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The map label for this gene is 54294019

Identifier: 54294019

GI number: 54294019

Start: 1209864

End: 1210679

Strand: Reverse

Name: 54294019

Synonym: lpl1080

Alternate gene names: NA

Gene position: 1210679-1209864 (Counterclockwise)

Preceding gene: 54294024

Following gene: 54294016

Centisome position: 36.19

GC content: 28.8

Gene sequence:

>816_bases
ATGAATAGAAATAATAATCGTCGCCTATTTATATTAGGTGCTGGATTTTCAAAACCAGCAGGTTTACCACTTGGGACTGA
ACTTTTACAAGAAATTGTAAATTATGTTAATAGCCCCACCAACAATATTTTTTCTGAATATAAAGAACGGTTTATAGGAA
CTATTACAGAATACCAGGATTACTCTAATAAAAAAATTAATGAGATTAATATTGAAGAATTTATTGAGTATATTGATTAC
CAAAGTTTTTTAAATTTTTATGGCACTCTAAATTCTCCCTCAAGGCAAGGTAACGACATTCAGAAAATAATAAGGGTTTT
AATTGCGACCGTTCTTTTAAAAAAACGGGTGCAAGTTCTTAATACAAATTTATATAATAACTTTGCAGAAACTCTAACCA
ACAACGATATTGTAATAACTCTAAATTATGACACCCTAATCGAATATTTTTTACAGAAAAATGGAAAAAAGTTTCGTTTA
TTGCCTCCATGGATATATAAAGATAAATCAGATTTTGAACCCTACGACGGTATAACGTTACTGAAAGTTCATGGTTCGAT
TAACTGGTTTAATCTAAATGAATATTACGAGAAACAAAGAACTGATAATTTAAATAATCCACACTCATTATTACCTGCTG
ATTTTATTTTCAATAATCATGGGAATGATAAACCTAAATTAAATCCTATAGTCCCAATGAATATTGAACTAACAATTGAG
ACAAATTTAAAATATCTTTATTGGGTATCAGACCAAGAATTAAATAAATTCATCCAAGTATGTAAAGCTCCCATCTTTAG
TGGCAACCTAAATTAG

Upstream 100 bases:

>100_bases
CCTTGCTTTAGATTAGAGCAAATTTTTTATGTTATGAAAGCTTATTGCTTATTCAACCTTATTTTAAAGCAACAGTCATA
AATTACTCTATGATTAGAAT

Downstream 100 bases:

>100_bases
AGTTCATTGTCTTATTTTTTGCCAGATATTCCCACGGTGTTAAATCATTTAGCGAATCGTGCGGTCTCTCGTCGTTATAC
TCCTTTATCCAGTTTTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNRNNNRRLFILGAGFSKPAGLPLGTELLQEIVNYVNSPTNNIFSEYKERFIGTITEYQDYSNKKINEINIEEFIEYIDY
QSFLNFYGTLNSPSRQGNDIQKIIRVLIATVLLKKRVQVLNTNLYNNFAETLTNNDIVITLNYDTLIEYFLQKNGKKFRL
LPPWIYKDKSDFEPYDGITLLKVHGSINWFNLNEYYEKQRTDNLNNPHSLLPADFIFNNHGNDKPKLNPIVPMNIELTIE
TNLKYLYWVSDQELNKFIQVCKAPIFSGNLN

Sequences:

>Translated_271_residues
MNRNNNRRLFILGAGFSKPAGLPLGTELLQEIVNYVNSPTNNIFSEYKERFIGTITEYQDYSNKKINEINIEEFIEYIDY
QSFLNFYGTLNSPSRQGNDIQKIIRVLIATVLLKKRVQVLNTNLYNNFAETLTNNDIVITLNYDTLIEYFLQKNGKKFRL
LPPWIYKDKSDFEPYDGITLLKVHGSINWFNLNEYYEKQRTDNLNNPHSLLPADFIFNNHGNDKPKLNPIVPMNIELTIE
TNLKYLYWVSDQELNKFIQVCKAPIFSGNLN
>Mature_271_residues
MNRNNNRRLFILGAGFSKPAGLPLGTELLQEIVNYVNSPTNNIFSEYKERFIGTITEYQDYSNKKINEINIEEFIEYIDY
QSFLNFYGTLNSPSRQGNDIQKIIRVLIATVLLKKRVQVLNTNLYNNFAETLTNNDIVITLNYDTLIEYFLQKNGKKFRL
LPPWIYKDKSDFEPYDGITLLKVHGSINWFNLNEYYEKQRTDNLNNPHSLLPADFIFNNHGNDKPKLNPIVPMNIELTIE
TNLKYLYWVSDQELNKFIQVCKAPIFSGNLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31715; Mature: 31715

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNNNRRLFILGAGFSKPAGLPLGTELLQEIVNYVNSPTNNIFSEYKERFIGTITEYQD
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
YSNKKINEINIEEFIEYIDYQSFLNFYGTLNSPSRQGNDIQKIIRVLIATVLLKKRVQVL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NTNLYNNFAETLTNNDIVITLNYDTLIEYFLQKNGKKFRLLPPWIYKDKSDFEPYDGITL
HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCCCCEEE
LKVHGSINWFNLNEYYEKQRTDNLNNPHSLLPADFIFNNHGNDKPKLNPIVPMNIELTIE
EEEECCEEEEECHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCEECCEEEEEEE
TNLKYLYWVSDQELNKFIQVCKAPIFSGNLN
ECCEEEEEECHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNRNNNRRLFILGAGFSKPAGLPLGTELLQEIVNYVNSPTNNIFSEYKERFIGTITEYQD
CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
YSNKKINEINIEEFIEYIDYQSFLNFYGTLNSPSRQGNDIQKIIRVLIATVLLKKRVQVL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NTNLYNNFAETLTNNDIVITLNYDTLIEYFLQKNGKKFRLLPPWIYKDKSDFEPYDGITL
HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCCCCEEE
LKVHGSINWFNLNEYYEKQRTDNLNNPHSLLPADFIFNNHGNDKPKLNPIVPMNIELTIE
EEEECCEEEEECHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCEECCEEEEEEE
TNLKYLYWVSDQELNKFIQVCKAPIFSGNLN
ECCEEEEEECHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA