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The map label for this gene is yfbS [C]

Identifier: 54294174

GI number: 54294174

Start: 1379912

End: 1381684

Strand: Reverse

Name: yfbS [C]

Synonym: lpl1238

Alternate gene names: 54294174

Gene position: 1381684-1379912 (Counterclockwise)

Preceding gene: 54294175

Following gene: 54294159

Centisome position: 41.3

GC content: 38.13

Gene sequence:

>1773_bases
ATGTACCAGCCTTATCTTTTATTTGCCGTTTTAATTCTTTCTCTCATTTTATTTTTTTGGAATTATTGGAGATACGATTT
TGTTGCCCTGTTTGCACTGGCCATATCAGTATTGACCGGCCTTGTTCCTTTTAACAAGGCATTTTCAGGATTCAGTAACC
CGGCAGTAATAACAGTCGGCTGTGTCATGATCTTAACTTATGCCATCACCCAATCAGGCATATTAAATGATTTCTTTATA
AAATTAAAAAAATCTTCAAAAAAAACATCATTTCAAGTCGGTCTTTATAGTGGCATCAGTGCATTTCTGTCTGCTTTTAT
GAATAATGTAGGCGCATTAGGGATAATGATGCCAATCACCATTCATGCTTTTACAGAAATTAAAAAATCGCCATCTATCA
TCTTAATGCCTATTGCCTTTTGCTCAGTTTTGGGAGGTGTAATCACTGCCATAGGTACCCCTCCCAACCTATTAATTTCC
AACTTCCGCAATCAAGTCCTGGGTACCCCATACAATATGTTCGATTTTACTCCCGTGGGGCTTCCGGTAGCATTGATGGG
TGTTCTCTTTGTTTCATTGATTGGATGGAAATTAGTTCCAGTGCGGGCCAAGTATAGTAAATCGGGAGATTCATTCCAGA
TTTCTGATTACATGACCGAAGTAAAAGTTCCTGAAACCTCTTCTATGTGCGAAAAGACTGTTAAAGAGTTTCTTGAGATG
ACTAAAGCGAACTTTGAACTGATAGCAGTTGCGCATGAAGGTAAAAAAAAATTTGCATACACTGATGATACGATCATTCA
TTGCAACGATATTTTAATTATTGAAGCGTCTCCTGAAGATTTGAAAAACATTTTGGATTCAAATGGTCTAATCCTCGCTG
GCAACAAACCATTAACCTCTAAAGAACTCTACGACAGTGATATCATCACTATGGAAGCTGTTGTATTACCGGATTCCAGC
ATTGAAGGACAATCCGCTTCCATGATGAGATTTCGTTCACGTCATAAGATTAATTTGTTAGCTATTTCAAGAGAAGAATT
ATCGTTTAGAAAAAAATTAATTGATATTCGTTTCGCAGCAGGAGATGTGGTACTACTTCAGGGAAATGCCGCAACACTTC
GCGAAACAATTGTCGACATGGGGTTCTTGCCCCTTGCAGAAAGAGATATTAATGTCCATTTGACACAAAAAAAATTTCTA
CCAATCATTTGTTTTACACTATCCATCATTTTGGCATCTCTGCAAATACTACCACTCGACTTTTCTTTTATGATAGCAGT
GCTCGCACTCATTCTATTAAAAGCAATACCAACACACAGTTTGTATCGTACTATTGATTGGTCGGTACTATTATTATTAG
CTGCTCTTATCCCTGTTGGAGAAGCTTTGCAAACGACTGGTGCCGCAGATTTGATTGCAAATGGATTTATGAAAATTGCC
GGGCAATATTCCCCTGTCTTTGCCTTGGTTGCAATTCTGGTTATCACTATGACTTTATCTGATTTATTAAACAACGCAGC
AACAGCATTAATTATGGCTCCCATTGCAATCAAGATTGCTCAGTCAGCGCATGTTAATGTGGATTCTTTCTTAATGGCAG
TGGCTATTGGTGCTTCGTGTTCCTTCCTGACTCCAATTGCCCATCAGAACAACACAATGGTTATGGGTCCAGGAAGATAC
CGATTTTCTGATTATTTCCGTTTGGGATTACCATTAGAACTCCTTGTTGTAGTCGTTACTATTCCAACTATTTTATGGGT
ATGGCCATTATAA

Upstream 100 bases:

>100_bases
TCAGGAATGTAACCAATCAAACTCAAATAATGTTTTTGGGTAGAGTCCTGTAATTATTAGCAGGGATGTTGATATAAAAC
ATGAAAATAAGGATTATTAC

Downstream 100 bases:

>100_bases
AAATAGAAATTAATATGAATTAAACCTGTACCATAATCGATAAAACACAATGGTACAGGTTAGAGATATTTGAATAGACG
CAAATGGTATATTGCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MYQPYLLFAVLILSLILFFWNYWRYDFVALFALAISVLTGLVPFNKAFSGFSNPAVITVGCVMILTYAITQSGILNDFFI
KLKKSSKKTSFQVGLYSGISAFLSAFMNNVGALGIMMPITIHAFTEIKKSPSIILMPIAFCSVLGGVITAIGTPPNLLIS
NFRNQVLGTPYNMFDFTPVGLPVALMGVLFVSLIGWKLVPVRAKYSKSGDSFQISDYMTEVKVPETSSMCEKTVKEFLEM
TKANFELIAVAHEGKKKFAYTDDTIIHCNDILIIEASPEDLKNILDSNGLILAGNKPLTSKELYDSDIITMEAVVLPDSS
IEGQSASMMRFRSRHKINLLAISREELSFRKKLIDIRFAAGDVVLLQGNAATLRETIVDMGFLPLAERDINVHLTQKKFL
PIICFTLSIILASLQILPLDFSFMIAVLALILLKAIPTHSLYRTIDWSVLLLLAALIPVGEALQTTGAADLIANGFMKIA
GQYSPVFALVAILVITMTLSDLLNNAATALIMAPIAIKIAQSAHVNVDSFLMAVAIGASCSFLTPIAHQNNTMVMGPGRY
RFSDYFRLGLPLELLVVVVTIPTILWVWPL

Sequences:

>Translated_590_residues
MYQPYLLFAVLILSLILFFWNYWRYDFVALFALAISVLTGLVPFNKAFSGFSNPAVITVGCVMILTYAITQSGILNDFFI
KLKKSSKKTSFQVGLYSGISAFLSAFMNNVGALGIMMPITIHAFTEIKKSPSIILMPIAFCSVLGGVITAIGTPPNLLIS
NFRNQVLGTPYNMFDFTPVGLPVALMGVLFVSLIGWKLVPVRAKYSKSGDSFQISDYMTEVKVPETSSMCEKTVKEFLEM
TKANFELIAVAHEGKKKFAYTDDTIIHCNDILIIEASPEDLKNILDSNGLILAGNKPLTSKELYDSDIITMEAVVLPDSS
IEGQSASMMRFRSRHKINLLAISREELSFRKKLIDIRFAAGDVVLLQGNAATLRETIVDMGFLPLAERDINVHLTQKKFL
PIICFTLSIILASLQILPLDFSFMIAVLALILLKAIPTHSLYRTIDWSVLLLLAALIPVGEALQTTGAADLIANGFMKIA
GQYSPVFALVAILVITMTLSDLLNNAATALIMAPIAIKIAQSAHVNVDSFLMAVAIGASCSFLTPIAHQNNTMVMGPGRY
RFSDYFRLGLPLELLVVVVTIPTILWVWPL
>Mature_590_residues
MYQPYLLFAVLILSLILFFWNYWRYDFVALFALAISVLTGLVPFNKAFSGFSNPAVITVGCVMILTYAITQSGILNDFFI
KLKKSSKKTSFQVGLYSGISAFLSAFMNNVGALGIMMPITIHAFTEIKKSPSIILMPIAFCSVLGGVITAIGTPPNLLIS
NFRNQVLGTPYNMFDFTPVGLPVALMGVLFVSLIGWKLVPVRAKYSKSGDSFQISDYMTEVKVPETSSMCEKTVKEFLEM
TKANFELIAVAHEGKKKFAYTDDTIIHCNDILIIEASPEDLKNILDSNGLILAGNKPLTSKELYDSDIITMEAVVLPDSS
IEGQSASMMRFRSRHKINLLAISREELSFRKKLIDIRFAAGDVVLLQGNAATLRETIVDMGFLPLAERDINVHLTQKKFL
PIICFTLSIILASLQILPLDFSFMIAVLALILLKAIPTHSLYRTIDWSVLLLLAALIPVGEALQTTGAADLIANGFMKIA
GQYSPVFALVAILVITMTLSDLLNNAATALIMAPIAIKIAQSAHVNVDSFLMAVAIGASCSFLTPIAHQNNTMVMGPGRY
RFSDYFRLGLPLELLVVVVTIPTILWVWPL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=624, Percent_Identity=26.4423076923077, Blast_Score=216, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 64799; Mature: 64799

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQPYLLFAVLILSLILFFWNYWRYDFVALFALAISVLTGLVPFNKAFSGFSNPAVITVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHH
CVMILTYAITQSGILNDFFIKLKKSSKKTSFQVGLYSGISAFLSAFMNNVGALGIMMPIT
HHHHHHHHHHHCCCHHHHHHHEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH
IHAFTEIKKSPSIILMPIAFCSVLGGVITAIGTPPNLLISNFRNQVLGTPYNMFDFTPVG
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
LPVALMGVLFVSLIGWKLVPVRAKYSKSGDSFQISDYMTEVKVPETSSMCEKTVKEFLEM
HHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHH
TKANFELIAVAHEGKKKFAYTDDTIIHCNDILIIEASPEDLKNILDSNGLILAGNKPLTS
HCCCEEEEEEEECCCCCEEECCCCEEEECEEEEEECCHHHHHHHHCCCCEEEECCCCCCC
KELYDSDIITMEAVVLPDSSIEGQSASMMRFRSRHKINLLAISREELSFRKKLIDIRFAA
HHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHEEEEC
GDVVLLQGNAATLRETIVDMGFLPLAERDINVHLTQKKFLPIICFTLSIILASLQILPLD
CCEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
FSFMIAVLALILLKAIPTHSLYRTIDWSVLLLLAALIPVGEALQTTGAADLIANGFMKIA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHC
GQYSPVFALVAILVITMTLSDLLNNAATALIMAPIAIKIAQSAHVNVDSFLMAVAIGASC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCC
SFLTPIAHQNNTMVMGPGRYRFSDYFRLGLPLELLVVVVTIPTILWVWPL
CCCCCCCCCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYQPYLLFAVLILSLILFFWNYWRYDFVALFALAISVLTGLVPFNKAFSGFSNPAVITVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHH
CVMILTYAITQSGILNDFFIKLKKSSKKTSFQVGLYSGISAFLSAFMNNVGALGIMMPIT
HHHHHHHHHHHCCCHHHHHHHEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH
IHAFTEIKKSPSIILMPIAFCSVLGGVITAIGTPPNLLISNFRNQVLGTPYNMFDFTPVG
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
LPVALMGVLFVSLIGWKLVPVRAKYSKSGDSFQISDYMTEVKVPETSSMCEKTVKEFLEM
HHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHH
TKANFELIAVAHEGKKKFAYTDDTIIHCNDILIIEASPEDLKNILDSNGLILAGNKPLTS
HCCCEEEEEEEECCCCCEEECCCCEEEECEEEEEECCHHHHHHHHCCCCEEEECCCCCCC
KELYDSDIITMEAVVLPDSSIEGQSASMMRFRSRHKINLLAISREELSFRKKLIDIRFAA
HHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHEEEEC
GDVVLLQGNAATLRETIVDMGFLPLAERDINVHLTQKKFLPIICFTLSIILASLQILPLD
CCEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
FSFMIAVLALILLKAIPTHSLYRTIDWSVLLLLAALIPVGEALQTTGAADLIANGFMKIA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHC
GQYSPVFALVAILVITMTLSDLLNNAATALIMAPIAIKIAQSAHVNVDSFLMAVAIGASC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCC
SFLTPIAHQNNTMVMGPGRYRFSDYFRLGLPLELLVVVVTIPTILWVWPL
CCCCCCCCCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]