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The map label for this gene is ybhR [H]

Identifier: 54293645

GI number: 54293645

Start: 784042

End: 785166

Strand: Direct

Name: ybhR [H]

Synonym: lpl0698

Alternate gene names: 54293645

Gene position: 784042-785166 (Clockwise)

Preceding gene: 54293644

Following gene: 54293646

Centisome position: 23.43

GC content: 36.89

Gene sequence:

>1125_bases
ATGGCAAAATTATCTCCAACAACAAGAATTTTTGCTCTTGTCATTAAAGAGATATTGACTTTATTCAAAGATCCCAAGGG
ACGAATTGTATTGATAGCTCCTCCACTCCTCCAGTTATTGATTTTTTCCTTTGCAGCTACTATGGAAATTAAAAATATTT
CTATAGGCATTTTGAACCAGGATTCCGGAAAGCATGGTTATGAAGTGATTCAACGCTTTATAGGCTCACCAACTTTTTCA
AAAGTTTTTTTTATTCAAAAGCAATCTGATATCAAACCTATCATTGATAACCAGGAAGCAATGGTTGTAATGACCATCCC
ACAAGATTTTTCTCGTAAAATCGAATCAAATTCACAAGCGAATATTCAGTTAATTTTGGATGGTCGACGTTCTAATGCAA
CCCAAATTGTAAATGGTTATATCAGTAGTATTATTGAAAACTATAATCAGGAAATTCAAAAAACGCATGGTGCAATCATG
ACGCCTCCCGTGATGGTCACTCGAAGTTGGTTTAATGAAAATTTGCTTTATCTCTGGTTTACCGTTCCTTCATTGGTATG
CATCTTATCCATGCTGATTTCTCTTGTGGTTACTGCTTTATCGGTAGCCAGAGAAAGAGAGTTGGGAACCTTTGATCAAT
TATTAGTATCACCTCTTACTCCCTATGAAATTCTTATTGGCAAGACTATTCCTGCCATTATCATTGGTTTGGCGGAAGGT
CTCTTGATGTGGGTTGCTGCGGTTTGGCTATTTGATGTTCCTTTTTATGGTTCTCCGTTACTGATGGTTTATATTTTGTT
TATTTTTATTATGTCAACGGTGGGTGTTGGCTTATTTATTTCTTCTATGTGTAAAACCCAGCAGCAAGCTATTTTGGGGG
TGTTTATCTACATGGTGCCTGTTGTGACGCTTTCCGGTTACGCTTCTCCGGTTGAAAACATGCCGGAATGGCTCCAGGAT
TTAACGTGGTTTAATCCATTAAAATTTACTTTAATAGCAGTAATTGGCATTTTTTTAAAAGGCATGTCGGCTTTAGAAGT
TTTTATCACAACATGGCCACTTCTATTGGTAGGGGCTGTTACATTATTTATTGCTGGCTGGTTTTTTAAGCAGCGTATGG
AGTAA

Upstream 100 bases:

>100_bases
ACATTTGGTCTCTTTTGATTCGTTGCCTTTTTGCGATTGCACTGATTGGATTTGCATTTTTTTTTATTACTGCGCATAAA
ACCAGAAAAAGGCTTGATTA

Downstream 100 bases:

>100_bases
GAAACAGTATGGACAGAAAATTAGCGCTACTCTTCAGTATTTCTTGTTTATTTGGCTGTACTGTCGGTCCTGATTATCAA
CGCCCAGACATTAAAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MAKLSPTTRIFALVIKEILTLFKDPKGRIVLIAPPLLQLLIFSFAATMEIKNISIGILNQDSGKHGYEVIQRFIGSPTFS
KVFFIQKQSDIKPIIDNQEAMVVMTIPQDFSRKIESNSQANIQLILDGRRSNATQIVNGYISSIIENYNQEIQKTHGAIM
TPPVMVTRSWFNENLLYLWFTVPSLVCILSMLISLVVTALSVARERELGTFDQLLVSPLTPYEILIGKTIPAIIIGLAEG
LLMWVAAVWLFDVPFYGSPLLMVYILFIFIMSTVGVGLFISSMCKTQQQAILGVFIYMVPVVTLSGYASPVENMPEWLQD
LTWFNPLKFTLIAVIGIFLKGMSALEVFITTWPLLLVGAVTLFIAGWFFKQRME

Sequences:

>Translated_374_residues
MAKLSPTTRIFALVIKEILTLFKDPKGRIVLIAPPLLQLLIFSFAATMEIKNISIGILNQDSGKHGYEVIQRFIGSPTFS
KVFFIQKQSDIKPIIDNQEAMVVMTIPQDFSRKIESNSQANIQLILDGRRSNATQIVNGYISSIIENYNQEIQKTHGAIM
TPPVMVTRSWFNENLLYLWFTVPSLVCILSMLISLVVTALSVARERELGTFDQLLVSPLTPYEILIGKTIPAIIIGLAEG
LLMWVAAVWLFDVPFYGSPLLMVYILFIFIMSTVGVGLFISSMCKTQQQAILGVFIYMVPVVTLSGYASPVENMPEWLQD
LTWFNPLKFTLIAVIGIFLKGMSALEVFITTWPLLLVGAVTLFIAGWFFKQRME
>Mature_373_residues
AKLSPTTRIFALVIKEILTLFKDPKGRIVLIAPPLLQLLIFSFAATMEIKNISIGILNQDSGKHGYEVIQRFIGSPTFSK
VFFIQKQSDIKPIIDNQEAMVVMTIPQDFSRKIESNSQANIQLILDGRRSNATQIVNGYISSIIENYNQEIQKTHGAIMT
PPVMVTRSWFNENLLYLWFTVPSLVCILSMLISLVVTALSVARERELGTFDQLLVSPLTPYEILIGKTIPAIIIGLAEGL
LMWVAAVWLFDVPFYGSPLLMVYILFIFIMSTVGVGLFISSMCKTQQQAILGVFIYMVPVVTLSGYASPVENMPEWLQDL
TWFNPLKFTLIAVIGIFLKGMSALEVFITTWPLLLVGAVTLFIAGWFFKQRME

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=365, Percent_Identity=43.5616438356164, Blast_Score=333, Evalue=2e-92,
Organism=Escherichia coli, GI1787011, Length=337, Percent_Identity=29.9703264094956, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI48994943, Length=356, Percent_Identity=25.8426966292135, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI226510979, Length=379, Percent_Identity=26.9129287598945, Blast_Score=103, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24650855, Length=386, Percent_Identity=19.6891191709845, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24650853, Length=386, Percent_Identity=19.6891191709845, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24582014, Length=406, Percent_Identity=20.935960591133, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24582012, Length=406, Percent_Identity=20.935960591133, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41990; Mature: 41858

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLSPTTRIFALVIKEILTLFKDPKGRIVLIAPPLLQLLIFSFAATMEIKNISIGILNQ
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHEECEEEEEEEEC
DSGKHGYEVIQRFIGSPTFSKVFFIQKQSDIKPIIDNQEAMVVMTIPQDFSRKIESNSQA
CCCCHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCC
NIQLILDGRRSNATQIVNGYISSIIENYNQEIQKTHGAIMTPPVMVTRSWFNENLLYLWF
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEHH
TVPSLVCILSMLISLVVTALSVARERELGTFDQLLVSPLTPYEILIGKTIPAIIIGLAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHH
LLMWVAAVWLFDVPFYGSPLLMVYILFIFIMSTVGVGLFISSMCKTQQQAILGVFIYMVP
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVTLSGYASPVENMPEWLQDLTWFNPLKFTLIAVIGIFLKGMSALEVFITTWPLLLVGAV
HHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
TLFIAGWFFKQRME
HHHHHHHHHHHHCC
>Mature Secondary Structure 
AKLSPTTRIFALVIKEILTLFKDPKGRIVLIAPPLLQLLIFSFAATMEIKNISIGILNQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHEECEEEEEEEEC
DSGKHGYEVIQRFIGSPTFSKVFFIQKQSDIKPIIDNQEAMVVMTIPQDFSRKIESNSQA
CCCCHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCC
NIQLILDGRRSNATQIVNGYISSIIENYNQEIQKTHGAIMTPPVMVTRSWFNENLLYLWF
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEHH
TVPSLVCILSMLISLVVTALSVARERELGTFDQLLVSPLTPYEILIGKTIPAIIIGLAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHH
LLMWVAAVWLFDVPFYGSPLLMVYILFIFIMSTVGVGLFISSMCKTQQQAILGVFIYMVP
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVTLSGYASPVENMPEWLQDLTWFNPLKFTLIAVIGIFLKGMSALEVFITTWPLLLVGAV
HHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
TLFIAGWFFKQRME
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]