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The map label for this gene is 54294025

Identifier: 54294025

GI number: 54294025

Start: 1214553

End: 1214804

Strand: Reverse

Name: 54294025

Synonym: lpl1086

Alternate gene names: NA

Gene position: 1214804-1214553 (Counterclockwise)

Preceding gene: 54294026

Following gene: 54294024

Centisome position: 36.31

GC content: 34.92

Gene sequence:

>252_bases
GTGCCGAAACATGATGTTATCCTAAATTTGCCTGGTTTTACTATAAAAAAAGTAAGTGGTTATCAACCTTTGTTATTGGA
TTTAACCTATAAGCGTTTACCACGCTGTTCTCATTGTTCAAGTAAAAAGGTTCGAAAAAAATCGAGTTATGAACGAAAGG
TTCATCATGAATTAATAGGCCACAGACGGACTATTCTTCGATTCAAAGCATACAAACTGTTTTGCAATGAATGCGGTCGT
TATGGTAATTGA

Upstream 100 bases:

>100_bases
GTCCTCATTAAGTTAATAGGCTCTACCCCAACAAAGGGGGCACTTTAATCAAGTTAGTATAAACTAACCTCTTGATTTCG
CGATCAAAAAGGAGATTAAA

Downstream 100 bases:

>100_bases
CGTGGTCAAGAAAGGATGGTTTCGCTTACAGGAACGAGTTGAAGGACTCAGGATTGCTTCAGAGTTGATGAAGATGTGAT
CAAGAGACAGGTAATTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: TnpA Transposase; Transposase-Like Protein

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MPKHDVILNLPGFTIKKVSGYQPLLLDLTYKRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGR
YGN

Sequences:

>Translated_83_residues
MPKHDVILNLPGFTIKKVSGYQPLLLDLTYKRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGR
YGN
>Mature_82_residues
PKHDVILNLPGFTIKKVSGYQPLLLDLTYKRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGRY
GN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9804; Mature: 9673

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKHDVILNLPGFTIKKVSGYQPLLLDLTYKRLPRCSHCSSKKVRKKSSYERKVHHELIG
CCCCCEEEECCCCEEEECCCCCCHHEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HRRTILRFKAYKLFCNECGRYGN
HHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PKHDVILNLPGFTIKKVSGYQPLLLDLTYKRLPRCSHCSSKKVRKKSSYERKVHHELIG
CCCCEEEECCCCEEEECCCCCCHHEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HRRTILRFKAYKLFCNECGRYGN
HHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA