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The map label for this gene is icmO/dotL

Identifier: 54293439

GI number: 54293439

Start: 529093

End: 531444

Strand: Direct

Name: icmO/dotL

Synonym: lpl0488

Alternate gene names: NA

Gene position: 529093-531444 (Clockwise)

Preceding gene: 54293438

Following gene: 54293440

Centisome position: 15.81

GC content: 39.46

Gene sequence:

>2352_bases
ATGATGCGGGGTATTGATTCTCGTCATGAATTAGATCCAACTCTTTTACTCAGGGATACACGTACTTTTACGCAGCGGTT
GGCAGATTTTTTTGCAGATCCGACCAATATTTCTATTGTTCTTATTTCATTAGCAGCTGTTTCATATTATTTCTCTGAAG
CAGCAACATTTTTGCTGATTATGGGGGGTATATCTTTTCTTTATAGCTATACCCGAAAGCAAAAGTTACCATTTCGATTG
CCTCAAATTTCGCGTGCGAAGGATTACAACGATTTAAAACCGGGTATTAATAAACCGAATATAGCTCGAGGTATTACTTT
TTTTGGTAATGACAGAAAGACCGGCGAGGAACTTTGGTTTGCTAACGATGATATGCGTACCCATGCGTTAATTTTCGGTT
CAACGGGTAGCGGTAAAACAGAAACTTTGGTTTCTCTGTCATATAATGCCCTGGTACAGGGGAGCGGGTTTATCTACGTT
GATGGTAAAGGAGATAACTCTCTGTATGCTAAAGTCTTTTCTATGGTAAGGAGCATGGGGCGTGAAGATGATTTGCTCTT
AATCAACTTCATGACTGGAGCGCGCGATATTGTCGGTCCGCAGGAAAAAAGACTTTCCAATACACTAAACCCATTCTGCC
AAGGTTCTTCCAGTATGCTAACTCAGTTGGTAGTTAGTTTGATGGGATCTTCAGGCCAGTCATCTGATGGTGATATGTGG
AAGGGGCGAGCCATCGCTTTCGTAGAAGCATTAATGCGTTTATTGGTGTATATGCGCGATGAAGGCGCAATTCTCCTTGA
TGCAAATACTATTCGGAATTACTTTGATCTGCAAAGATTGGAATCTATTGTAATTGATAAACTTTTTCCCAGAGATGATC
AAGAAAGTGTCAATATTGAAACTATTCCAAAATTGGTAACGGATCCTTTAAGAAACTATTTAAATACTTTGCCTGGGTAT
AATAAGGAGAAAAAGGGGAAGCAGGTATCCCAAGTTTTGGAGCAACATGGTTTTATTACCATGCAGCTGGTAAGAAGTTT
CTCATCTCTGGCAGATACTTATGGTCATATTATTCGTACCAATCTAGCAGAAGTCGATTTTAAAGATGTGGTACTCAACA
GACGTATATTAGTGGTTTTATTACCCGCACTGGAAAAATCACCGGATGAATTATCTAACCTTGGCAAGATTATTGTTTCT
TCACTAAAAGCTATGATGGCGGCAGGTTTAGGCGAAGAAGTAGAAGGTGATTATCGTGATGTTATTCTGAGAAAACCCAC
GAATGCCCCAACTCCTTATATGTGCATTCTTGATGAGTACGGTTATTACGCAGTACAAGGGTTTGCGGTAGTGCCTGCAC
AAGCTCGTTCTCTAGGATTTTCTGCTATTTTTGCTGGACAAGACTTACCTGCATTCCAAAAAGCATCCAAAGAAGAGGCA
GCTTCCATTGGTGCAAACACAAACATTAAAATATGTATGAAACTGGAAGATCCTACCGAAACCTGGGATTTCTTCACTAA
AACAGCTGGCGAAGCTTATGTTACAAAAGTGGATTCGTTTCAAACCAAAGAAACCAGCATAGCCAACAGCTATATGGATA
CTAAAAGCTCTTCTTTTGAAAAGAGAGCTCGGGTAGACCTCCTTGATTTAAAAGAGCAAACCGAAGGTGAGGCGCATATA
TTTTTCAAATCCAAAATTGTTCGTGCTCGCATGTTTTATGCCAATCCAAAACCAGTTAAGCAATTGAAAATTAACCAATT
TTTAAAAGTAGAGCCGCCGCCAGATGATTATTTAATGAAGCTACAGAAACAATTGGCTTCTTTCCAGAGCATTCTTGAAA
GTGGTGACTTGAGTATCAATAAGGCAGTCGAGAACGAAGAAATCACTCTCATTAGTAAGGCATTAAAAGAATCTACTATC
GTAGAGCCAATTGAACGAGGCGTTGCTGCTTTAATTGCATTTCATGGTCAAAATGAACCCGAGCCTGTGGAAGATATTGT
AGAGGAAGAAGTTGAGGGGGCATTAACTATTTTCAGCAAACTACGAATTGACCCTAATGCTCCTCCAATATTAGTCGCTG
ACAAAGAAGTTTTCTCTGAGCCATTATTACCAATTAATGAAACACGAAATCAAATGATAACGATTGAGCGTTTGGCAGGG
GCTAAAGACAAATACGCTGGTACAGTAGCTAATGAATTAATCAAAGATTTTCAAATAGCGACTAGCTATCCTCCTGAAGA
AAGGGATGTGATTGATGTCCAAGAACTTACTGGTGTTATAAGAGATTTATCCGCTAAAATTTCCGCAGAACGTGAGAAAG
CCAATAAAAAGGCTGCAGAGGAATTAACATAA

Upstream 100 bases:

>100_bases
GACGCTCTTTGGTGCCAATGATAGATGAAGCGATTAGAGCTCTGGAAATTGCAGTAAAAGAGGTGAGATTAACACCACGT
CAAATGGAGGAATTAGAGCC

Downstream 100 bases:

>100_bases
AGACTCAGTCGGCAACTGGAGGTAGAAGTGTTCCTGTGCTATTGGGCAAGAAGAGAGCTCCATATGTAAGCTACTCTGAG
TTTTTTATAATCCGGGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Conjugal Transfer Protein; TrbC Conjugal Transfer Protein; IcmO-Like Type IV Secretion System Protein; Type IV Secretion System Protein IcmO/DotL; TrbC-Like Protein; Conjugal Transfer Protein TrbC; TrbC Protein; Conjugal Transfer Protein TraG/TraD/DotL/TrbC/IcmO

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLIMGGISFLYSYTRKQKLPFRL
PQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWFANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYV
DGKGDNSLYAKVFSMVRSMGREDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKLFPRDDQESVNIETIPKLVTDPLRNYLNTLPGY
NKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRTNLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVS
SLKAMMAAGLGEEVEGDYRDVILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFEKRARVDLLDLKEQTEGEAHI
FFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMKLQKQLASFQSILESGDLSINKAVENEEITLISKALKESTI
VEPIERGVAALIAFHGQNEPEPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIERLAG
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGVIRDLSAKISAEREKANKKAAEELT

Sequences:

>Translated_783_residues
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLIMGGISFLYSYTRKQKLPFRL
PQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWFANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYV
DGKGDNSLYAKVFSMVRSMGREDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKLFPRDDQESVNIETIPKLVTDPLRNYLNTLPGY
NKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRTNLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVS
SLKAMMAAGLGEEVEGDYRDVILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFEKRARVDLLDLKEQTEGEAHI
FFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMKLQKQLASFQSILESGDLSINKAVENEEITLISKALKESTI
VEPIERGVAALIAFHGQNEPEPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIERLAG
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGVIRDLSAKISAEREKANKKAAEELT
>Mature_783_residues
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLIMGGISFLYSYTRKQKLPFRL
PQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWFANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYV
DGKGDNSLYAKVFSMVRSMGREDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKLFPRDDQESVNIETIPKLVTDPLRNYLNTLPGY
NKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRTNLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVS
SLKAMMAAGLGEEVEGDYRDVILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFEKRARVDLLDLKEQTEGEAHI
FFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMKLQKQLASFQSILESGDLSINKAVENEEITLISKALKESTI
VEPIERGVAALIAFHGQNEPEPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIERLAG
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGVIRDLSAKISAEREKANKKAAEELT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87444; Mature: 87444

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLI
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGGISFLYSYTRKQKLPFRLPQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEECCCCCCCCCEEE
ANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYVDGKGDNSLYAKVFSMVRSMG
ECCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCC
REDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
CCCCEEEEEECCCCCHHCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKLFPRDDQESVNIE
CCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
TIPKLVTDPLRNYLNTLPGYNKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRT
HHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVSSLKAMMAAGLGEEVEGDYRD
HHHHCCHHHHHHCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
EEEECCCCCCCCEEEEEECCCCEEEECEEEECHHHHHCCCEEEECCCCCCHHHHHCHHHH
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFE
HHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHH
KRARVDLLDLKEQTEGEAHIFFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMK
HHHCCHHHHHHHCCCCCEEEEEHHHHHHHHHEECCCCCHHHHHCCCEEECCCCCHHHHHH
LQKQLASFQSILESGDLSINKAVENEEITLISKALKESTIVEPIERGVAALIAFHGQNEP
HHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIERLAG
CHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHCCCCCCCCCCCCEEEHHHHCC
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGVIRDLSAKISAEREKANKKAAE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELT
HCC
>Mature Secondary Structure
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLI
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGGISFLYSYTRKQKLPFRLPQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEECCCCCCCCCEEE
ANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYVDGKGDNSLYAKVFSMVRSMG
ECCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCC
REDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
CCCCEEEEEECCCCCHHCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKLFPRDDQESVNIE
CCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
TIPKLVTDPLRNYLNTLPGYNKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRT
HHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVSSLKAMMAAGLGEEVEGDYRD
HHHHCCHHHHHHCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
EEEECCCCCCCCEEEEEECCCCEEEECEEEECHHHHHCCCEEEECCCCCCHHHHHCHHHH
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFE
HHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHH
KRARVDLLDLKEQTEGEAHIFFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMK
HHHCCHHHHHHHCCCCCEEEEEHHHHHHHHHEECCCCCHHHHHCCCEEECCCCCHHHHHH
LQKQLASFQSILESGDLSINKAVENEEITLISKALKESTIVEPIERGVAALIAFHGQNEP
HHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIERLAG
CHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHCCCCCCCCCCCCEEEHHHHCC
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGVIRDLSAKISAEREKANKKAAE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELT
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA