCEEEE
SLGRGVLYYFGLAPYTYLIRPVIHYIAEQWPLIVFGIIPLLTIGTLIGLSTAGIIPAIVS
ECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGTLAVFAISSGIFYLSFGLSSNEEDKNTWGGMFDFILKGSEKVLDENEIKLAKLHHPST
HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCC
PRNPEMDIYKNETAIDLTYKQINTYYQVTRCLLKQKEFLPLKDKPEKRFGGLSKKEALLA
CCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHH
SMNSASHDEVISLQIPKAKAVHIKHSLTLAAKIGMENEIELKSALKKEYNQYQIGKHQRL
HCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC
C
C
>Mature Secondary Structure
MVRECTSFKGGLNLNFVENAEFESRKNIPPEEQRAVLIRNTLRLLMMGWNTSWTELFSWE
CCCCCCCCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHCCC
TFKAIYLQRDPLLLKEFRLAFQKGFDALFTQLSGRQFNSQQNEQIQLYLSNCLSYLPLFD
CEEEEEEECCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
LNPYESIKVPQRINDQWVMVDYYIKPIELTNHRGKNDLILRDDDRVFAYGLEPIDNPNAQ
CCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCC
SHLIFMGTTYPAGQGFISQLNTDLKGFETVGYSLYKNGRDRIKDWILKQNSKIHVCGISL
CEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEC
GGSLSLLLAIDMGKYLSRVDALNPAGLHDTDNKVKYDKWDKIKKKPLVVVQQQGNDPVSF
CCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCEEE
FGVWKKEWDIFHVKPPKDKQGPNLFCDHFLNYAGFAETEFTYVSAEQQNAKRKTRNFWLY
EEEEECCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCEEEE
SLGRGVLYYFGLAPYTYLIRPVIHYIAEQWPLIVFGIIPLLTIGTLIGLSTAGIIPAIVS
ECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGTLAVFAISSGIFYLSFGLSSNEEDKNTWGGMFDFILKGSEKVLDENEIKLAKLHHPST
HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCC
PRNPEMDIYKNETAIDLTYKQINTYYQVTRCLLKQKEFLPLKDKPEKRFGGLSKKEALLA
CCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHH
SMNSASHDEVISLQIPKAKAVHIKHSLTLAAKIGMENEIELKSALKKEYNQYQIGKHQRL
HCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA