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The map label for this gene is 54294198

Identifier: 54294198

GI number: 54294198

Start: 1405779

End: 1406246

Strand: Reverse

Name: 54294198

Synonym: lpl1263

Alternate gene names: NA

Gene position: 1406246-1405779 (Counterclockwise)

Preceding gene: 54294199

Following gene: 54294197

Centisome position: 42.03

GC content: 37.18

Gene sequence:

>468_bases
ATGCTCTATTTCTATTTAAAGTTTATCCACGTGCTGAGTTCAACAATACTTTTTGGTACAGGTATAGGAACAGCAAGTGT
GATGATTTATGGCCATAGAACAAAAAATCCGATTGTTATTGCTGCCATTTCAAAATATGTGGTTTTTGCTGATTGGATAT
TCACTGGTACATCTGGAATATTACAACCGCTCACAGGGTTTGCCATGATTTACCTTGCTGGATTTTCCTGGACTTCTTTA
TGGATACTGGGATCAATTCTTGGATATGTCGTTGCGGCATGTTGTTGGTTTCCTGTCGTCTGCCTGCAAATCAAAATGAG
GGATTTAGCCATAGAGACCGTAAAAAATAACACGACTTTACCAGAGAAATATCACCGATATTTTCTTTATTGGTTTATTC
TGGGTTGGCCAGCATTCTTAAGCCTTGTTGGAGTATTTTATTTGATGACTAATAAGCCTGTTTTTTAA

Upstream 100 bases:

>100_bases
AACTGCCTTACCTTTGGTTAGATCCATTTGCTCCCATAGCCAAGAACATTCCTTTGTTAATAGCTATTTTAATAGGTCTG
GGTTTGGAGTCTGATAAATA

Downstream 100 bases:

>100_bases
ATAGCAAAGATGAATATTAAGAGATTGGGATGGCGTAATTTTTGTGTTATTTGTTACTTTAATTGATCCAGTAACTGCCT
GGCTTGCTCTTTTTGATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein; Transmembrane Protein; Integral Membrane Protein-Like; Integral Membrane-Like Protein; Exonuclease VII Large Subunit

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGILQPLTGFAMIYLAGFSWTSL
WILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTLPEKYHRYFLYWFILGWPAFLSLVGVFYLMTNKPVF

Sequences:

>Translated_155_residues
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGILQPLTGFAMIYLAGFSWTSL
WILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTLPEKYHRYFLYWFILGWPAFLSLVGVFYLMTNKPVF
>Mature_155_residues
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGILQPLTGFAMIYLAGFSWTSL
WILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTLPEKYHRYFLYWFILGWPAFLSLVGVFYLMTNKPVF

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17622; Mature: 17622

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGI
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCHHH
LQPLTGFAMIYLAGFSWTSLWILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PEKYHRYFLYWFILGWPAFLSLVGVFYLMTNKPVF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLYFYLKFIHVLSSTILFGTGIGTASVMIYGHRTKNPIVIAAISKYVVFADWIFTGTSGI
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCHHH
LQPLTGFAMIYLAGFSWTSLWILGSILGYVVAACCWFPVVCLQIKMRDLAIETVKNNTTL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PEKYHRYFLYWFILGWPAFLSLVGVFYLMTNKPVF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA