Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
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Accession | NC_006350 |
Length | 4,074,542 |
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The map label for this gene is 53719598
Identifier: 53719598
GI number: 53719598
Start: 2368983
End: 2369369
Strand: Reverse
Name: 53719598
Synonym: BPSL1986
Alternate gene names: NA
Gene position: 2369369-2368983 (Counterclockwise)
Preceding gene: 53719599
Following gene: 53719597
Centisome position: 58.15
GC content: 70.54
Gene sequence:
>387_bases ATGCTGTTCAGATCGGGAACGATTCGGATACCGTTCGAGCCGAACGACAAGGCGCGCGAGCGCGAGCGGCCGATCCAGCG CGTCGAGCTCGATCCCGAGCATGACCGCCATGCGCGCGCCGCGTTGGAAGCGTATGCGGATTCGAGCGCGCACGAGATGC CGTGGCTTGCCGAATGGATGCGCGAAGCGCTCGGCAGCCCGCAGCCGGAGCTCACGCGCTGCGCGCAAACCGTCGAACGC GTGTTCGACCTGGCGCACGCCTGGGCGGCGGGGCAGCCGGACTATGCGGGCGCCGCGTGGGAGCACGTGCGCGGCCGCCT GCTCGAGGCGCTGCAGCATGCGCCGCGTGCGATCGCACCCGACGCGCTCGAAACCGATCCCGCCTGA
Upstream 100 bases:
>100_bases TCTCGTCTGCAGAATCGCGCCGCGCCGCGCGGCCGCTGCGAGCGGGGCGTATCGCGGCGGACACGCTCGCGCGGGTCGCC GCGGCAAACAGGGGGAGGTC
Downstream 100 bases:
>100_bases CGGGCGTCCCGCTGCCGTGCTCGCCGGGCGTGCAGCCGGCGGTGCGGTACGCACGCGCTCACCGCGTTGACATAATTACG AGGCAATACGCACATATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MLFRSGTIRIPFEPNDKARERERPIQRVELDPEHDRHARAALEAYADSSAHEMPWLAEWMREALGSPQPELTRCAQTVER VFDLAHAWAAGQPDYAGAAWEHVRGRLLEALQHAPRAIAPDALETDPA
Sequences:
>Translated_128_residues MLFRSGTIRIPFEPNDKARERERPIQRVELDPEHDRHARAALEAYADSSAHEMPWLAEWMREALGSPQPELTRCAQTVER VFDLAHAWAAGQPDYAGAAWEHVRGRLLEALQHAPRAIAPDALETDPA >Mature_128_residues MLFRSGTIRIPFEPNDKARERERPIQRVELDPEHDRHARAALEAYADSSAHEMPWLAEWMREALGSPQPELTRCAQTVER VFDLAHAWAAGQPDYAGAAWEHVRGRLLEALQHAPRAIAPDALETDPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14483; Mature: 14483
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFRSGTIRIPFEPNDKARERERPIQRVELDPEHDRHARAALEAYADSSAHEMPWLAEWM CCCCCCCEEECCCCCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH REALGSPQPELTRCAQTVERVFDLAHAWAAGQPDYAGAAWEHVRGRLLEALQHAPRAIAP HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC DALETDPA CCCCCCCC >Mature Secondary Structure MLFRSGTIRIPFEPNDKARERERPIQRVELDPEHDRHARAALEAYADSSAHEMPWLAEWM CCCCCCCEEECCCCCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH REALGSPQPELTRCAQTVERVFDLAHAWAAGQPDYAGAAWEHVRGRLLEALQHAPRAIAP HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC DALETDPA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA