Definition | Legionella pneumophila str. Lens, complete genome. |
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Accession | NC_006369 |
Length | 3,345,687 |
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The map label for this gene is yaeT [H]
Identifier: 54293496
GI number: 54293496
Start: 593593
End: 595905
Strand: Direct
Name: yaeT [H]
Synonym: lpl0545
Alternate gene names: 54293496
Gene position: 593593-595905 (Clockwise)
Preceding gene: 54293495
Following gene: 54293497
Centisome position: 17.74
GC content: 39.43
Gene sequence:
>2313_bases ATGAAAAAAGTCAGTAATAAATTAATATTAGGTGTTTGTTGTTCTACTCTTTTAGCTTGGTCATCCCAATCCTTTTCTTC TGATACCTTTATTGTCAAAGGGATTAGAGTTAACGGATTACAAAGGGTTTCGACAGGTACGGTATTAAACTATATGCCTG TGCAAGTGGGTGAGGAAATCAGTTCCAGCTCAACAGCTCAAATTATCCGCGCTCTCTATGAGACAGGATTTTTCCAGTCC GTTTCGCTTGAACGCCAAGGGAATGTGTTAGTGGTCAATGTGGTAGAGCGAGCAACTATTGGCTCTATTACCGTTGTAGG AAATAAGGAAATACCCTCTGATAAAATGAAGGCTTTTCTTAAAGAAATGGGGCTGGTCAAAGGCAGAGTATTTCAAAGAT CTTCCTTGGAGCGTTTGGAGAAGGAGCTGAAACAGGCCTACACAGCCAGAGGGAAGTATAATTCTCGTATTGAAACTAAA GTAACTCCCCTTACTGAAAATAGAGTAGCCATTAGTATTACTGTATCAGAAGGTCGAGTTTCACGGATTAAAGAAATAAA AATAATTGGTAACCATGATTTTAAAGCAAATGAGTTATTGCCTGAATTGACGTTAAGTACAAGCAACCTGTTTACTTATT TTACTAAAAAAGATCAATATTCCAAAGCAGGAATGGATGCTTCTTTAGAAGCATTACGTTCATTTTATTTAGATAGGGGA TATTTGAAATTTAATGTTGTCTCTTCGCAAGTTTTGCTATCGCCTGATAAAAAAGACGTCTACATCAATATTCATATAGA AGAAGGACCTCAATATCATTTCTCAGGTTATGATGTGGTTGGAAAAACGATATTACCTAAAGAAAAAATTGATTCACTGA TCCAGGTTAAGAAAGGCGATATTTTTTCTCGTAAGAAGGTTACTGAATCCATCTCTGCAATAGGGTTAGCTTTAGGGGAT GTAGGATATGGTTTTCCCGCGATTAATGCTGAACCTAGACTAGATGAAAATAATAAAACAGTATTTATTACTTTTGTAGT GCAGCCGGGTCGTCATGTTTATGTGAGACGTATTAATTTTCATGGTAATACGAAGACAGGAGATTATGTTCTGCGTAATG TGATTCGTCAGGATGAAGGTGGGTTACTGTCTTTACATAACATCAAGGAATCTGAGCGTCAGTTACGAATGTTGGGCTAT CTAAAAAATATTGATGTCAAAACGACGCCTGTTCCAGGAACCAATAATCAGGTCGATTTGGATGTTAATGTGGAAGAAGC TCCTTCAGCAGAAGCAAGCGCATCCATGGGATATGGTACAAACGGTTATCAATTTAATGCATCCGTTAACCAACGCAATT TTATGGGAAGTGGACGTTCCATGGGGGCTGCTTTCAATGCAAGTCAATGGGGGCAAGACTACTCTTTTAACTATTATAAT CCGTTCTATACCGATACTGGGGTAGGCCGGGGAGGAAGCTTATATTATTCAAGGATTGATCCTAAAAATTTAAATGTCAG TACATACAGTTCTAATCGCTATGGTGGCGACATCAGCTATAACTTCCCGTTAGGTGAGAAAAGCAGTTTTCAATTGGGAT ATGGTTATCAAGATATCAATATTAAGTCAGTGGGTTACGTACTCCCCATCATCAACTTTGTTGCTTTAAACGGTAATCAT TTTCAGGAAATAAGGTTGACATCCGGTTGGAGTAGAAACAGCTATGATCAAATGCCTTATCCTAACCAGGGATTTAATCA ACAAGCTATTGCTATGGTCGCGTTACCAGCAACATCGCAATCTCTATCTTACTATAAGAGCTCTTATCAGGCGCATTTAT ATTATCCTCTAACCCGTGGCTGGATTTTTTCTGTTCTGGGTAATGTGGGGTATGGAAATACTTTTGATAATTTCGGATTA CCCTTTTTTGAAAACTACTATGCCGGTGGTCCAGTTCAACCAGGCCAGGTTCGAGGATACGATAGTTATTCTTTAGGCCC GCAAGATAATTTTGGGAATGCAATGGGTGCGAATTTCCTGGTGAATGGAAGTGTAGGCCTGATACTACCATACCCATTGA GTCGAGATAATGTAAGAACGACTATTTTTGCTGATGCGGGTAATGTATTTGCTTCCGGGACACCTCCTGCTTTACGTGGA ACTCCGGCAGGTCCGATGCGTTATTCAGCTGGTGTGTCATTAGAATGGCGCTCACCTTTTGGTCCATTGTCTTTTAGCTT GGCTAAGGCATTGAATCCACAGCCATTGGATCAGACTCAACTCTTCCAATTTGCTCTTTCCTCAGGTTTTTAG
Upstream 100 bases:
>100_bases TGACAGTAGTTTCTAGTTCCTATAAAAGGGTTTCAATTTTTTGTACAATTGAATGGTTTTTAACTTCATAAGTGCGCGTA GTGCTGGACGTAAAATAATA
Downstream 100 bases:
>100_bases AGGTATTATGGATTTAGAGTAAGCGGATTTTAGTATTTTAAAAACTAGTGCTGTACATATCGCAACCTTTTTCGAATTGT GCTAGCATTTCAAACTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MKKVSNKLILGVCCSTLLAWSSQSFSSDTFIVKGIRVNGLQRVSTGTVLNYMPVQVGEEISSSSTAQIIRALYETGFFQS VSLERQGNVLVVNVVERATIGSITVVGNKEIPSDKMKAFLKEMGLVKGRVFQRSSLERLEKELKQAYTARGKYNSRIETK VTPLTENRVAISITVSEGRVSRIKEIKIIGNHDFKANELLPELTLSTSNLFTYFTKKDQYSKAGMDASLEALRSFYLDRG YLKFNVVSSQVLLSPDKKDVYINIHIEEGPQYHFSGYDVVGKTILPKEKIDSLIQVKKGDIFSRKKVTESISAIGLALGD VGYGFPAINAEPRLDENNKTVFITFVVQPGRHVYVRRINFHGNTKTGDYVLRNVIRQDEGGLLSLHNIKESERQLRMLGY LKNIDVKTTPVPGTNNQVDLDVNVEEAPSAEASASMGYGTNGYQFNASVNQRNFMGSGRSMGAAFNASQWGQDYSFNYYN PFYTDTGVGRGGSLYYSRIDPKNLNVSTYSSNRYGGDISYNFPLGEKSSFQLGYGYQDINIKSVGYVLPIINFVALNGNH FQEIRLTSGWSRNSYDQMPYPNQGFNQQAIAMVALPATSQSLSYYKSSYQAHLYYPLTRGWIFSVLGNVGYGNTFDNFGL PFFENYYAGGPVQPGQVRGYDSYSLGPQDNFGNAMGANFLVNGSVGLILPYPLSRDNVRTTIFADAGNVFASGTPPALRG TPAGPMRYSAGVSLEWRSPFGPLSFSLAKALNPQPLDQTQLFQFALSSGF
Sequences:
>Translated_770_residues MKKVSNKLILGVCCSTLLAWSSQSFSSDTFIVKGIRVNGLQRVSTGTVLNYMPVQVGEEISSSSTAQIIRALYETGFFQS VSLERQGNVLVVNVVERATIGSITVVGNKEIPSDKMKAFLKEMGLVKGRVFQRSSLERLEKELKQAYTARGKYNSRIETK VTPLTENRVAISITVSEGRVSRIKEIKIIGNHDFKANELLPELTLSTSNLFTYFTKKDQYSKAGMDASLEALRSFYLDRG YLKFNVVSSQVLLSPDKKDVYINIHIEEGPQYHFSGYDVVGKTILPKEKIDSLIQVKKGDIFSRKKVTESISAIGLALGD VGYGFPAINAEPRLDENNKTVFITFVVQPGRHVYVRRINFHGNTKTGDYVLRNVIRQDEGGLLSLHNIKESERQLRMLGY LKNIDVKTTPVPGTNNQVDLDVNVEEAPSAEASASMGYGTNGYQFNASVNQRNFMGSGRSMGAAFNASQWGQDYSFNYYN PFYTDTGVGRGGSLYYSRIDPKNLNVSTYSSNRYGGDISYNFPLGEKSSFQLGYGYQDINIKSVGYVLPIINFVALNGNH FQEIRLTSGWSRNSYDQMPYPNQGFNQQAIAMVALPATSQSLSYYKSSYQAHLYYPLTRGWIFSVLGNVGYGNTFDNFGL PFFENYYAGGPVQPGQVRGYDSYSLGPQDNFGNAMGANFLVNGSVGLILPYPLSRDNVRTTIFADAGNVFASGTPPALRG TPAGPMRYSAGVSLEWRSPFGPLSFSLAKALNPQPLDQTQLFQFALSSGF >Mature_770_residues MKKVSNKLILGVCCSTLLAWSSQSFSSDTFIVKGIRVNGLQRVSTGTVLNYMPVQVGEEISSSSTAQIIRALYETGFFQS VSLERQGNVLVVNVVERATIGSITVVGNKEIPSDKMKAFLKEMGLVKGRVFQRSSLERLEKELKQAYTARGKYNSRIETK VTPLTENRVAISITVSEGRVSRIKEIKIIGNHDFKANELLPELTLSTSNLFTYFTKKDQYSKAGMDASLEALRSFYLDRG YLKFNVVSSQVLLSPDKKDVYINIHIEEGPQYHFSGYDVVGKTILPKEKIDSLIQVKKGDIFSRKKVTESISAIGLALGD VGYGFPAINAEPRLDENNKTVFITFVVQPGRHVYVRRINFHGNTKTGDYVLRNVIRQDEGGLLSLHNIKESERQLRMLGY LKNIDVKTTPVPGTNNQVDLDVNVEEAPSAEASASMGYGTNGYQFNASVNQRNFMGSGRSMGAAFNASQWGQDYSFNYYN PFYTDTGVGRGGSLYYSRIDPKNLNVSTYSSNRYGGDISYNFPLGEKSSFQLGYGYQDINIKSVGYVLPIINFVALNGNH FQEIRLTSGWSRNSYDQMPYPNQGFNQQAIAMVALPATSQSLSYYKSSYQAHLYYPLTRGWIFSVLGNVGYGNTFDNFGL PFFENYYAGGPVQPGQVRGYDSYSLGPQDNFGNAMGANFLVNGSVGLILPYPLSRDNVRTTIFADAGNVFASGTPPALRG TPAGPMRYSAGVSLEWRSPFGPLSFSLAKALNPQPLDQTQLFQFALSSGF
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=806, Percent_Identity=32.0099255583127, Blast_Score=429, Evalue=1e-121,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 85240; Mature: 85240
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVSNKLILGVCCSTLLAWSSQSFSSDTFIVKGIRVNGLQRVSTGTVLNYMPVQVGEEI CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCEEEECCCCEEEEECHHHCCHH SSSSTAQIIRALYETGFFQSVSLERQGNVLVVNVVERATIGSITVVGNKEIPSDKMKAFL CCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHH KEMGLVKGRVFQRSSLERLEKELKQAYTARGKYNSRIETKVTPLTENRVAISITVSEGRV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCC SRIKEIKIIGNHDFKANELLPELTLSTSNLFTYFTKKDQYSKAGMDASLEALRSFYLDRG CEEEEEEEEECCCCCHHHCCCHHEECCCCEEEEEECCCCHHHCCCCHHHHHHHHHHHCCC YLKFNVVSSQVLLSPDKKDVYINIHIEEGPQYHFSGYDVVGKTILPKEKIDSLIQVKKGD EEEEEEECCEEEECCCCCEEEEEEEEECCCCEEECCEEEECCCCCCHHHHHHHHEECCCC IFSRKKVTESISAIGLALGDVGYGFPAINAEPRLDENNKTVFITFVVQPGRHVYVRRINF CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEE HGNTKTGDYVLRNVIRQDEGGLLSLHNIKESERQLRMLGYLKNIDVKTTPVPGTNNQVDL CCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEE DVNVEEAPSAEASASMGYGTNGYQFNASVNQRNFMGSGRSMGAAFNASQWGQDYSFNYYN EECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC PFYTDTGVGRGGSLYYSRIDPKNLNVSTYSSNRYGGDISYNFPLGEKSSFQLGYGYQDIN CEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEECCEEECC IKSVGYVLPIINFVALNGNHFQEIRLTSGWSRNSYDQMPYPNQGFNQQAIAMVALPATSQ EEHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCH SLSYYKSSYQAHLYYPLTRGWIFSVLGNVGYGNTFDNFGLPFFENYYAGGPVQPGQVRGY HHHHHHCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEECC DSYSLGPQDNFGNAMGANFLVNGSVGLILPYPLSRDNVRTTIFADAGNVFASGTPPALRG CCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEEECCCEEECCCCCCCCC TPAGPMRYSAGVSLEWRSPFGPLSFSLAKALNPQPLDQTQLFQFALSSGF CCCCCCEECCCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKKVSNKLILGVCCSTLLAWSSQSFSSDTFIVKGIRVNGLQRVSTGTVLNYMPVQVGEEI CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCEEEECCCCEEEEECHHHCCHH SSSSTAQIIRALYETGFFQSVSLERQGNVLVVNVVERATIGSITVVGNKEIPSDKMKAFL CCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHH KEMGLVKGRVFQRSSLERLEKELKQAYTARGKYNSRIETKVTPLTENRVAISITVSEGRV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCC SRIKEIKIIGNHDFKANELLPELTLSTSNLFTYFTKKDQYSKAGMDASLEALRSFYLDRG CEEEEEEEEECCCCCHHHCCCHHEECCCCEEEEEECCCCHHHCCCCHHHHHHHHHHHCCC YLKFNVVSSQVLLSPDKKDVYINIHIEEGPQYHFSGYDVVGKTILPKEKIDSLIQVKKGD EEEEEEECCEEEECCCCCEEEEEEEEECCCCEEECCEEEECCCCCCHHHHHHHHEECCCC IFSRKKVTESISAIGLALGDVGYGFPAINAEPRLDENNKTVFITFVVQPGRHVYVRRINF CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEE HGNTKTGDYVLRNVIRQDEGGLLSLHNIKESERQLRMLGYLKNIDVKTTPVPGTNNQVDL CCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEE DVNVEEAPSAEASASMGYGTNGYQFNASVNQRNFMGSGRSMGAAFNASQWGQDYSFNYYN EECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC PFYTDTGVGRGGSLYYSRIDPKNLNVSTYSSNRYGGDISYNFPLGEKSSFQLGYGYQDIN CEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEECCEEECC IKSVGYVLPIINFVALNGNHFQEIRLTSGWSRNSYDQMPYPNQGFNQQAIAMVALPATSQ EEHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCH SLSYYKSSYQAHLYYPLTRGWIFSVLGNVGYGNTFDNFGLPFFENYYAGGPVQPGQVRGY HHHHHHCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEECC DSYSLGPQDNFGNAMGANFLVNGSVGLILPYPLSRDNVRTTIFADAGNVFASGTPPALRG CCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEEECCCEEECCCCCCCCC TPAGPMRYSAGVSLEWRSPFGPLSFSLAKALNPQPLDQTQLFQFALSSGF CCCCCCEECCCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA