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The map label for this gene is gidB

Identifier: 54020291

GI number: 54020291

Start: 850190

End: 850798

Strand: Direct

Name: gidB

Synonym: mhp676

Alternate gene names: 54020291

Gene position: 850190-850798 (Clockwise)

Preceding gene: 54020290

Following gene: 54020292

Centisome position: 95.23

GC content: 24.3

Gene sequence:

>609_bases
ATGTATAAGCGATTAGTTCAGGAATTTTTTCCTAAATTAGATTTTGAAAATTTAGAAAAATACGTAAATTTAATTGAATT
TAGTAATAAAAACTTTAATTTAACCGCCTTTTCTGGTGATATTCTCTGAAAAGAGGGAATTTTTGAGTCAATTTTTACAA
TGAATTTCATTGTTGGTCTAGTAAATAATAAAGAAAATAAAAAATTAAAAATTTTGGATATTGGGGCTGGATCAGGTTTT
CCTTCAATTCCTTTTTTGATTACAAACCCAGAAATTGAGCTAACAATTTCTGAGTCAATGCAAAAAAGATGCCAGTTTTT
AAAGGATATTTCTGAAAAATTAGATTTGAAATTCAATTTAATTTGCAAACCAGTTCAGGAAATTAATCCACAAAAATTTG
ATATAATAACTGCCAGAGCAGTGGCAAATTTAGAAAAGCTTGAGAAAATTACAAAAAAAATTCATTTTCCAAAAACGCTT
TTAGCTTTTATTAAAGGGCCCAAAGTTTTTAATGAAGTTCAAAATTGTAAAAATTGTAATTATAAAATCATTAAAGTTAA
TAATAATATAAATAAAAAAATTTTTATCGCATTTAAACAAGTTTCTTAA

Upstream 100 bases:

>100_bases
GCCTGCATTTTTTCGACTTCAATTACAAGTATTTATGAAGAAACTAAGCAAAAATTAATTAAAAAGAACCTAAATTAAAC
ATTTTTTTAAAAGATTTGAA

Downstream 100 bases:

>100_bases
TAATTTTGAATTTTAATTTAGAAAATATAAAAATCTTGTTGATTTTTATATAATTTTTTAACCTTTTTTTTTTTTTTTTT
TTTTTTAGGAATATGGTAAA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MYKRLVQEFFPKLDFENLEKYVNLIEFSNKNFNLTAFSGDILWKEGIFESIFTMNFIVGLVNNKENKKLKILDIGAGSGF
PSIPFLITNPEIELTISESMQKRCQFLKDISEKLDLKFNLICKPVQEINPQKFDIITARAVANLEKLEKITKKIHFPKTL
LAFIKGPKVFNEVQNCKNCNYKIIKVNNNINKKIFIAFKQVS

Sequences:

>Translated_202_residues
MYKRLVQEFFPKLDFENLEKYVNLIEFSNKNFNLTAFSGDIL*KEGIFESIFTMNFIVGLVNNKENKKLKILDIGAGSGF
PSIPFLITNPEIELTISESMQKRCQFLKDISEKLDLKFNLICKPVQEINPQKFDIITARAVANLEKLEKITKKIHFPKTL
LAFIKGPKVFNEVQNCKNCNYKIIKVNNNINKKIFIAFKQVS
>Mature_202_residues
MYKRLVQEFFPKLDFENLEKYVNLIEFSNKNFNLTAFSGDIL*KEGIFESIFTMNFIVGLVNNKENKKLKILDIGAGSGF
PSIPFLITNPEIELTISESMQKRCQFLKDISEKLDLKFNLICKPVQEINPQKFDIITARAVANLEKLEKITKKIHFPKTL
LAFIKGPKVFNEVQNCKNCNYKIIKVNNNINKKIFIAFKQVS

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: 2.1.-.-

Molecular weight: Translated: 23230; Mature: 23230

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKRLVQEFFPKLDFENLEKYVNLIEFSNKNFNLTAFSGDILKEGIFESIFTMNFIVGLV
CHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
NNKENKKLKILDIGAGSGFPSIPFLITNPEIELTISESMQKRCQFLKDISEKLDLKFNLI
CCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEE
CKPVQEINPQKFDIITARAVANLEKLEKITKKIHFPKTLLAFIKGPKVFNEVQNCKNCNY
ECCHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCE
KIIKVNNNINKKIFIAFKQVS
EEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MYKRLVQEFFPKLDFENLEKYVNLIEFSNKNFNLTAFSGDILKEGIFESIFTMNFIVGLV
CHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
NNKENKKLKILDIGAGSGFPSIPFLITNPEIELTISESMQKRCQFLKDISEKLDLKFNLI
CCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEE
CKPVQEINPQKFDIITARAVANLEKLEKITKKIHFPKTLLAFIKGPKVFNEVQNCKNCNY
ECCHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCE
KIIKVNNNINKKIFIAFKQVS
EEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA