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The map label for this gene is ycgS [H]

Identifier: 54294120

GI number: 54294120

Start: 1322467

End: 1323402

Strand: Reverse

Name: ycgS [H]

Synonym: lpl1184

Alternate gene names: 54294120

Gene position: 1323402-1322467 (Counterclockwise)

Preceding gene: 54294121

Following gene: 54294113

Centisome position: 39.56

GC content: 40.81

Gene sequence:

>936_bases
ATGAATGAAACTCAAGAATTCTTGCGTCAAAAACTGAATTCGCCGTTACCTATTTCACGACCTCAATTGGCAAAGCTGCC
AATGGGTACTATGGAGTTCGTTACTTATGGTAATGGAAAACCCGTACTGATTATTCATGGTGGAGGGGGTGGTTATGATC
AGGCAGTGCTTTTATTCAAACGCTATATCCCCGATGGTTACCAAATGATTTGTCCTTCTCGTCCCGGTTATTTGGGAACA
CCCATTGATACTGGACAAACGGCAGAAGAACAGGCAGATGCTCTGGCCGGCTTACTGGATTATTTGAATATTCCCAGCGC
AGTTATTGTAGCCATATCAGCTGGCGGGCTTTCTCTGTATCCTTTTGCCATTCGCCACCCGAAAAAAACTAAAGCAATTA
TTGCAATAGATGCTATAGCTGGGGAATATTTAATGCCTGAACAATCCAACAAATTGGCTCAAGCCCTTTTTATGACTGAT
TTTGGTTTATGGATCGCTAAAAAAAGCATGATTTATTTCCCCAAGTCATTTATCAAGAATTTAATTAAACTGGAAGGTTA
CCTGGATCCAGTACGTGTAGATGACCGGGTGAAAGAGATCTTAAATTGTCAGGATCGCCTGGAAATTATTGCTGAACTAA
TGAATAGCATGGCGGACTATAAGGCTCGTAAAACAGGGACCGTGAATGACATGGCAGAGGGTGCAAAAACCAGCTGGTAT
GATTTTTCTAAAATTAACTGCCCTGCACTAATAATTCATGGGACACATGATGCTGATGTAAAATTTTACAATGGTGTATT
TGCTTATGAGCGATTAGCATCGAAAGAAAAAGAGTGCTTCTGGATTGAATACGGCACTCATTTTGGTTTTTTCTTTGCTC
ATCAGGCGCGTAAGGCGCAACAAAAATTTCGGGAATTTGTAATACAGCATGGTTAA

Upstream 100 bases:

>100_bases
CAAAAAGGTCTCTTCATAAATAATTTTCGATATTTTCAGTAGACAAGATCATCTAAAAAGCCAAGTATTAATTTGCTTTC
ACTTTGGATAGGGAGTTGCC

Downstream 100 bases:

>100_bases
ACGGGTTTGATGTTGAAAATTCAGGAAATGGGAGTATAGGTCAGTGCCCTCATGCTTAAATATTCTCTAACGATCAGATT
TGAGTTCAGGTTAGATATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNETQEFLRQKLNSPLPISRPQLAKLPMGTMEFVTYGNGKPVLIIHGGGGGYDQAVLLFKRYIPDGYQMICPSRPGYLGT
PIDTGQTAEEQADALAGLLDYLNIPSAVIVAISAGGLSLYPFAIRHPKKTKAIIAIDAIAGEYLMPEQSNKLAQALFMTD
FGLWIAKKSMIYFPKSFIKNLIKLEGYLDPVRVDDRVKEILNCQDRLEIIAELMNSMADYKARKTGTVNDMAEGAKTSWY
DFSKINCPALIIHGTHDADVKFYNGVFAYERLASKEKECFWIEYGTHFGFFFAHQARKAQQKFREFVIQHG

Sequences:

>Translated_311_residues
MNETQEFLRQKLNSPLPISRPQLAKLPMGTMEFVTYGNGKPVLIIHGGGGGYDQAVLLFKRYIPDGYQMICPSRPGYLGT
PIDTGQTAEEQADALAGLLDYLNIPSAVIVAISAGGLSLYPFAIRHPKKTKAIIAIDAIAGEYLMPEQSNKLAQALFMTD
FGLWIAKKSMIYFPKSFIKNLIKLEGYLDPVRVDDRVKEILNCQDRLEIIAELMNSMADYKARKTGTVNDMAEGAKTSWY
DFSKINCPALIIHGTHDADVKFYNGVFAYERLASKEKECFWIEYGTHFGFFFAHQARKAQQKFREFVIQHG
>Mature_311_residues
MNETQEFLRQKLNSPLPISRPQLAKLPMGTMEFVTYGNGKPVLIIHGGGGGYDQAVLLFKRYIPDGYQMICPSRPGYLGT
PIDTGQTAEEQADALAGLLDYLNIPSAVIVAISAGGLSLYPFAIRHPKKTKAIIAIDAIAGEYLMPEQSNKLAQALFMTD
FGLWIAKKSMIYFPKSFIKNLIKLEGYLDPVRVDDRVKEILNCQDRLEIIAELMNSMADYKARKTGTVNDMAEGAKTSWY
DFSKINCPALIIHGTHDADVKFYNGVFAYERLASKEKECFWIEYGTHFGFFFAHQARKAQQKFREFVIQHG

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34941; Mature: 34941

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETQEFLRQKLNSPLPISRPQLAKLPMGTMEFVTYGNGKPVLIIHGGGGGYDQAVLLFK
CCHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHH
RYIPDGYQMICPSRPGYLGTPIDTGQTAEEQADALAGLLDYLNIPSAVIVAISAGGLSLY
HHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEC
PFAIRHPKKTKAIIAIDAIAGEYLMPEQSNKLAQALFMTDFGLWIAKKSMIYFPKSFIKN
HHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHEECCHHHHHH
LIKLEGYLDPVRVDDRVKEILNCQDRLEIIAELMNSMADYKARKTGTVNDMAEGAKTSWY
HHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
DFSKINCPALIIHGTHDADVKFYNGVFAYERLASKEKECFWIEYGTHFGFFFAHQARKAQ
CCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
QKFREFVIQHG
HHHHHHHHCCC
>Mature Secondary Structure
MNETQEFLRQKLNSPLPISRPQLAKLPMGTMEFVTYGNGKPVLIIHGGGGGYDQAVLLFK
CCHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHH
RYIPDGYQMICPSRPGYLGTPIDTGQTAEEQADALAGLLDYLNIPSAVIVAISAGGLSLY
HHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEC
PFAIRHPKKTKAIIAIDAIAGEYLMPEQSNKLAQALFMTDFGLWIAKKSMIYFPKSFIKN
HHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHEECCHHHHHH
LIKLEGYLDPVRVDDRVKEILNCQDRLEIIAELMNSMADYKARKTGTVNDMAEGAKTSWY
HHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
DFSKINCPALIIHGTHDADVKFYNGVFAYERLASKEKECFWIEYGTHFGFFFAHQARKAQ
CCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
QKFREFVIQHG
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]