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The map label for this gene is yybO [H]

Identifier: 54293635

GI number: 54293635

Start: 767627

End: 768919

Strand: Direct

Name: yybO [H]

Synonym: lpl0688

Alternate gene names: 54293635

Gene position: 767627-768919 (Clockwise)

Preceding gene: 54293634

Following gene: 54293636

Centisome position: 22.94

GC content: 40.29

Gene sequence:

>1293_bases
TTGCATACTGAAAACCGAACTAACTATGCAATGATAGGATGGCTACTTTGTGGGTTAGGAGCAATATTTTATAGTTATGA
GTATTTGTTACGCATTGCACCAAGCGTAATGGAAGATGCTTTAAGATCTCACTTTAATTTGTCAGCCTCTGGTTTTGGTT
TTCTTTCCTCCTTTTATTATTTTGCTTATGTCCCTATGCAATTGCCAGTTGGGGTTTTATTGGACAGGTATGGGCCGAAA
AGACTACTAACAATCGCTTGCTTGGTATGCGTTATTGGAACGTATATGTTTACGGGGACAACTATTTTTTGGGTAGCCGC
AACAGGTCGTTTTCTAGTTGGATTTGGCTCTGCTTTTGCCTTCGTAGGTGTTTTAAAGATCGCAACTCTTTGGCTGCCTG
AAAATCGATTGGCTATGATCTCTGGTATGACGTCGGCACTAGGCCCCATCGGTGCTATGCTGGGCGATAACTTTCTAGAA
TTATTCATCGTTAAGATGGGTTGGGTTAAGACACTTAACATGACCGCAGCTTTTGGTATTGTATTGACTTTAGTTTTGTG
GGTTGGGATCAGGGACAGAAAGGGACACCACAGGCAAAGCGGTACAGTTCCCACTCTTAAGAAGGGGTTAGTTGATCTGG
GAATTATTATTACCAGCCGACAGATATGGGTTAATGGAATGTATGGCTGTTTAGTTTATCTGCCAACTACGGTTTTTGCA
GAGTTGTGGGGTATTCCCTATTTACACCATGCCCATGGTTTAACTACCCAAGCGGCAGGATTAGCTAACTCCGTACTATT
TTTGGGATTTATTATTGGTGCTCCAATAATGGGGTATATTTCGGATCGTTTGTATCGACGTAAATTCCCAATGCTAATTG
GTGCTAGCGGCGCTGCAATTGTCATGATGATGATTTTATATTTGCCTGGATTAAATGAATCCAATATTCAAGCTTTAATG
TTTTTATTAGGATTGCTTTATAGCGCTCAAGCTATAGTTTTTGCTGTGGGCAGAGAGTTGAGTCCTGGTGAGGCAGCAGG
AACGGCAATGGCGGTAACTAATATGATAGTCATGCTCGGAGCAATGTTTTTGCAGCCGTTGGTAGGGCATTTATTAGACT
TCAGCTTATCAACTCATTTAAGTGATACTACTGGTATTGTTGTGGATAACATGAGTAAACTATATACCGTAGATGATTAT
CAGTTTGCCTTATCCATTATTCCATTAGGTATATTGATAGCAGCCATTTTAACTTTCTTTCTAAAAGAAACTCATGCAAA
AGCACCTAAATAA

Upstream 100 bases:

>100_bases
TGCAAGATGAGCTTTTATGCGCTTACAAGATATGCTGGGATGCAGAAATAGAACTAAGACAGGATTTAAAAAAACTTGAC
TAATTGTTAAGGAGGTAATT

Downstream 100 bases:

>100_bases
TATGACTACTAAAAAACAAATTTCATATGGCGTCCTGGTTTGCTTTATCGGGGCTGTTTTTTACTGTTATGAATTTATTC
TCAGAATTGTTCCGGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MHTENRTNYAMIGWLLCGLGAIFYSYEYLLRIAPSVMEDALRSHFNLSASGFGFLSSFYYFAYVPMQLPVGVLLDRYGPK
RLLTIACLVCVIGTYMFTGTTIFWVAATGRFLVGFGSAFAFVGVLKIATLWLPENRLAMISGMTSALGPIGAMLGDNFLE
LFIVKMGWVKTLNMTAAFGIVLTLVLWVGIRDRKGHHRQSGTVPTLKKGLVDLGIIITSRQIWVNGMYGCLVYLPTTVFA
ELWGIPYLHHAHGLTTQAAGLANSVLFLGFIIGAPIMGYISDRLYRRKFPMLIGASGAAIVMMMILYLPGLNESNIQALM
FLLGLLYSAQAIVFAVGRELSPGEAAGTAMAVTNMIVMLGAMFLQPLVGHLLDFSLSTHLSDTTGIVVDNMSKLYTVDDY
QFALSIIPLGILIAAILTFFLKETHAKAPK

Sequences:

>Translated_430_residues
MHTENRTNYAMIGWLLCGLGAIFYSYEYLLRIAPSVMEDALRSHFNLSASGFGFLSSFYYFAYVPMQLPVGVLLDRYGPK
RLLTIACLVCVIGTYMFTGTTIFWVAATGRFLVGFGSAFAFVGVLKIATLWLPENRLAMISGMTSALGPIGAMLGDNFLE
LFIVKMGWVKTLNMTAAFGIVLTLVLWVGIRDRKGHHRQSGTVPTLKKGLVDLGIIITSRQIWVNGMYGCLVYLPTTVFA
ELWGIPYLHHAHGLTTQAAGLANSVLFLGFIIGAPIMGYISDRLYRRKFPMLIGASGAAIVMMMILYLPGLNESNIQALM
FLLGLLYSAQAIVFAVGRELSPGEAAGTAMAVTNMIVMLGAMFLQPLVGHLLDFSLSTHLSDTTGIVVDNMSKLYTVDDY
QFALSIIPLGILIAAILTFFLKETHAKAPK
>Mature_430_residues
MHTENRTNYAMIGWLLCGLGAIFYSYEYLLRIAPSVMEDALRSHFNLSASGFGFLSSFYYFAYVPMQLPVGVLLDRYGPK
RLLTIACLVCVIGTYMFTGTTIFWVAATGRFLVGFGSAFAFVGVLKIATLWLPENRLAMISGMTSALGPIGAMLGDNFLE
LFIVKMGWVKTLNMTAAFGIVLTLVLWVGIRDRKGHHRQSGTVPTLKKGLVDLGIIITSRQIWVNGMYGCLVYLPTTVFA
ELWGIPYLHHAHGLTTQAAGLANSVLFLGFIIGAPIMGYISDRLYRRKFPMLIGASGAAIVMMMILYLPGLNESNIQALM
FLLGLLYSAQAIVFAVGRELSPGEAAGTAMAVTNMIVMLGAMFLQPLVGHLLDFSLSTHLSDTTGIVVDNMSKLYTVDDY
QFALSIIPLGILIAAILTFFLKETHAKAPK

Specific function: Uptake Of D-Glucarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI1789152, Length=389, Percent_Identity=25.4498714652956, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789515, Length=387, Percent_Identity=21.9638242894057, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46997; Mature: 46997

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCC
>Mature Secondary Structure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HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]