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The map label for this gene is recA

Identifier: 54020324

GI number: 54020324

Start: 53512

End: 54525

Strand: Reverse

Name: recA

Synonym: mhp041

Alternate gene names: 54020324

Gene position: 54525-53512 (Counterclockwise)

Preceding gene: 54020325

Following gene: 54020323

Centisome position: 6.11

GC content: 34.32

Gene sequence:

>1014_bases
ATGACTGAAATTAACGAAAAATCATTATTAAAACAAGCGCTTGCAGAAATTAAAAAGAAATTTGGTAACGAATCAATTAT
GGTTTTAGGTGAAAAGCCGCCAATTGATACAGAAGTTTTTTCATCTGGGAGTATGGCTATCGATATGGCTCTTGGAATTG
GTGGTTTTCCGAAAGGAAGAATTATTGAGATTTATGGTCCTGAATCATCAGGGAAAACCACAATTAGTCTCCATGCCATT
GCTGAAGTCCAAAAACAGGGAGGAATCGCCGCCTTTATTGATGCAGAACACTCAATTGATCCACAGTATGCAAAAAATTT
AGGAATTGATATCGATAATTTAATACTTTCACAGCCAGACTCTGGCGAACAAGCTTTAGACATTGTCGATACATTAACAA
AAACAAAAGCAATTGATCTAATTGTAGTTGACTCTGTTGCTGCATTAGTGCCAATGGCTGAACTTCAAGGAGAAATGAAA
GATCAAGTAATAGGAGCACAAGCTCGACTGATGTCAAAAGCGCTCCGAAAAATCACAGCATCTCTAAATAAAAACGGGAC
AACTGTAATTTTTATTAACCAAATTAGGGAAAAAGTTGGAGTAATTTTTGGTAATCCTGAAACTACTCCTGGTGGAAGAG
GACTCAAATTTTATGCTTCAATCAGGTTAGATGTTAGAAAAATTCAACAAATAACAAGTGGAAACGACATCACCGGGCAT
AGTGTAAAAATCAAAGTAGTAAAAAATAAGCTTGCAATTCCTTTTAAAACTGCTTTAGTTGAAATTGTTTTTGCCAAAGG
TATTTCAAAATCAGCAGAAATTGCCCAATTAGGCGAGGAACTTGGAATTCTTGTACGAAAAGGTTCGTGATTTGCATATA
AGGGAGAGAATATCGCCCAAGGTAAAGTGAATTTAAAATTACTACTTGAAAATAATACCAAATTATTTAATGAAATAAAG
GATCAAATTATTGAAAAACTAAAGGAAAATCAACAACAATCCCAAACATTATAG

Upstream 100 bases:

>100_bases
TTTTTCCTAAATTTTTCCATTTTTTATTAAAATGTTTAAAAAATCTTAAATTAGAATAAGCAACAAACCAAAACCGAAAA
ATTAAAAAAAGGAAACAATT

Downstream 100 bases:

>100_bases
TAAAATTATTATTATAATGCATAAATTTATAAAATGATTTTTTTACTATTGTTTCTTAGTAATATTTTTAGTTGCTTTTA
GTGCCACAATTTATTTAATT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTEINEKSLLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGRIIEIYGPESSGKTTISLHAI
AEVQKQGGIAAFIDAEHSIDPQYAKNLGIDIDNLILSQPDSGEQALDIVDTLTKTKAIDLIVVDSVAALVPMAELQGEMK
DQVIGAQARLMSKALRKITASLNKNGTTVIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGH
SVKIKVVKNKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGSWFAYKGENIAQGKVNLKLLLENNTKLFNEIK
DQIIEKLKENQQQSQTL

Sequences:

>Translated_337_residues
MTEINEKSLLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGRIIEIYGPESSGKTTISLHAI
AEVQKQGGIAAFIDAEHSIDPQYAKNLGIDIDNLILSQPDSGEQALDIVDTLTKTKAIDLIVVDSVAALVPMAELQGEMK
DQVIGAQARLMSKALRKITASLNKNGTTVIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGH
SVKIKVVKNKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGS*FAYKGENIAQGKVNLKLLLENNTKLFNEIK
DQIIEKLKENQQQSQTL
>Mature_336_residues
TEINEKSLLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGRIIEIYGPESSGKTTISLHAIA
EVQKQGGIAAFIDAEHSIDPQYAKNLGIDIDNLILSQPDSGEQALDIVDTLTKTKAIDLIVVDSVAALVPMAELQGEMKD
QVIGAQARLMSKALRKITASLNKNGTTVIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGHS
VKIKVVKNKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGS*FAYKGENIAQGKVNLKLLLENNTKLFNEIKD
QIIEKLKENQQQSQTL

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=326, Percent_Identity=51.840490797546, Blast_Score=353, Evalue=6e-99,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 36404; Mature: 36273

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEINEKSLLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGR
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCCC
IIEIYGPESSGKTTISLHAIAEVQKQGGIAAFIDAEHSIDPQYAKNLGIDIDNLILSQPD
EEEEECCCCCCCEEEEEHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCHHHHEECCCC
SGEQALDIVDTLTKTKAIDLIVVDSVAALVPMAELQGEMKDQVIGAQARLMSKALRKITA
CCHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLNKNGTTVIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGH
HHCCCCCEEEEEHHHHHHHCEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCC
SVKIKVVKNKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGSFAYKGENIAQG
EEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEECCCCEECCCCEECC
KVNLKLLLENNTKLFNEIKDQIIEKLKENQQQSQTL
EEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEINEKSLLKQALAEIKKKFGNESIMVLGEKPPIDTEVFSSGSMAIDMALGIGGFPKGR
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCCC
IIEIYGPESSGKTTISLHAIAEVQKQGGIAAFIDAEHSIDPQYAKNLGIDIDNLILSQPD
EEEEECCCCCCCEEEEEHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCHHHHEECCCC
SGEQALDIVDTLTKTKAIDLIVVDSVAALVPMAELQGEMKDQVIGAQARLMSKALRKITA
CCHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLNKNGTTVIFINQIREKVGVIFGNPETTPGGRGLKFYASIRLDVRKIQQITSGNDITGH
HHCCCCCEEEEEHHHHHHHCEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCC
SVKIKVVKNKLAIPFKTALVEIVFAKGISKSAEIAQLGEELGILVRKGSFAYKGENIAQG
EEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEECCCCEECCCCEECC
KVNLKLLLENNTKLFNEIKDQIIEKLKENQQQSQTL
EEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA