Click here to switch to the map view.

The map label for this gene is yjjK [C]

Identifier: 54293687

GI number: 54293687

Start: 840954

End: 842627

Strand: Direct

Name: yjjK [C]

Synonym: lpl0740

Alternate gene names: 54293687

Gene position: 840954-842627 (Clockwise)

Preceding gene: 54293686

Following gene: 54293688

Centisome position: 25.14

GC content: 40.92

Gene sequence:

>1674_bases
ATGGCGCAGTATATATTCACTATGAATAGAGTGAGCAAGATTGTTGAGAACCAAAGATTTATTTTAAAGGATATTTCATT
AAGTTTTTTTCCTGGAGCAAAAATTGGTGTATTAGGACTAAATGGTTCTGGAAAATCCACTCTATTGCGGATTATGGCAG
GTGTTGATACACAATATGAAGGCGAAGCAAGACCTCAACCAGGAATTAAAATCGGGTATCTTGCTCAAGAACCTGAGCTT
GACTTGAATAAAACTGTGCGTGAAATCGTCGAGGAAGGCGTCGCTGAAATTAAAGAAAAACTGTCTCGTTTCGATGCCAT
TAGTATGCGTTTTGCAGAACCAATGAGCGATGATGAGATGAATGCCTTGTTAACAGAGCAAGGTGAGTTACAAAATGAGA
TAGAAGCTTGTGGCGGTTGGGACCTGGAGAGAAAGCTTGATGTGGCTGCTGATGCATTAAGATTACCTGAGTGGGATGCC
ATAATAGAAAAACTGTCTGGTGGTGAACGCAGGCGTGTTGCTCTTTGCCGATTATTGCTATCAAGTCCTGATATGTTGCT
TCTTGATGAACCTACCAACCATTTGGATGCAGAAAGTGTTGCCTGGTTAGAGCATTACCTTGAAGAGTTTACTGGCACTG
TAGTTGCAATTACCCATGACAGGTATTTCCTGGATAATGCGGCGGAATGGATTTTGGAATTGGATCGAGGTGAAGGTATC
CCTTATAAGGGGAACTACAGTTCCTGGCTCGAACAAAAAGAAGCACGGTTGAGTATGGAGAAAAAGCAGGAGGATGCTTT
GCAACGTGCCATTAAAGCAGAATTGGAATGGGTTAGAACCTCACCCAAAGGTCGTCATGCTAAAAATAAAGCCCGCTTGG
CCCGATTTGAAGAAATGAATTCCAAGGAATTCCAAAAGCGTAATGAAACCAATGAAATATATATCCCGCCCGGTGAACGG
TTAGGTGATTTGGTTCTGGAGGGTGAAAAAATATGCAAATCTTACGGCGACAGGATATTAATAGATAATTTTGATTTCAA
ACTTCCCAAAGGCGGTATTTTAGGAATTATTGGTCCTAATGGAGCAGGTAAGTCTACTTTTTTAAAAATGTTAACCGGGC
AGGAAGAGCCAGACAAAGGTGTCATTCGTATTGGAGAAACAGTGAAGTTGGCTTATGTTGATCAGATGCGGGACAATCTA
AATCCCAATAATTCGGTGTGGCAGGAAATTTCAGATGGCCATGACATTATGCAGATAGGTAATTTCCAAATGCCTTCGCG
AGCCTATGTTGGGCGTTTTAATTTTAAAGGGACGGATCAACAAAAGAAGATTTCTCAATTGTCTGGTGGAGAGCGTAACC
GGGTTCATTTGGCAAAATTGTTGAAAAGTGGCGGGAATGTTTTGCTCCTCGATGAGCCCAGTAATGATTTGGATGTTGAG
ACATTGAGAGCATTGGAAGAGGCCATTCTTAATTTTCCAGGTTGTGCTATAGTGATTTCTCACGATAGATGGTTTTTAGA
TAGAATTTGTACCCATTTAATGGCTTTTGAAGGCGATTCACAAATAACCTTTTTCGAAGGTAATTACAGTGAATACGAAG
CGGATAGAAAGCGTCGATTGGGTGATGAGGCTAACAGACCGTCACGAATTAAATATCGAAAATTAAGTGATTAA

Upstream 100 bases:

>100_bases
GCACGCATTTCAAATTATGGCATCGGGTCAGTCAGGAAAAGTCATACTGAACTGGTAGTATTGTTTGATAAAAGGCTGAT
TATAGAGAGTTGGAGCGATT

Downstream 100 bases:

>100_bases
TTAGGGCCACCAGGTTTTACTATTGTGGAGATAAAATCTAAATGAAAAAAATTTATTGGGCAGTTATTTTAATGTGCCTC
GGATTAACTTCGTGTGTTGA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MAQYIFTMNRVSKIVENQRFILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDTQYEGEARPQPGIKIGYLAQEPEL
DLNKTVREIVEEGVAEIKEKLSRFDAISMRFAEPMSDDEMNALLTEQGELQNEIEACGGWDLERKLDVAADALRLPEWDA
IIEKLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLEHYLEEFTGTVVAITHDRYFLDNAAEWILELDRGEGI
PYKGNYSSWLEQKEARLSMEKKQEDALQRAIKAELEWVRTSPKGRHAKNKARLARFEEMNSKEFQKRNETNEIYIPPGER
LGDLVLEGEKICKSYGDRILIDNFDFKLPKGGILGIIGPNGAGKSTFLKMLTGQEEPDKGVIRIGETVKLAYVDQMRDNL
NPNNSVWQEISDGHDIMQIGNFQMPSRAYVGRFNFKGTDQQKKISQLSGGERNRVHLAKLLKSGGNVLLLDEPSNDLDVE
TLRALEEAILNFPGCAIVISHDRWFLDRICTHLMAFEGDSQITFFEGNYSEYEADRKRRLGDEANRPSRIKYRKLSD

Sequences:

>Translated_557_residues
MAQYIFTMNRVSKIVENQRFILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDTQYEGEARPQPGIKIGYLAQEPEL
DLNKTVREIVEEGVAEIKEKLSRFDAISMRFAEPMSDDEMNALLTEQGELQNEIEACGGWDLERKLDVAADALRLPEWDA
IIEKLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLEHYLEEFTGTVVAITHDRYFLDNAAEWILELDRGEGI
PYKGNYSSWLEQKEARLSMEKKQEDALQRAIKAELEWVRTSPKGRHAKNKARLARFEEMNSKEFQKRNETNEIYIPPGER
LGDLVLEGEKICKSYGDRILIDNFDFKLPKGGILGIIGPNGAGKSTFLKMLTGQEEPDKGVIRIGETVKLAYVDQMRDNL
NPNNSVWQEISDGHDIMQIGNFQMPSRAYVGRFNFKGTDQQKKISQLSGGERNRVHLAKLLKSGGNVLLLDEPSNDLDVE
TLRALEEAILNFPGCAIVISHDRWFLDRICTHLMAFEGDSQITFFEGNYSEYEADRKRRLGDEANRPSRIKYRKLSD
>Mature_556_residues
AQYIFTMNRVSKIVENQRFILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDTQYEGEARPQPGIKIGYLAQEPELD
LNKTVREIVEEGVAEIKEKLSRFDAISMRFAEPMSDDEMNALLTEQGELQNEIEACGGWDLERKLDVAADALRLPEWDAI
IEKLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLEHYLEEFTGTVVAITHDRYFLDNAAEWILELDRGEGIP
YKGNYSSWLEQKEARLSMEKKQEDALQRAIKAELEWVRTSPKGRHAKNKARLARFEEMNSKEFQKRNETNEIYIPPGERL
GDLVLEGEKICKSYGDRILIDNFDFKLPKGGILGIIGPNGAGKSTFLKMLTGQEEPDKGVIRIGETVKLAYVDQMRDNLN
PNNSVWQEISDGHDIMQIGNFQMPSRAYVGRFNFKGTDQQKKISQLSGGERNRVHLAKLLKSGGNVLLLDEPSNDLDVET
LRALEEAILNFPGCAIVISHDRWFLDRICTHLMAFEGDSQITFFEGNYSEYEADRKRRLGDEANRPSRIKYRKLSD

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=525, Percent_Identity=28, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI27881506, Length=551, Percent_Identity=29.2196007259528, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI10947137, Length=551, Percent_Identity=29.2196007259528, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI10947135, Length=552, Percent_Identity=28.2608695652174, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI69354671, Length=552, Percent_Identity=28.2608695652174, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI27881501, Length=173, Percent_Identity=27.1676300578035, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI30795238, Length=173, Percent_Identity=27.1676300578035, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI2367384, Length=556, Percent_Identity=66.3669064748201, Blast_Score=775, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=513, Percent_Identity=34.5029239766082, Blast_Score=299, Evalue=3e-82,
Organism=Escherichia coli, GI1789751, Length=526, Percent_Identity=30.6083650190114, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=30.7984790874525, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI87081782, Length=543, Percent_Identity=24.6777163904236, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI48994943, Length=481, Percent_Identity=22.037422037422, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=28.4974093264249, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI145693107, Length=598, Percent_Identity=23.5785953177258, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786975, Length=347, Percent_Identity=25.3602305475504, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788897, Length=207, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=165, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786345, Length=215, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=159, Percent_Identity=30.8176100628931, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790739, Length=215, Percent_Identity=27.906976744186, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788225, Length=204, Percent_Identity=24.5098039215686, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI48995001, Length=204, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787164, Length=181, Percent_Identity=28.1767955801105, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=27.7511961722488, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789891, Length=227, Percent_Identity=26.8722466960352, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787712, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=28.6363636363636, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87081834, Length=218, Percent_Identity=27.0642201834862, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786703, Length=229, Percent_Identity=31.4410480349345, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=26.8421052631579, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=568, Percent_Identity=27.6408450704225, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=29.2452830188679, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17555318, Length=517, Percent_Identity=27.4661508704062, Blast_Score=173, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17542146, Length=212, Percent_Identity=24.0566037735849, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71992285, Length=267, Percent_Identity=29.2134831460674, Blast_Score=69, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=29.2364990689013, Blast_Score=193, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6321121, Length=541, Percent_Identity=27.5415896487985, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6323278, Length=388, Percent_Identity=27.319587628866, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=378, Percent_Identity=27.2486772486773, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6324314, Length=377, Percent_Identity=25.4641909814324, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=30.952380952381, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24666836, Length=531, Percent_Identity=30.3201506591337, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24642252, Length=564, Percent_Identity=27.4822695035461, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI18859989, Length=564, Percent_Identity=27.4822695035461, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24666092, Length=185, Percent_Identity=28.6486486486486, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 63198; Mature: 63066

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYIFTMNRVSKIVENQRFILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDTQYE
CCCHHHHHHHHHHHHHCCCEEEEECCEEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPQPGIKIGYLAQEPELDLNKTVREIVEEGVAEIKEKLSRFDAISMRFAEPMSDDEM
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
NALLTEQGELQNEIEACGGWDLERKLDVAADALRLPEWDAIIEKLSGGERRRVALCRLLL
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH
SSPDMLLLDEPTNHLDAESVAWLEHYLEEFTGTVVAITHDRYFLDNAAEWILELDRGEGI
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCC
PYKGNYSSWLEQKEARLSMEKKQEDALQRAIKAELEWVRTSPKGRHAKNKARLARFEEMN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
SKEFQKRNETNEIYIPPGERLGDLVLEGEKICKSYGDRILIDNFDFKLPKGGILGIIGPN
HHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCC
GAGKSTFLKMLTGQEEPDKGVIRIGETVKLAYVDQMRDNLNPNNSVWQEISDGHDIMQIG
CCCHHHHHHHHCCCCCCCCCEEEECCEEEEHHHHHHHHCCCCCHHHHHHHCCCCCEEEEC
NFQMPSRAYVGRFNFKGTDQQKKISQLSGGERNRVHLAKLLKSGGNVLLLDEPSNDLDVE
CCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHH
TLRALEEAILNFPGCAIVISHDRWFLDRICTHLMAFEGDSQITFFEGNYSEYEADRKRRL
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHC
GDEANRPSRIKYRKLSD
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQYIFTMNRVSKIVENQRFILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGVDTQYE
CCHHHHHHHHHHHHHCCCEEEEECCEEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPQPGIKIGYLAQEPELDLNKTVREIVEEGVAEIKEKLSRFDAISMRFAEPMSDDEM
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
NALLTEQGELQNEIEACGGWDLERKLDVAADALRLPEWDAIIEKLSGGERRRVALCRLLL
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH
SSPDMLLLDEPTNHLDAESVAWLEHYLEEFTGTVVAITHDRYFLDNAAEWILELDRGEGI
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCC
PYKGNYSSWLEQKEARLSMEKKQEDALQRAIKAELEWVRTSPKGRHAKNKARLARFEEMN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
SKEFQKRNETNEIYIPPGERLGDLVLEGEKICKSYGDRILIDNFDFKLPKGGILGIIGPN
HHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCC
GAGKSTFLKMLTGQEEPDKGVIRIGETVKLAYVDQMRDNLNPNNSVWQEISDGHDIMQIG
CCCHHHHHHHHCCCCCCCCCEEEECCEEEEHHHHHHHHCCCCCHHHHHHHCCCCCEEEEC
NFQMPSRAYVGRFNFKGTDQQKKISQLSGGERNRVHLAKLLKSGGNVLLLDEPSNDLDVE
CCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHH
TLRALEEAILNFPGCAIVISHDRWFLDRICTHLMAFEGDSQITFFEGNYSEYEADRKRRL
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHC
GDEANRPSRIKYRKLSD
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]