Click here to switch to the map view.

The map label for this gene is 54294197

Identifier: 54294197

GI number: 54294197

Start: 1402453

End: 1402653

Strand: Reverse

Name: 54294197

Synonym: lpl1261

Alternate gene names: NA

Gene position: 1402653-1402453 (Counterclockwise)

Preceding gene: 54294198

Following gene: 54294196

Centisome position: 41.92

GC content: 33.33

Gene sequence:

>201_bases
ATGAATAGAGAAAATGAAGTGATCGAAATATTTCTAATGGATATCAGCAAAAAGGAAAAATGCAAATTGTTACAAGATTT
TCTTCTGGATTGCAAAAATGAAATGGAAGCCCAGGATCAGAACATGCATCCTGAAGTGCATCACAATTTATCGCAAGCTT
ATCAGCTGGCGCAAAATTATTTAAGAAAACTGCAAGAATAA

Upstream 100 bases:

>100_bases
ATTGTGGTCTTTTAAAATTCAACCAGGAAAATTCATAACTCCAATAGACCTTCAACTATAATTATATTTAAGGATTAGTA
AAATTAAACTTGGAATAGCG

Downstream 100 bases:

>100_bases
GTGTATTTTCCTTGTTGCATATGAATCATATTGCATTAGAATAACCCGTAATTCATAATGTACTCCATAAAAATTGCGAG
AAGAAAATGCCTGCATCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MNRENEVIEIFLMDISKKEKCKLLQDFLLDCKNEMEAQDQNMHPEVHHNLSQAYQLAQNYLRKLQE

Sequences:

>Translated_66_residues
MNRENEVIEIFLMDISKKEKCKLLQDFLLDCKNEMEAQDQNMHPEVHHNLSQAYQLAQNYLRKLQE
>Mature_66_residues
MNRENEVIEIFLMDISKKEKCKLLQDFLLDCKNEMEAQDQNMHPEVHHNLSQAYQLAQNYLRKLQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7978; Mature: 7978

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRENEVIEIFLMDISKKEKCKLLQDFLLDCKNEMEAQDQNMHPEVHHNLSQAYQLAQNY
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LRKLQE
HHHHCC
>Mature Secondary Structure
MNRENEVIEIFLMDISKKEKCKLLQDFLLDCKNEMEAQDQNMHPEVHHNLSQAYQLAQNY
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LRKLQE
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA