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The map label for this gene is yybS [H]

Identifier: 52788027

GI number: 52788027

Start: 4201331

End: 4202260

Strand: Reverse

Name: yybS [H]

Synonym: BLi04355

Alternate gene names: 52788027

Gene position: 4202260-4201331 (Counterclockwise)

Preceding gene: 52788028

Following gene: 52788026

Centisome position: 99.52

GC content: 43.33

Gene sequence:

>930_bases
GTGAAACAAACAAGAGCTTTAGTAGAAGGCGCTATCATGGTCAGTATTTTTGCCGTTTTGCTGATGATCAGCCTCTATAT
TCCTTTCATCGGAACCATTCTTTTATTGACGCTGCCGCTGCCTGCAATGGTTCAAACGATCAGGCACGGTCTAAAGCCGG
GGATTTCGGTGGGGTTGGTCAGTTTACCCGTTTCATTGATTGCCGGTTCCTTAGGCGGACTGATGTTTGCTATTCCAGTA
AGTGCCGCGGGCGTGATCATGGGCTTTTACTACAGAAGAAAAGAGCCGGCCCAAGCGATTGCTGCAGCAGCCGTTACATA
TATGGTTTCGTTCGTCCTGCTGCTTATCATCAGCGTTCAGTTTCTTGGATTAAACTTAATAGAGACGGCCAATCAAGCAT
ATAATGAAACATTCAAAACCTTTGAATCGAGTATCAAACAGTTTGGAAATGATAAAGAAGTGGCTAAGCAGATTGAATTG
TTAAATGAGCAATTCAAACAGGCGCAATATTTATATCCAACGGCCATTGTGATATTTTCCGGAATCACTGCGTTTTTGAA
TCATCTGCTCGCAAAGCCGGTGCTTCGGCGCATCATACAAATACCGTCTCTGAAACCGTTCAGGGATATGAGACTTCCGC
AAAGCATTATTTGGATCTATTTGTTGACGATTCTTCTGTCGCTGGCTCCCGTTGAAGAGGGCAGTGTATATTACTCTGTT
CTGTTAAATGCGAGTCTCATCATGGGCTTTGTCTTGGTCATCCAAGGGTTTTCATTTGTGTTTTACTTTTGCCATGCCAA
GAAACTGCCAACTGTCCTGCCGGTTCTTTTTTTAATTATCGGGTTGTTTTCGCCCCTGCTGTACCTTGTTCGCATCTTAG
GTATAATTGATATAGGCTTTAACTTGAGAGAAAGAGTGAAAAAATCGTAG

Upstream 100 bases:

>100_bases
TCATCGTCTTTATTTGAAAATGAAATTGCGACGTTAGAAAAGAGCAGTCGTCTATGCTGCTCTTTTTGATTCATGACATT
TCAACATACGAGGTGAACAA

Downstream 100 bases:

>100_bases
CCGCGATGTTCTCCAATGGTGAGGAGTTGATTTGAGTGCCAAGTTTTTATGAAAAACCGTTATTTCGATATCCCATATAT
TCTTTAATCGTCGTCACAAT

Product: YybS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKQTRALVEGAIMVSIFAVLLMISLYIPFIGTILLLTLPLPAMVQTIRHGLKPGISVGLVSLPVSLIAGSLGGLMFAIPV
SAAGVIMGFYYRRKEPAQAIAAAAVTYMVSFVLLLIISVQFLGLNLIETANQAYNETFKTFESSIKQFGNDKEVAKQIEL
LNEQFKQAQYLYPTAIVIFSGITAFLNHLLAKPVLRRIIQIPSLKPFRDMRLPQSIIWIYLLTILLSLAPVEEGSVYYSV
LLNASLIMGFVLVIQGFSFVFYFCHAKKLPTVLPVLFLIIGLFSPLLYLVRILGIIDIGFNLRERVKKS

Sequences:

>Translated_309_residues
MKQTRALVEGAIMVSIFAVLLMISLYIPFIGTILLLTLPLPAMVQTIRHGLKPGISVGLVSLPVSLIAGSLGGLMFAIPV
SAAGVIMGFYYRRKEPAQAIAAAAVTYMVSFVLLLIISVQFLGLNLIETANQAYNETFKTFESSIKQFGNDKEVAKQIEL
LNEQFKQAQYLYPTAIVIFSGITAFLNHLLAKPVLRRIIQIPSLKPFRDMRLPQSIIWIYLLTILLSLAPVEEGSVYYSV
LLNASLIMGFVLVIQGFSFVFYFCHAKKLPTVLPVLFLIIGLFSPLLYLVRILGIIDIGFNLRERVKKS
>Mature_309_residues
MKQTRALVEGAIMVSIFAVLLMISLYIPFIGTILLLTLPLPAMVQTIRHGLKPGISVGLVSLPVSLIAGSLGGLMFAIPV
SAAGVIMGFYYRRKEPAQAIAAAAVTYMVSFVLLLIISVQFLGLNLIETANQAYNETFKTFESSIKQFGNDKEVAKQIEL
LNEQFKQAQYLYPTAIVIFSGITAFLNHLLAKPVLRRIIQIPSLKPFRDMRLPQSIIWIYLLTILLSLAPVEEGSVYYSV
LLNASLIMGFVLVIQGFSFVFYFCHAKKLPTVLPVLFLIIGLFSPLLYLVRILGIIDIGFNLRERVKKS

Specific function: Unknown

COG id: COG4241

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018710 [H]

Pfam domain/function: PF09991 DUF2232 [H]

EC number: NA

Molecular weight: Translated: 34274; Mature: 34274

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTRALVEGAIMVSIFAVLLMISLYIPFIGTILLLTLPLPAMVQTIRHGLKPGISVGLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
SLPVSLIAGSLGGLMFAIPVSAAGVIMGFYYRRKEPAQAIAAAAVTYMVSFVLLLIISVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLGLNLIETANQAYNETFKTFESSIKQFGNDKEVAKQIELLNEQFKQAQYLYPTAIVIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GITAFLNHLLAKPVLRRIIQIPSLKPFRDMRLPQSIIWIYLLTILLSLAPVEEGSVYYSV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLNASLIMGFVLVIQGFSFVFYFCHAKKLPTVLPVLFLIIGLFSPLLYLVRILGIIDIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLRERVKKS
HHHHHHCCC
>Mature Secondary Structure
MKQTRALVEGAIMVSIFAVLLMISLYIPFIGTILLLTLPLPAMVQTIRHGLKPGISVGLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
SLPVSLIAGSLGGLMFAIPVSAAGVIMGFYYRRKEPAQAIAAAAVTYMVSFVLLLIISVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLGLNLIETANQAYNETFKTFESSIKQFGNDKEVAKQIELLNEQFKQAQYLYPTAIVIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GITAFLNHLLAKPVLRRIIQIPSLKPFRDMRLPQSIIWIYLLTILLSLAPVEEGSVYYSV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLNASLIMGFVLVIQGFSFVFYFCHAKKLPTVLPVLFLIIGLFSPLLYLVRILGIIDIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLRERVKKS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]