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The map label for this gene is 54294215

Identifier: 54294215

GI number: 54294215

Start: 1428479

End: 1429513

Strand: Reverse

Name: 54294215

Synonym: lpl1280

Alternate gene names: NA

Gene position: 1429513-1428479 (Counterclockwise)

Preceding gene: 54294217

Following gene: 54294214

Centisome position: 42.73

GC content: 34.4

Gene sequence:

>1035_bases
ATGTTGAATGTTACCGGGTTAGCTTTTGCAGACGCTGGAGACTCTTTATTTAAAAATGAAAAATTGACCTACGATGGGCA
TCTGTTTTTTAATGCCGCCAACTCAACAATACAAGGTGAAAAATATTTACTGAATCAGCAGCTATCCAATATCAAAATGG
GGTCTGAATTACAGGTGACTGATTGGAACAAAATGAAAGGCTTGCTAATTTATAACACCTTGCCTACCCCAGTGTCTCCT
CAATTTTATTTTGAGCAATTTTATGACGAACTCCAAATAGAGTCTTCAAATATTTTCCTTGCATTTGGAAAAAAATGGCT
CACATTTGGAAATTATAAAAGTGATTTAATTTATAAACCACTTACAAAAGCCTTGGGACAAACCAACGAAGTGACCGCTA
TTATTGGATACGATTCCTTGTATTATGCTAACGCTTCTTTTTTTAAACCCTATTCTCGCATAAGTACATCATCACTTCCG
CTTTATTACAATCTGAATACAGGAGTACATAATCAATCAATGGATGCAGGAGTCAGTTATTTATACTCTCTGGCAGAAAG
TCAATTATTTCAATACAACAAAGGTTTTGGCGGGCTTTTATCACAATCATTAAAAACAAGGGTTCCAGGATTTGCAACCT
ATTTTAATTTAAAATATAAAAAAACAAGCACTTATCTCACCTATGTTACTGCAATCACCCCTTTTGCATTAGAAGACATG
AGTTATAACAATCGAAGAGCATCGCCAAAGGCATTGAGCATACAAAATAGTTATGATGCTAATATTAAAAAATTTTCTTT
TAAAATCACTGGTTTTTATGACTACACTTTTCAAGCTCTGGCACTTGGAATACCGAAACAAAGACTGGGACTGGGATTGT
CCGCAACCCCTTTTCCTTATCTTGGTATTCAATTTCAGTATTCCAGAGACTATAGTTATGGAAATACTGCCATAGCATCG
GGAATCAATCATTTTGTAAATGGCCGTAATACAAAAATGAATAATTTGGCATTACAAACCATACTGAATTTTTAA

Upstream 100 bases:

>100_bases
TTTTGTTTTAAATGATAATGATTATCATTTTTATTTAAAATAAAACCAAATGCTGTATATAAGAAATTACATTAGGACAA
GAATTATTTTAGGAATATTA

Downstream 100 bases:

>100_bases
ATTCAGGTACTCAATCAAAAATAAAAAAACTATCTCTCTATTATTTAAGCAAATAAATCACAATACATTGTTGCAAATGA
TAATCATTATCATTTATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MLNVTGLAFADAGDSLFKNEKLTYDGHLFFNAANSTIQGEKYLLNQQLSNIKMGSELQVTDWNKMKGLLIYNTLPTPVSP
QFYFEQFYDELQIESSNIFLAFGKKWLTFGNYKSDLIYKPLTKALGQTNEVTAIIGYDSLYYANASFFKPYSRISTSSLP
LYYNLNTGVHNQSMDAGVSYLYSLAESQLFQYNKGFGGLLSQSLKTRVPGFATYFNLKYKKTSTYLTYVTAITPFALEDM
SYNNRRASPKALSIQNSYDANIKKFSFKITGFYDYTFQALALGIPKQRLGLGLSATPFPYLGIQFQYSRDYSYGNTAIAS
GINHFVNGRNTKMNNLALQTILNF

Sequences:

>Translated_344_residues
MLNVTGLAFADAGDSLFKNEKLTYDGHLFFNAANSTIQGEKYLLNQQLSNIKMGSELQVTDWNKMKGLLIYNTLPTPVSP
QFYFEQFYDELQIESSNIFLAFGKKWLTFGNYKSDLIYKPLTKALGQTNEVTAIIGYDSLYYANASFFKPYSRISTSSLP
LYYNLNTGVHNQSMDAGVSYLYSLAESQLFQYNKGFGGLLSQSLKTRVPGFATYFNLKYKKTSTYLTYVTAITPFALEDM
SYNNRRASPKALSIQNSYDANIKKFSFKITGFYDYTFQALALGIPKQRLGLGLSATPFPYLGIQFQYSRDYSYGNTAIAS
GINHFVNGRNTKMNNLALQTILNF
>Mature_344_residues
MLNVTGLAFADAGDSLFKNEKLTYDGHLFFNAANSTIQGEKYLLNQQLSNIKMGSELQVTDWNKMKGLLIYNTLPTPVSP
QFYFEQFYDELQIESSNIFLAFGKKWLTFGNYKSDLIYKPLTKALGQTNEVTAIIGYDSLYYANASFFKPYSRISTSSLP
LYYNLNTGVHNQSMDAGVSYLYSLAESQLFQYNKGFGGLLSQSLKTRVPGFATYFNLKYKKTSTYLTYVTAITPFALEDM
SYNNRRASPKALSIQNSYDANIKKFSFKITGFYDYTFQALALGIPKQRLGLGLSATPFPYLGIQFQYSRDYSYGNTAIAS
GINHFVNGRNTKMNNLALQTILNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0422 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38873; Mature: 38873

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVTGLAFADAGDSLFKNEKLTYDGHLFFNAANSTIQGEKYLLNQQLSNIKMGSELQVT
CCEECEEEEECCCCHHHCCCCEEECCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEE
DWNKMKGLLIYNTLPTPVSPQFYFEQFYDELQIESSNIFLAFGKKWLTFGNYKSDLIYKP
CHHHCCCEEEEECCCCCCCCHHHHHHHHHHHEEECCCEEEEECCEEEEECCCCCCCEEHH
LTKALGQTNEVTAIIGYDSLYYANASFFKPYSRISTSSLPLYYNLNTGVHNQSMDAGVSY
HHHHCCCCCCEEEEEECCEEEECCCHHCCCHHHCCCCCCCEEEECCCCCCCCCHHHHHHH
LYSLAESQLFQYNKGFGGLLSQSLKTRVPGFATYFNLKYKKTSTYLTYVTAITPFALEDM
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEHHCCHHEECC
SYNNRRASPKALSIQNSYDANIKKFSFKITGFYDYTFQALALGIPKQRLGLGLSATPFPY
CCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEEHHHHHHHHHCCCHHHHCCCCCCCCCCE
LGIQFQYSRDYSYGNTAIASGINHFVNGRNTKMNNLALQTILNF
EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLNVTGLAFADAGDSLFKNEKLTYDGHLFFNAANSTIQGEKYLLNQQLSNIKMGSELQVT
CCEECEEEEECCCCHHHCCCCEEECCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEE
DWNKMKGLLIYNTLPTPVSPQFYFEQFYDELQIESSNIFLAFGKKWLTFGNYKSDLIYKP
CHHHCCCEEEEECCCCCCCCHHHHHHHHHHHEEECCCEEEEECCEEEEECCCCCCCEEHH
LTKALGQTNEVTAIIGYDSLYYANASFFKPYSRISTSSLPLYYNLNTGVHNQSMDAGVSY
HHHHCCCCCCEEEEEECCEEEECCCHHCCCHHHCCCCCCCEEEECCCCCCCCCHHHHHHH
LYSLAESQLFQYNKGFGGLLSQSLKTRVPGFATYFNLKYKKTSTYLTYVTAITPFALEDM
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEHHCCHHEECC
SYNNRRASPKALSIQNSYDANIKKFSFKITGFYDYTFQALALGIPKQRLGLGLSATPFPY
CCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEEHHHHHHHHHCCCHHHHCCCCCCCCCCE
LGIQFQYSRDYSYGNTAIASGINHFVNGRNTKMNNLALQTILNF
EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]