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The map label for this gene is arnT [H]

Identifier: 54293619

GI number: 54293619

Start: 727334

End: 728815

Strand: Direct

Name: arnT [H]

Synonym: lpl0672

Alternate gene names: 54293619

Gene position: 727334-728815 (Clockwise)

Preceding gene: 54293609

Following gene: 54293620

Centisome position: 21.74

GC content: 40.55

Gene sequence:

>1482_bases
TTGAGTTTTCAAACAGATAAAGAGATTCAACAAAAATTCTTTAGTTATACTTTGTTTGTGTTGGTTGTTCTGCTGATATG
CCGCTTGATTGCCAATTATTTTTTTCCTTTGTTTGATACGACCGAATCCCGCTACGCTGAAATTGCACGCAAAATGCTGG
AAACAGGGAACTGGGTGACTTTGCAGCAGGATTATGGTGTTCCATTTTGGGCTAAACCACCTTTATCAATCTGGTTGTCT
GCTTTTTTTATGCAACTATTGGGTGTTAATGAATTCGCAGTCCGCTTGCCAGGTCTTTTGCTCTCTGTTGGTGTTTTATG
GTTGGTTTGGGGAGTGGCAAAAAAACAGAGTGGCTCAATGGCTGCGCTCTTTTCCCTATTAACACTGGCAGGGTCGCTTT
ATTTTTTCCTTGATGCAGGGACCGTGATGACTGACCCGGCATTACTTTTTTGTACCACGCTTGCAAGTGTCTCGTTTTGG
CATGCCATGGTTTATGAAAACAAGATATGGTCTTATGCATTTTTCGCAGGATTGGGCCTGGGTTTATTAGCAAAAGGCCC
AATTGCTGTGGTACTGGTCGGAATGGTTGTATTTTTCTGGGTTCTGCTACGCAATGAATGGCTTAATCTATGGAAGAGAT
TACCGTGGTTTAAGGGCACATTTCTTCTTTTGTTAATTGCTATGCCCTGGTATGTTCTGGCTGAATTACGAACCCCAGGA
TTTTTAAATTATTTTATTCTGGGAGAGCATTTCCATCGATTTTTAACCCCTGGCTGGTCTGGTGATAAATACGGGATAGT
GCACCATGTGCCTAAAGGAACAATATGGTTATATGCTATAGCAGGCATCTTTCCTTGGAATATTATAGCAGGCGGCTGGC
TGGTGAAACATGGAAAAATGTTGCCCTCTCTGTGCCAAAGTGAAGATGGATGGTTAATTTATTTAACTCTTTGGATGATT
ACTCCGCTTCTTTTTTTCACTTTTGCCAGCAATATCATATACCCCTATGTGTTTCCTTCTCTACCCGCATTTGCTTTGCT
TTTTGCTGAAATTTTGAATCGCTTGAATTTGGAATTGAAACATTTGAAGTGGGTCCTTATCTCCTCATTACTCTGTGGAG
TTTTATTTTTGGCAGTGGCTTTTGTACTTGGTGTAAAACCAGACGTTGTGCCTAATACGCATAAGCCGATTATTACTGCA
TGGCTGAATCAGAACCCAACAGCAGGAAGTCACCTTGTTTATTGGGGATACAAGACGGATTTCTCTGCTGAGTTTTACTC
GGGTGGTCAAGTGAAATCGGTTAAAAATCCAAGTGAATTATGTAAATTATTCTCTAACCATTTGGAAAACTATTTGGTTA
TCAATAGCAAAGAAATTCAGCAGATTCCCGGAGAGTTACTTGCAAAATTGACACCCATCAACAAATTCAGAGTCCATCGG
GATACCTTGATATTGTTTTATTCACCTGTGCTGAGTTGTTGA

Upstream 100 bases:

>100_bases
TTTATTCCCGGGAACACTTTGGCCGTGGTAACCACAGGCACACTCCAATACTCCATTTGATGGTACCCGGATTTAGTGGT
TTAAATAACAGAGGTATATT

Downstream 100 bases:

>100_bases
GCAGTGGTTTCTAATTCCATCTCATAGTAAAGTAAAGCAAACGAAGCTCAAAATAATAAATACATGGCAAAATTATATTT
CTACTATGCCGCTATGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MSFQTDKEIQQKFFSYTLFVLVVLLICRLIANYFFPLFDTTESRYAEIARKMLETGNWVTLQQDYGVPFWAKPPLSIWLS
AFFMQLLGVNEFAVRLPGLLLSVGVLWLVWGVAKKQSGSMAALFSLLTLAGSLYFFLDAGTVMTDPALLFCTTLASVSFW
HAMVYENKIWSYAFFAGLGLGLLAKGPIAVVLVGMVVFFWVLLRNEWLNLWKRLPWFKGTFLLLLIAMPWYVLAELRTPG
FLNYFILGEHFHRFLTPGWSGDKYGIVHHVPKGTIWLYAIAGIFPWNIIAGGWLVKHGKMLPSLCQSEDGWLIYLTLWMI
TPLLFFTFASNIIYPYVFPSLPAFALLFAEILNRLNLELKHLKWVLISSLLCGVLFLAVAFVLGVKPDVVPNTHKPIITA
WLNQNPTAGSHLVYWGYKTDFSAEFYSGGQVKSVKNPSELCKLFSNHLENYLVINSKEIQQIPGELLAKLTPINKFRVHR
DTLILFYSPVLSC

Sequences:

>Translated_493_residues
MSFQTDKEIQQKFFSYTLFVLVVLLICRLIANYFFPLFDTTESRYAEIARKMLETGNWVTLQQDYGVPFWAKPPLSIWLS
AFFMQLLGVNEFAVRLPGLLLSVGVLWLVWGVAKKQSGSMAALFSLLTLAGSLYFFLDAGTVMTDPALLFCTTLASVSFW
HAMVYENKIWSYAFFAGLGLGLLAKGPIAVVLVGMVVFFWVLLRNEWLNLWKRLPWFKGTFLLLLIAMPWYVLAELRTPG
FLNYFILGEHFHRFLTPGWSGDKYGIVHHVPKGTIWLYAIAGIFPWNIIAGGWLVKHGKMLPSLCQSEDGWLIYLTLWMI
TPLLFFTFASNIIYPYVFPSLPAFALLFAEILNRLNLELKHLKWVLISSLLCGVLFLAVAFVLGVKPDVVPNTHKPIITA
WLNQNPTAGSHLVYWGYKTDFSAEFYSGGQVKSVKNPSELCKLFSNHLENYLVINSKEIQQIPGELLAKLTPINKFRVHR
DTLILFYSPVLSC
>Mature_492_residues
SFQTDKEIQQKFFSYTLFVLVVLLICRLIANYFFPLFDTTESRYAEIARKMLETGNWVTLQQDYGVPFWAKPPLSIWLSA
FFMQLLGVNEFAVRLPGLLLSVGVLWLVWGVAKKQSGSMAALFSLLTLAGSLYFFLDAGTVMTDPALLFCTTLASVSFWH
AMVYENKIWSYAFFAGLGLGLLAKGPIAVVLVGMVVFFWVLLRNEWLNLWKRLPWFKGTFLLLLIAMPWYVLAELRTPGF
LNYFILGEHFHRFLTPGWSGDKYGIVHHVPKGTIWLYAIAGIFPWNIIAGGWLVKHGKMLPSLCQSEDGWLIYLTLWMIT
PLLFFTFASNIIYPYVFPSLPAFALLFAEILNRLNLELKHLKWVLISSLLCGVLFLAVAFVLGVKPDVVPNTHKPIITAW
LNQNPTAGSHLVYWGYKTDFSAEFYSGGQVKSVKNPSELCKLFSNHLENYLVINSKEIQQIPGELLAKLTPINKFRVHRD
TLILFYSPVLSC

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=355, Percent_Identity=27.887323943662, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 56136; Mature: 56005

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHEEEEECHHHCC
>Mature Secondary Structure 
SFQTDKEIQQKFFSYTLFVLVVLLICRLIANYFFPLFDTTESRYAEIARKMLETGNWVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCEEE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HHEEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA