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The map label for this gene is 54294214

Identifier: 54294214

GI number: 54294214

Start: 1426603

End: 1428345

Strand: Reverse

Name: 54294214

Synonym: lpl1279

Alternate gene names: NA

Gene position: 1428345-1426603 (Counterclockwise)

Preceding gene: 54294215

Following gene: 54294213

Centisome position: 42.69

GC content: 37.06

Gene sequence:

>1743_bases
ATGGCAGCAGTTTTAAATAATTCTTATAAAATAAATAACTCATTACACAGTTTATTACTTGAAAAAGACCTTCTTGTTTC
ACAATCAGAAATGGAGCATTTCATATCCATTGCGCACCAGCAATGTTTAGATCGATTGCAACAGGCAGCACTCCGTGAAG
GATTAATAGACAAGGAAATAACCAGCCTTCATATACATGATTATCTTGATTTACTTTATCATCAACAGAATAAGCAAAAA
CCGGAAAAAACATTTGATCGATGGCCTCTTCTAAAAAAGGAACTCGATGAAAGCATCAACAATCAGGCGTTAGCCCTCGC
TTATTATCATTGCTGGCAACAATCGCTGAAGCAACAGGCGAAAAACCACTCCAGTTTATGGTCATGGTTATCAGAGCAAC
ATAATAAACAACAAATTCTGACTTTTTTAGAGCAATGGGGTTGCATAGGGCACCCGTATCATCCTAATTTCCGCGCAAAA
ATGGGGTTTATTCCTGAAGAAGTGATTCGATACTCCCCTGAATTTAACGCGCAGGTAGATATTCCCTGGCTTGCAATTCA
TCGCTCCGAAGCGTTTACTTCAATTGATGCGACTAGCTATTCTTTGTTGTTTGCCCAACATTTTGCTAAAGAATATCAAT
TGTGGAATTATTCTGTCCAAAAACAACAATTAGATCCCGAACAGTATTTGCCTCTCCCAGTTCATCCCTGGCAATGGAAT
AACAAATTACAAACACTGGCCTCAGTATTAATCAATTCAAAGCAATTATTAATAACAGAGGCTTTTCAAAAAACCAAACC
ATCCATGTCGTTCCGAACGATGATGCCTTTAGATAACAAAGGTCCACACTTAAAATTAGCTACAGCAATCCATACTACTT
CTGCTTTACGCACTGTATCTCCTGCATCAGTAAGCAATTCGTCTCCTCTTTCCAGTTGGCTTAGGCAATTACTGACTCAG
TATCAAAGTTTTGAAAAGCCACTATTTCTAGCCAGGGATTTAGCGGGGATTAACACCACACACCCATCCATTTCTCCACA
AAATAAAAAGCATTTGGCTATGATAGTACGTGAAAATCCACTGGAATTGATCGATGCATCACAAATATTAGCACCTGTAG
CTGCACTCTATGCTCTTTCTCCGGTCAGTCAACGTGCTTTATTCATTGAAATTATTGAAACAAGTGGCATGGAGCCTGAA
TTATATTTTATTGAATACAGCCGATGTATTCTCGAATGCCAGCTTCATTTATTATTAAGCTATGGCGTTGCGTTGGAAGC
CCAACAACAAAACACTTTAGTCGTTTTTCAGTCTCATCGACCTGTTGGATTAGTTATTCGAGATCTTGGCGGCATCAGGG
TCTGTTTTAATTCGCTATATGAGACAACACCCAAACCTAATCTTCATCCAGACTCTACCATTTCATGCCACGAATTGAGT
GATCTCTTTAATACCTTCATTTATGGAAATTTACTGAGTAACTTAACTTTTTGCATTAATTGTTTACATGATAACTATAA
CTTGAATAAAAAAAACCTTTGGATCCTGCTAAAACAAATTGCAAATCAATTATTACAAAATTTTAAAAAGGAAATTAATC
CATTGATATACCAAAAATTCCAACAACATTTATTCTCTCTTCCCTGGCAACATAAAAGTTTGCTGAGCATGAGACTCAAT
CAAAATCAGGATAACCTGGTATTTTTTAGTCTTGACAACCCATTGAGCCAAGATAATGAATAA

Upstream 100 bases:

>100_bases
CTCTCTATTATTTAAGCAAATAAATCACAATACATTGTTGCAAATGATAATCATTATCATTTATAGTATTGTCGTTTCTT
ACTTATTCACGGAAATAATC

Downstream 100 bases:

>100_bases
ACCAGTTCAAAAAATGATGCTCTCAGGTCAGTTTTTGATGATATTGGCCTTAGAAATGACGAATCCCTTTCTACCACTAT
TGATCGCGCACCAAAGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 579

Protein sequence:

>580_residues
MAAVLNNSYKINNSLHSLLLEKDLLVSQSEMEHFISIAHQQCLDRLQQAALREGLIDKEITSLHIHDYLDLLYHQQNKQK
PEKTFDRWPLLKKELDESINNQALALAYYHCWQQSLKQQAKNHSSLWSWLSEQHNKQQILTFLEQWGCIGHPYHPNFRAK
MGFIPEEVIRYSPEFNAQVDIPWLAIHRSEAFTSIDATSYSLLFAQHFAKEYQLWNYSVQKQQLDPEQYLPLPVHPWQWN
NKLQTLASVLINSKQLLITEAFQKTKPSMSFRTMMPLDNKGPHLKLATAIHTTSALRTVSPASVSNSSPLSSWLRQLLTQ
YQSFEKPLFLARDLAGINTTHPSISPQNKKHLAMIVRENPLELIDASQILAPVAALYALSPVSQRALFIEIIETSGMEPE
LYFIEYSRCILECQLHLLLSYGVALEAQQQNTLVVFQSHRPVGLVIRDLGGIRVCFNSLYETTPKPNLHPDSTISCHELS
DLFNTFIYGNLLSNLTFCINCLHDNYNLNKKNLWILLKQIANQLLQNFKKEINPLIYQKFQQHLFSLPWQHKSLLSMRLN
QNQDNLVFFSLDNPLSQDNE

Sequences:

>Translated_580_residues
MAAVLNNSYKINNSLHSLLLEKDLLVSQSEMEHFISIAHQQCLDRLQQAALREGLIDKEITSLHIHDYLDLLYHQQNKQK
PEKTFDRWPLLKKELDESINNQALALAYYHCWQQSLKQQAKNHSSLWSWLSEQHNKQQILTFLEQWGCIGHPYHPNFRAK
MGFIPEEVIRYSPEFNAQVDIPWLAIHRSEAFTSIDATSYSLLFAQHFAKEYQLWNYSVQKQQLDPEQYLPLPVHPWQWN
NKLQTLASVLINSKQLLITEAFQKTKPSMSFRTMMPLDNKGPHLKLATAIHTTSALRTVSPASVSNSSPLSSWLRQLLTQ
YQSFEKPLFLARDLAGINTTHPSISPQNKKHLAMIVRENPLELIDASQILAPVAALYALSPVSQRALFIEIIETSGMEPE
LYFIEYSRCILECQLHLLLSYGVALEAQQQNTLVVFQSHRPVGLVIRDLGGIRVCFNSLYETTPKPNLHPDSTISCHELS
DLFNTFIYGNLLSNLTFCINCLHDNYNLNKKNLWILLKQIANQLLQNFKKEINPLIYQKFQQHLFSLPWQHKSLLSMRLN
QNQDNLVFFSLDNPLSQDNE
>Mature_579_residues
AAVLNNSYKINNSLHSLLLEKDLLVSQSEMEHFISIAHQQCLDRLQQAALREGLIDKEITSLHIHDYLDLLYHQQNKQKP
EKTFDRWPLLKKELDESINNQALALAYYHCWQQSLKQQAKNHSSLWSWLSEQHNKQQILTFLEQWGCIGHPYHPNFRAKM
GFIPEEVIRYSPEFNAQVDIPWLAIHRSEAFTSIDATSYSLLFAQHFAKEYQLWNYSVQKQQLDPEQYLPLPVHPWQWNN
KLQTLASVLINSKQLLITEAFQKTKPSMSFRTMMPLDNKGPHLKLATAIHTTSALRTVSPASVSNSSPLSSWLRQLLTQY
QSFEKPLFLARDLAGINTTHPSISPQNKKHLAMIVRENPLELIDASQILAPVAALYALSPVSQRALFIEIIETSGMEPEL
YFIEYSRCILECQLHLLLSYGVALEAQQQNTLVVFQSHRPVGLVIRDLGGIRVCFNSLYETTPKPNLHPDSTISCHELSD
LFNTFIYGNLLSNLTFCINCLHDNYNLNKKNLWILLKQIANQLLQNFKKEINPLIYQKFQQHLFSLPWQHKSLLSMRLNQ
NQDNLVFFSLDNPLSQDNE

Specific function: Unknown

COG id: COG4264

COG function: function code Q; Siderophore synthetase component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007310
- InterPro:   IPR022770 [H]

Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]

EC number: NA

Molecular weight: Translated: 67092; Mature: 66960

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVLNNSYKINNSLHSLLLEKDLLVSQSEMEHFISIAHQQCLDRLQQAALREGLIDKEI
CCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TSLHIHDYLDLLYHQQNKQKPEKTFDRWPLLKKELDESINNQALALAYYHCWQQSLKQQA
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KNHSSLWSWLSEQHNKQQILTFLEQWGCIGHPYHPNFRAKMGFIPEEVIRYSPEFNAQVD
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEC
IPWLAIHRSEAFTSIDATSYSLLFAQHFAKEYQLWNYSVQKQQLDPEQYLPLPVHPWQWN
CCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCCCCCCCCC
NKLQTLASVLINSKQLLITEAFQKTKPSMSFRTMMPLDNKGPHLKLATAIHTTSALRTVS
CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHCCC
PASVSNSSPLSSWLRQLLTQYQSFEKPLFLARDLAGINTTHPSISPQNKKHLAMIVRENP
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC
LELIDASQILAPVAALYALSPVSQRALFIEIIETSGMEPELYFIEYSRCILECQLHLLLS
HHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHH
YGVALEAQQQNTLVVFQSHRPVGLVIRDLGGIRVCFNSLYETTPKPNLHPDSTISCHELS
HCCEEEECCCCEEEEEECCCCCEEHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
DLFNTFIYGNLLSNLTFCINCLHDNYNLNKKNLWILLKQIANQLLQNFKKEINPLIYQKF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQHLFSLPWQHKSLLSMRLNQNQDNLVFFSLDNPLSQDNE
HHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
AAVLNNSYKINNSLHSLLLEKDLLVSQSEMEHFISIAHQQCLDRLQQAALREGLIDKEI
CCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TSLHIHDYLDLLYHQQNKQKPEKTFDRWPLLKKELDESINNQALALAYYHCWQQSLKQQA
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KNHSSLWSWLSEQHNKQQILTFLEQWGCIGHPYHPNFRAKMGFIPEEVIRYSPEFNAQVD
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEC
IPWLAIHRSEAFTSIDATSYSLLFAQHFAKEYQLWNYSVQKQQLDPEQYLPLPVHPWQWN
CCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCCCCCCCCC
NKLQTLASVLINSKQLLITEAFQKTKPSMSFRTMMPLDNKGPHLKLATAIHTTSALRTVS
CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHCCC
PASVSNSSPLSSWLRQLLTQYQSFEKPLFLARDLAGINTTHPSISPQNKKHLAMIVRENP
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC
LELIDASQILAPVAALYALSPVSQRALFIEIIETSGMEPELYFIEYSRCILECQLHLLLS
HHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHH
YGVALEAQQQNTLVVFQSHRPVGLVIRDLGGIRVCFNSLYETTPKPNLHPDSTISCHELS
HCCEEEECCCCEEEEEECCCCCEEHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
DLFNTFIYGNLLSNLTFCINCLHDNYNLNKKNLWILLKQIANQLLQNFKKEINPLIYQKF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQHLFSLPWQHKSLLSMRLNQNQDNLVFFSLDNPLSQDNE
HHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]