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The map label for this gene is ybjT [C]

Identifier: 54294199

GI number: 54294199

Start: 1406246

End: 1407544

Strand: Reverse

Name: ybjT [C]

Synonym: lpl1264

Alternate gene names: 54294199

Gene position: 1407544-1406246 (Counterclockwise)

Preceding gene: 54294208

Following gene: 54294198

Centisome position: 42.07

GC content: 36.95

Gene sequence:

>1299_bases
ATGAAAATTCTGGTAACAGGCGCATCTGGGTTTATCGCTTCGCAGTTTGTTACCGATCTGCTGATTGCTGGACATGAAAT
CATTTGTTGTGTACGGAATACCAAACACACGCAAAGGATTTTTCCTGGGGCACAAGTTATCTTTTGTGATTTTATCAATG
ATACAAAACCTGAAATCTGGTCAAAAAGATTGCAGGGGATTGATGTGGTTATTAATTGTGTAGGGATTTTATACCACCCT
GATGAGAGAATCATATGGAATGTCCATTATGAAACTCCAAAAGCACTTTTTGATGCGTGTATAAACTCTGGGGTAAAAAA
AATTATTCAAATCTCTGCTTTGGGAATTGATAAAGTTGATGTGAATTATGCTGCGAGTAAAAAAGCGATAGATGATTACT
TACTGACACTCTCTATCCCGTCAGTTATAGTAAGACCCTCTTATGTGTATGGAAAAGGCTCTTATGGAGGGTCTTCTCTA
TTCAGAGGGATTGCTGGAACACCTTTTTTTACCGCTATACCTGGGCAAGGGACACAAAAATTTCAACCTATCTCTCTAAA
TGACCTATCTCAGGCAATAGTACGATTGGTGAGTACGCCTGTAACCGAAACTATTATTTTGCATGCCGTAAGCAAAAAAA
TAATCACGTTAGAAGAAATAATAATAAAACTGCGCTCCTGGCTTGGGTTCACCAAAACCAGAATAATACATATTCCATTG
ACATTTATTCGACTATTGACCCGGCTTGGTGATTTGCTCCCCTATTCAACTATAAATACTGTTTCGTATAAAATGCTTGC
CAGTGATAACATTACTACTCAGGAAGAAACACAGCGATTTGCTGATTATGTTAACTTTACTCCAAGAGACTATGAAGAAG
GTCTCTATAGTCAACCGAGTTCAGTCCAAGACCATTGGCATGCGCAATTATACTTTCTTAAACTTCCCCTAAGACTCGGC
ATATCCTTTGTCTGGATTTGGACAGCCTTATGTTGTTTGTTTTTTTACCCTAAAAGTGACTCATTATCTTTGTTTGCTCA
AATAGGTTTTTCATCCTTATGGCAGTTATTCTTATTTTATGCTTCAACTTTATGGGATAGCCTTTTAGGTATAGCCATGT
TGTTTAATTATCGATTTAAATTGACCAGTAAATTGCAACTGATTACGATTTTGGTATATACAGTGATTATTACCATCAAA
CTGCCTTACCTTTGGTTAGATCCATTTGCTCCCATAGCCAAGAACATTCCTTTGTTAATAGCTATTTTAATAGGTCTGGG
TTTGGAGTCTGATAAATAA

Upstream 100 bases:

>100_bases
GTGTTGATTAAAATTAAGCCTGGTGAGGAAATTTGAATAGTAGGAGTTAAATTCGTTATAGTATTTCTATTATAATTGTA
ATCAAAAATAAGAGAGCCTT

Downstream 100 bases:

>100_bases
TGCTCTATTTCTATTTAAAGTTTATCCACGTGCTGAGTTCAACAATACTTTTTGGTACAGGTATAGGAACAGCAAGTGTG
ATGATTTATGGCCATAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Oxidoreductase Protein; NADH Dehydrogenase; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-4-Dehydrorhamnose Reductase; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; Transmembrane Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerase Protein

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIWSKRLQGIDVVINCVGILYHP
DERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVDVNYAASKKAIDDYLLTLSIPSVIVRPSYVYGKGSYGGSSL
FRGIAGTPFFTAIPGQGTQKFQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPSSVQDHWHAQLYFLKLPLRLG
ISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFYASTLWDSLLGIAMLFNYRFKLTSKLQLITILVYTVIITIK
LPYLWLDPFAPIAKNIPLLIAILIGLGLESDK

Sequences:

>Translated_432_residues
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIWSKRLQGIDVVINCVGILYHP
DERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVDVNYAASKKAIDDYLLTLSIPSVIVRPSYVYGKGSYGGSSL
FRGIAGTPFFTAIPGQGTQKFQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPSSVQDHWHAQLYFLKLPLRLG
ISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFYASTLWDSLLGIAMLFNYRFKLTSKLQLITILVYTVIITIK
LPYLWLDPFAPIAKNIPLLIAILIGLGLESDK
>Mature_432_residues
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIWSKRLQGIDVVINCVGILYHP
DERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVDVNYAASKKAIDDYLLTLSIPSVIVRPSYVYGKGSYGGSSL
FRGIAGTPFFTAIPGQGTQKFQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPSSVQDHWHAQLYFLKLPLRLG
ISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFYASTLWDSLLGIAMLFNYRFKLTSKLQLITILVYTVIITIK
LPYLWLDPFAPIAKNIPLLIAILIGLGLESDK

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48753; Mature: 48753

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIW
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCEEEEEECCCCCCHHHH
SKRLQGIDVVINCVGILYHPDERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVD
HHHHCCHHHHEEEEHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEC
VNYAASKKAIDDYLLTLSIPSVIVRPSYVYGKGSYGGSSLFRGIAGTPFFTAIPGQGTQK
CCHHHHHHHHHHHHEEEECCHHHCCCCEEEECCCCCHHHHHHHCCCCCCEEECCCCCCCC
FQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECH
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPS
HHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCC
SVQDHWHAQLYFLKLPLRLGISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFY
CHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
ASTLWDSLLGIAMLFNYRFKLTSKLQLITILVYTVIITIKLPYLWLDPFAPIAKNIPLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCHHHH
AILIGLGLESDK
HHHHHCCCCCCC
>Mature Secondary Structure
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIW
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCEEEEEECCCCCCHHHH
SKRLQGIDVVINCVGILYHPDERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVD
HHHHCCHHHHEEEEHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEC
VNYAASKKAIDDYLLTLSIPSVIVRPSYVYGKGSYGGSSLFRGIAGTPFFTAIPGQGTQK
CCHHHHHHHHHHHHEEEECCHHHCCCCEEEECCCCCHHHHHHHCCCCCCEEECCCCCCCC
FQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECH
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPS
HHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCC
SVQDHWHAQLYFLKLPLRLGISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFY
CHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
ASTLWDSLLGIAMLFNYRFKLTSKLQLITILVYTVIITIKLPYLWLDPFAPIAKNIPLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCHHHH
AILIGLGLESDK
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA