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The map label for this gene is 54293549

Identifier: 54293549

GI number: 54293549

Start: 649390

End: 650577

Strand: Direct

Name: 54293549

Synonym: lpl0601

Alternate gene names: NA

Gene position: 649390-650577 (Clockwise)

Preceding gene: 54293540

Following gene: 54293551

Centisome position: 19.41

GC content: 41.75

Gene sequence:

>1188_bases
ATGGTATTCGGCTTTTTAAATCTGTCTTTCTGGGGATATGTTCTTGCAACTTTTATCCTGACTCAAATCACAATTGCATC
TGTTACTATCTATCTTCATCGGAACCAGACTCATAGAGCGTTAACATTACACCCTGTGGTCAGTCATTTTTTCCGTTTTT
GGTTATGGCTAACTACGGGTATGGTTACTGCAGATTGGGTTGCTATCCATCGCAAGCACCATGCAACAACTGATGTTGAG
GGAGACCCTCATAGCCCAGTGGTTGAGGGAATCAGGAAGGTATTTTGGCAAGGCGCTGAACTTTACAGAGAGGCACGCAA
GGACAGGGATATGGTTGCCAAATATTCTCATGGCACACCAACCGATTGGATAGAGCGTAATGTCTACTCGCGCCATTCAA
GTAAAGGTATTTTGCTGATGTTATTACTGGATTTATTTTTCTTCGGGATTCCTGGAATGACAGTATGGGCAATCCAAATG
ATGTGGATTCCGCTGTTTGCTGCGGGAGTCATCAATGGCATTGGCCATTATTGGGGATACAGGAATTTTGAATGCCCTGA
TGCTGCTACTAATATCATTCCCTGGGGATTTTGGATTGGTGGAGAAGAATTACATAATAATCATCACACTTTTGCTTCCT
CAGCCAAATTTTCAGTGAAATGGTGGGAGTTTGATATTGGTTGGATGTATATTCGCATTCTTTCCTTTTTCGGTTTGGCC
AAGGTAAAAAAATTACCTCCCAAACTGGCTATGGATGAAGGAAAATTCCATGTTGATCTGGATACTGTGAGAGCAGTTAT
TTCAAATCGCTTTCAAGTGATGTCTGATTACTATAAGAATGTCATCAGACCTATTTTGAAGTATGAAAAAAATACCGGCA
TTGAGACAAAAGAAGACAAGAAATTGTTTCAACGTGCAGGTAGATTACTGCGTAGAGAGGATAAGCTATTATCGACAAAA
GCTAAAACTCGTTTGCAAAAACTGCTCGATGCCCGCGAACAGTTGAGGGTGGTTTACTCTTACAAGCAATCATTACAAAA
TGTTTGGCTGAAAACAGCAACGACTCAAAAAGAACTAGTAGAAGCTCTGCAGCAATGGTGCCGCCAGGCAGAGGAATCGG
GTCTTGATGTGCTGAAACAGTTTGCTCAACAATTGAAAGGCTACGTACCGGTATATACCAGGGAGTGA

Upstream 100 bases:

>100_bases
TGTTATCATTACACATATATTGATACTATAATTTAGGAATAAAATACATTCACTCTTAAATTATAGTTATTTTTATAATT
CCGTACAATGTGGGGTTATC

Downstream 100 bases:

>100_bases
TGTTTTTGCACTCCCCATCAAGGCACAATGCAGCTAATATTTTAGTGGTGGCATATAAAATCATTGGGGAAAACAACAGC
AACGCTATTGTTAGAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Fatty-Acid Desaturase; Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Transmembrane Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVVSHFFRFWLWLTTGMVTADWVAIHRKHHATTDVE
GDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTPTDWIERNVYSRHSSKGILLMLLLDLFFFGIPGMTVWAIQM
MWIPLFAAGVINGIGHYWGYRNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSDYYKNVIRPILKYEKNTGIETKEDKKLFQRAGRLLRREDKLLSTK
AKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELVEALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE

Sequences:

>Translated_395_residues
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVVSHFFRFWLWLTTGMVTADWVAIHRKHHATTDVE
GDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTPTDWIERNVYSRHSSKGILLMLLLDLFFFGIPGMTVWAIQM
MWIPLFAAGVINGIGHYWGYRNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSDYYKNVIRPILKYEKNTGIETKEDKKLFQRAGRLLRREDKLLSTK
AKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELVEALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE
>Mature_395_residues
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVVSHFFRFWLWLTTGMVTADWVAIHRKHHATTDVE
GDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTPTDWIERNVYSRHSSKGILLMLLLDLFFFGIPGMTVWAIQM
MWIPLFAAGVINGIGHYWGYRNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSDYYKNVIRPILKYEKNTGIETKEDKKLFQRAGRLLRREDKLLSTK
AKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELVEALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46183; Mature: 46183

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVVSHFFRFWLWLTTG
CEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHH
MVTADWVAIHRKHHATTDVEGDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
TDWIERNVYSRHSSKGILLMLLLDLFFFGIPGMTVWAIQMMWIPLFAAGVINGIGHYWGY
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
CCCCCCCHHCCCCCCCEEECHHHHCCCCCHHHCCCCEEEEEEEECHHHHHHHHHHHHHHH
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSDYYKNVIRPILKYEKNTGIETKEDK
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KLFQRAGRLLRREDKLLSTKAKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVVSHFFRFWLWLTTG
CEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHH
MVTADWVAIHRKHHATTDVEGDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
TDWIERNVYSRHSSKGILLMLLLDLFFFGIPGMTVWAIQMMWIPLFAAGVINGIGHYWGY
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
CCCCCCCHHCCCCCCCEEECHHHHCCCCCHHHCCCCEEEEEEEECHHHHHHHHHHHHHHH
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSDYYKNVIRPILKYEKNTGIETKEDK
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KLFQRAGRLLRREDKLLSTKAKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA