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The map label for this gene is 54294074

Identifier: 54294074

GI number: 54294074

Start: 1269104

End: 1270132

Strand: Reverse

Name: 54294074

Synonym: lpl1138

Alternate gene names: NA

Gene position: 1270132-1269104 (Counterclockwise)

Preceding gene: 54294075

Following gene: 54294073

Centisome position: 37.96

GC content: 38.78

Gene sequence:

>1029_bases
ATGCTATGCGCCATGAAAAGACTTTACTTAACACCAGAAGAAAAAGACTATCTTGAACGAGAGCATGCCCTAAAAGAAAA
TGGCAAGGAACGGGATCGAATTAAAGCCATTTTATTACGTTCGGAAGGATGGACAGTTTCCCAAATAAGTCAGGCGCTTC
GTCTGCATCAATCAACAATTATTCGACATGTTCAAGAATATCAAGAAGGTAAACTAAAGAATACAAGCGGTGGTTCTACG
GGTCAATTATCTGAAGAACAAACACAAGAGCTAATTGCTCATTTAGAAGCAAATCTTTATCACCACAATCATCAGATTAT
TCTGTATGTACAAGAGCGTTACGGTGTTACTTACACAATACCAGGAATGCACAAATGGCTGCATCGTAATGGATTTAGCT
ATAAAAAACCCAAGGGCATACCGCATAAGGCAGATGCTCAGTTACAAAAGGAGTTTGTTGCAAAGTACCAGCAACTCAAA
GAAGAATTAGGTGGTAAAGAGCCTATTTTATTCATGGACTCAGTGCACCCAACACAGGCTACAAAACTAGCTTATGGTTG
GATAAGAACTGGCAAAGTAAGACATGTTGGTACAACTGCAAGTCGTACACGATTGAACATTATTGGTGCAATTCAGTTGG
GCCATATTGCAGAAGCAATTACATCACAATACGACACAATTAATGCAGAATCCATCACGGCTTTTATGGATAAAATTCGC
ACCCAGTATGCTGATAAAACAGTCCACTTGATCCTGGATATGGCTCCTTATCATCGTTCTTCATTGGTCGCTGAGCATGC
CTCGAGGCTCAATATAAAACTACACTTTCTACCCCCTTATAGCCCTAATCTCAATCCTATAGAGCGGCTATGGAGAGTGA
TGAATGAACAGGTGAGAAATAATAGATGTTTTAAAGGTGCTAAAGATTTTAAAGAGGCTATTTCTGGCTTTTTCACTGAC
ACGTTGCCATATATTGGAAGTCTTCTTAATGAACGAATTAATGACAACTTTCAATTTTTAAAAACTTAG

Upstream 100 bases:

>100_bases
CCCTGGATAATATATTAGCCTTGGCTCTCTTCTCCTATGCGATAGTCTTATATATACCCGTGATCATTCAAAATGCTTGC
ATTTTTAAATCAAGAAGATC

Downstream 100 bases:

>100_bases
CATTTTGAAGTTTCTTGGGTATATCTGGTTAATTAAAGCATTTTGGGGATCGGCGAATCATTGCTCAAATAAAATTTCAG
CCGTTTTGATTCGTACCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives-Like Protein; Transposase Family Protein; Integrase Catalytic Region; Transposase Related Protein; Transposase And Inactivated Derivatives; Transposase ISC; Family Transposase; Transposase IS; Transposase Of IS; ISRin1 Transposase OrfB; Resolvase Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLCAMKRLYLTPEEKDYLEREHALKENGKERDRIKAILLRSEGWTVSQISQALRLHQSTIIRHVQEYQEGKLKNTSGGST
GQLSEEQTQELIAHLEANLYHHNHQIILYVQERYGVTYTIPGMHKWLHRNGFSYKKPKGIPHKADAQLQKEFVAKYQQLK
EELGGKEPILFMDSVHPTQATKLAYGWIRTGKVRHVGTTASRTRLNIIGAIQLGHIAEAITSQYDTINAESITAFMDKIR
TQYADKTVHLILDMAPYHRSSLVAEHASRLNIKLHFLPPYSPNLNPIERLWRVMNEQVRNNRCFKGAKDFKEAISGFFTD
TLPYIGSLLNERINDNFQFLKT

Sequences:

>Translated_342_residues
MLCAMKRLYLTPEEKDYLEREHALKENGKERDRIKAILLRSEGWTVSQISQALRLHQSTIIRHVQEYQEGKLKNTSGGST
GQLSEEQTQELIAHLEANLYHHNHQIILYVQERYGVTYTIPGMHKWLHRNGFSYKKPKGIPHKADAQLQKEFVAKYQQLK
EELGGKEPILFMDSVHPTQATKLAYGWIRTGKVRHVGTTASRTRLNIIGAIQLGHIAEAITSQYDTINAESITAFMDKIR
TQYADKTVHLILDMAPYHRSSLVAEHASRLNIKLHFLPPYSPNLNPIERLWRVMNEQVRNNRCFKGAKDFKEAISGFFTD
TLPYIGSLLNERINDNFQFLKT
>Mature_342_residues
MLCAMKRLYLTPEEKDYLEREHALKENGKERDRIKAILLRSEGWTVSQISQALRLHQSTIIRHVQEYQEGKLKNTSGGST
GQLSEEQTQELIAHLEANLYHHNHQIILYVQERYGVTYTIPGMHKWLHRNGFSYKKPKGIPHKADAQLQKEFVAKYQQLK
EELGGKEPILFMDSVHPTQATKLAYGWIRTGKVRHVGTTASRTRLNIIGAIQLGHIAEAITSQYDTINAESITAFMDKIR
TQYADKTVHLILDMAPYHRSSLVAEHASRLNIKLHFLPPYSPNLNPIERLWRVMNEQVRNNRCFKGAKDFKEAISGFFTD
TLPYIGSLLNERINDNFQFLKT

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39478; Mature: 39478

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCAMKRLYLTPEEKDYLEREHALKENGKERDRIKAILLRSEGWTVSQISQALRLHQSTI
CCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH
IRHVQEYQEGKLKNTSGGSTGQLSEEQTQELIAHLEANLYHHNHQIILYVQERYGVTYTI
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEEEEEHHCCEEEEC
PGMHKWLHRNGFSYKKPKGIPHKADAQLQKEFVAKYQQLKEELGGKEPILFMDSVHPTQA
CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHH
TKLAYGWIRTGKVRHVGTTASRTRLNIIGAIQLGHIAEAITSQYDTINAESITAFMDKIR
HHHHHHHHCCCCEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TQYADKTVHLILDMAPYHRSSLVAEHASRLNIKLHFLPPYSPNLNPIERLWRVMNEQVRN
HHHHCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHC
NRCFKGAKDFKEAISGFFTDTLPYIGSLLNERINDNFQFLKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECC
>Mature Secondary Structure
MLCAMKRLYLTPEEKDYLEREHALKENGKERDRIKAILLRSEGWTVSQISQALRLHQSTI
CCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH
IRHVQEYQEGKLKNTSGGSTGQLSEEQTQELIAHLEANLYHHNHQIILYVQERYGVTYTI
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCEEEEEEEHHCCEEEEC
PGMHKWLHRNGFSYKKPKGIPHKADAQLQKEFVAKYQQLKEELGGKEPILFMDSVHPTQA
CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHH
TKLAYGWIRTGKVRHVGTTASRTRLNIIGAIQLGHIAEAITSQYDTINAESITAFMDKIR
HHHHHHHHCCCCEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TQYADKTVHLILDMAPYHRSSLVAEHASRLNIKLHFLPPYSPNLNPIERLWRVMNEQVRN
HHHHCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHC
NRCFKGAKDFKEAISGFFTDTLPYIGSLLNERINDNFQFLKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA