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The map label for this gene is fliS [H]

Identifier: 54294225

GI number: 54294225

Start: 1441632

End: 1442042

Strand: Reverse

Name: fliS [H]

Synonym: lpl1290

Alternate gene names: 54294225

Gene position: 1442042-1441632 (Counterclockwise)

Preceding gene: 54294226

Following gene: 54294224

Centisome position: 43.1

GC content: 35.77

Gene sequence:

>411_bases
ATGAGAATGAAAAACCTATATTCACAAATTTCCAGCCAATACAAAGCCATAGAGCTACAAACTCGCATAGAAGCAGCCTC
CCCTCATGAACTTATAGATTTATTAATTCAAGGAGCCCGATCTCACATTGCTACTGCTCAGGGTAATATACAGCGTAACC
AAATTAAAGAAAAAGGAGAACACATTGGCAAAGCCATTAGCATCATTGAAGGTTTAAAAATGAGTCTCAATCATGATAAA
GGTGGAGAAATTGCCGAAAATTTACTCCAGTTATATGATTATGTTCAACAAATACTACTTAAAGCCAATTTAAAAAATGA
TGAAGATTTATTAGCTCAGTCTAATATGCTATTAGCTGAAGTGCATCAAGCCTGGCAAGCGATTAACTCTGGTGCTGGTA
ATGAGCTTTAA

Upstream 100 bases:

>100_bases
TGCTCTGGACACTCTACTCAGCCAATTACAAAGCACTAGTGTTTTTCTATCCCAGCAATTGGCCAATTTACCCCAATTAA
AATTGAAATAATAGGAGGTA

Downstream 100 bases:

>100_bases
TATTTGCAATGAGCTCCCATGATTCAGTATTTGCTTTTTACGGCTTTATAGCAACCAAAATAAGAGTCTTCTTGACTTGG
CAATTATTAAACCCAGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRMKNLYSQISSQYKAIELQTRIEAASPHELIDLLIQGARSHIATAQGNIQRNQIKEKGEHIGKAISIIEGLKMSLNHDK
GGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAEVHQAWQAINSGAGNEL

Sequences:

>Translated_136_residues
MRMKNLYSQISSQYKAIELQTRIEAASPHELIDLLIQGARSHIATAQGNIQRNQIKEKGEHIGKAISIIEGLKMSLNHDK
GGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAEVHQAWQAINSGAGNEL
>Mature_136_residues
MRMKNLYSQISSQYKAIELQTRIEAASPHELIDLLIQGARSHIATAQGNIQRNQIKEKGEHIGKAISIIEGLKMSLNHDK
GGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAEVHQAWQAINSGAGNEL

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=114, Percent_Identity=34.2105263157895, Blast_Score=69, Evalue=8e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 15173; Mature: 15173

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKNLYSQISSQYKAIELQTRIEAASPHELIDLLIQGARSHIATAQGNIQRNQIKEKGE
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HIGKAISIIEGLKMSLNHDKGGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VHQAWQAINSGAGNEL
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRMKNLYSQISSQYKAIELQTRIEAASPHELIDLLIQGARSHIATAQGNIQRNQIKEKGE
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HIGKAISIIEGLKMSLNHDKGGEIAENLLQLYDYVQQILLKANLKNDEDLLAQSNMLLAE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VHQAWQAINSGAGNEL
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]