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The map label for this gene is yybT [H]

Identifier: 52788026

GI number: 52788026

Start: 4199313

End: 4201295

Strand: Reverse

Name: yybT [H]

Synonym: BLi04354

Alternate gene names: 52788026

Gene position: 4201295-4199313 (Counterclockwise)

Preceding gene: 52788027

Following gene: 52788025

Centisome position: 99.49

GC content: 46.6

Gene sequence:

>1983_bases
GTGCCAAGTTTTTATGAAAAACCGTTATTTCGATATCCCATATATTCTTTAATCGTCGTCACAATCATTTCTGTCCTCAT
CAACATTTATTTTAATTGGGTGGCAGGGGCGGCCGGCGTTCTGATTCTGGGTGTCATTTTGTACTTTTTGAAGCGGGCCG
ACTCCCAAATCAGAAAAGAGCTGGACGATTATATATCGACGCTGTCTTATCGTCTGAAAAAAGTCGGAGAAGAGGCGCTG
CTTGAAATGCCGATCGGGATCATGCTGTTTAACGATCAGTACTATATCGAGTGGGCCAATCCTTTTATGGCGTCATGCTT
TAATGAAAATACGCTCGTCGGCCGGTCGCTTTATGATACTTGTGAATCTGTCGTCCCTTTGATTAAGCAGGAAGTGGACA
CAGAAACGATTACGCTGAATGAGCGGAAATTTAATGTGGTCATCAAACGGGAAGAAAAGCTGCTTTATTTCTTTGATGTC
ACAGAGCAGACGCAGATTGAAAAACAATACGAAAATGAAAGAACGGTTCTTGCCTACATCTTTCTCGATAATTACGACGA
TGTGACGCAAGGGCTTGATGACCAGACCAGAAGCTCGATAAACAGTGAAGTAACATCGCTTTTGAACCAGTGGGCCCAAG
AGTACGGCATTTTCTTAAAACGGGTTTCCTCTGAGCGGTTCATCGGCGTATTAAACGAACATATTTTAAGCGAGCTAGAA
GCATCAAAGTTTTCGATTCTTGATGAAGTTCGGGAGAAGACATCCGTTCATACCATTTCCTTGACGTTAAGCATCGGAAT
CGGTGCATCTGTTGCCTCGTTGAAAGAGCTCGGCGATTTGGCGCAATCCAGCCTTGACTTGGCGCTGGGACGCGGAGGAG
ATCAGGTGGCAATCAAGCAGCCGAACGGGAAAGTGAAGTTTTACGGCGGTAAGACGAATCCTATGGAAAAACGGACGCGC
GTCAGAGCCCGGGTCATTTCACACGCGCTCAAGGAGATTGTCTCTGAAAGCAGCAATGTGATAATCATGGGTCATAAGTT
TCCCGATATGGATTCGATCGGATCAGCCATCGGGATTTTGAAGGTCGCACAGGCAAACGGCAAAGACGGCTTTGTCGTGA
TCGACTCCAATCAGATCGGTTCAAGTGTTCAAAGACTGATCGGGGAGATTAAAAAATACGAAGAACTGTGGTCCAGGTTT
ATTACGCCGGAAGAGGCGCTTGAGATCGCAAAAGACGACACGCTGCTCGTGATCGTTGATACGCATAAGCCTTCTTTTGT
CATTGAAGAAAGGCTGGTCAATAAAATTGAAAATATCGTCGTTATCGATCATCATAGAAGAGGGGAAGAGTTTATTAAAG
ACCCGCTGCTTGTCTATATGGAGCCGTACGCTTCATCTACAGCGGAGCTTGTGACAGAGCTGCTCGAATACCAGCCGAAG
CGCTTAAAAATCAACATGATCGAAGCAACAGCTCTTTTGGCCGGGATTATTGTCGATACGAAGAGCTTCTCGCTGCGCAC
CGGCTCCCGTACGTTCGATGCGGCGTCTTATCTGCGCGCAAAAGGCGCTGACACTGTATTGGTGCAAAAGTTTTTAAAAG
AAACGGCCGATCATTATATTAAAAGGGCGAAGCTTATCCAGCATACCGTTTTTTATCAAAACGGCATCGCCATTGCATCG
CTGCCGGACGATGAGGCGGACGAATACTTTGACCAGGTTATCATTGCACAAGCCGCGGATTCTCTTCTGTCTATGAGCGA
TGTCGAAGCGTCATTTGCTGTGGCGAGAAGAGACGAGAACACGGTATGTATCAGCGCAAGATCGCTCGGCGAAGTAAATG
TTCAAATCATTATGGAAGCGCTCGAGGGCGGCGGTCATTTAACCAATGCTGCGACACAGCTGACCGATATCACGGTTGAA
GAAACGCTCCGCCGACTGAAAGAAGCGATTGACGAGTATTTCGAAGGAGGCATTCAGAAATGA

Upstream 100 bases:

>100_bases
TTGTTCGCATCTTAGGTATAATTGATATAGGCTTTAACTTGAGAGAAAGAGTGAAAAAATCGTAGCCGCGATGTTCTCCA
ATGGTGAGGAGTTGATTTGA

Downstream 100 bases:

>100_bases
AGGTAATTTTCTTACAGGATGTTAAAGGCAAAGGGAAAAAAGGCGAAGTGAAAAATGTAGCGGATGGATACGCGCACAAC
TTTTTGATCAAAAAAGGGCT

Product: YybT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 659

Protein sequence:

>660_residues
MPSFYEKPLFRYPIYSLIVVTIISVLINIYFNWVAGAAGVLILGVILYFLKRADSQIRKELDDYISTLSYRLKKVGEEAL
LEMPIGIMLFNDQYYIEWANPFMASCFNENTLVGRSLYDTCESVVPLIKQEVDTETITLNERKFNVVIKREEKLLYFFDV
TEQTQIEKQYENERTVLAYIFLDNYDDVTQGLDDQTRSSINSEVTSLLNQWAQEYGIFLKRVSSERFIGVLNEHILSELE
ASKFSILDEVREKTSVHTISLTLSIGIGASVASLKELGDLAQSSLDLALGRGGDQVAIKQPNGKVKFYGGKTNPMEKRTR
VRARVISHALKEIVSESSNVIIMGHKFPDMDSIGSAIGILKVAQANGKDGFVVIDSNQIGSSVQRLIGEIKKYEELWSRF
ITPEEALEIAKDDTLLVIVDTHKPSFVIEERLVNKIENIVVIDHHRRGEEFIKDPLLVYMEPYASSTAELVTELLEYQPK
RLKINMIEATALLAGIIVDTKSFSLRTGSRTFDAASYLRAKGADTVLVQKFLKETADHYIKRAKLIQHTVFYQNGIAIAS
LPDDEADEYFDQVIIAQAADSLLSMSDVEASFAVARRDENTVCISARSLGEVNVQIIMEALEGGGHLTNAATQLTDITVE
ETLRRLKEAIDEYFEGGIQK

Sequences:

>Translated_660_residues
MPSFYEKPLFRYPIYSLIVVTIISVLINIYFNWVAGAAGVLILGVILYFLKRADSQIRKELDDYISTLSYRLKKVGEEAL
LEMPIGIMLFNDQYYIEWANPFMASCFNENTLVGRSLYDTCESVVPLIKQEVDTETITLNERKFNVVIKREEKLLYFFDV
TEQTQIEKQYENERTVLAYIFLDNYDDVTQGLDDQTRSSINSEVTSLLNQWAQEYGIFLKRVSSERFIGVLNEHILSELE
ASKFSILDEVREKTSVHTISLTLSIGIGASVASLKELGDLAQSSLDLALGRGGDQVAIKQPNGKVKFYGGKTNPMEKRTR
VRARVISHALKEIVSESSNVIIMGHKFPDMDSIGSAIGILKVAQANGKDGFVVIDSNQIGSSVQRLIGEIKKYEELWSRF
ITPEEALEIAKDDTLLVIVDTHKPSFVIEERLVNKIENIVVIDHHRRGEEFIKDPLLVYMEPYASSTAELVTELLEYQPK
RLKINMIEATALLAGIIVDTKSFSLRTGSRTFDAASYLRAKGADTVLVQKFLKETADHYIKRAKLIQHTVFYQNGIAIAS
LPDDEADEYFDQVIIAQAADSLLSMSDVEASFAVARRDENTVCISARSLGEVNVQIIMEALEGGGHLTNAATQLTDITVE
ETLRRLKEAIDEYFEGGIQK
>Mature_659_residues
PSFYEKPLFRYPIYSLIVVTIISVLINIYFNWVAGAAGVLILGVILYFLKRADSQIRKELDDYISTLSYRLKKVGEEALL
EMPIGIMLFNDQYYIEWANPFMASCFNENTLVGRSLYDTCESVVPLIKQEVDTETITLNERKFNVVIKREEKLLYFFDVT
EQTQIEKQYENERTVLAYIFLDNYDDVTQGLDDQTRSSINSEVTSLLNQWAQEYGIFLKRVSSERFIGVLNEHILSELEA
SKFSILDEVREKTSVHTISLTLSIGIGASVASLKELGDLAQSSLDLALGRGGDQVAIKQPNGKVKFYGGKTNPMEKRTRV
RARVISHALKEIVSESSNVIIMGHKFPDMDSIGSAIGILKVAQANGKDGFVVIDSNQIGSSVQRLIGEIKKYEELWSRFI
TPEEALEIAKDDTLLVIVDTHKPSFVIEERLVNKIENIVVIDHHRRGEEFIKDPLLVYMEPYASSTAELVTELLEYQPKR
LKINMIEATALLAGIIVDTKSFSLRTGSRTFDAASYLRAKGADTVLVQKFLKETADHYIKRAKLIQHTVFYQNGIAIASL
PDDEADEYFDQVIIAQAADSLLSMSDVEASFAVARRDENTVCISARSLGEVNVQIIMEALEGGGHLTNAATQLTDITVEE
TLRRLKEAIDEYFEGGIQK

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 74267; Mature: 74136

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFYEKPLFRYPIYSLIVVTIISVLINIYFNWVAGAAGVLILGVILYFLKRADSQIRKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDDYISTLSYRLKKVGEEALLEMPIGIMLFNDQYYIEWANPFMASCFNENTLVGRSLYDT
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHCCCCCEECHHHHHH
CESVVPLIKQEVDTETITLNERKFNVVIKREEKLLYFFDVTEQTQIEKQYENERTVLAYI
HHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEE
FLDNYDDVTQGLDDQTRSSINSEVTSLLNQWAQEYGIFLKRVSSERFIGVLNEHILSELE
EECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASKFSILDEVREKTSVHTISLTLSIGIGASVASLKELGDLAQSSLDLALGRGGDQVAIKQ
HHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PNGKVKFYGGKTNPMEKRTRVRARVISHALKEIVSESSNVIIMGHKFPDMDSIGSAIGIL
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
KVAQANGKDGFVVIDSNQIGSSVQRLIGEIKKYEELWSRFITPEEALEIAKDDTLLVIVD
HEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEE
THKPSFVIEERLVNKIENIVVIDHHRRGEEFIKDPLLVYMEPYASSTAELVTELLEYQPK
CCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCC
RLKINMIEATALLAGIIVDTKSFSLRTGSRTFDAASYLRAKGADTVLVQKFLKETADHYI
EEEEEHHHHHHHHHHHHEECCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KRAKLIQHTVFYQNGIAIASLPDDEADEYFDQVIIAQAADSLLSMSDVEASFAVARRDEN
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TVCISARSLGEVNVQIIMEALEGGGHLTNAATQLTDITVEETLRRLKEAIDEYFEGGIQK
EEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PSFYEKPLFRYPIYSLIVVTIISVLINIYFNWVAGAAGVLILGVILYFLKRADSQIRKE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDDYISTLSYRLKKVGEEALLEMPIGIMLFNDQYYIEWANPFMASCFNENTLVGRSLYDT
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHCCCCCEECHHHHHH
CESVVPLIKQEVDTETITLNERKFNVVIKREEKLLYFFDVTEQTQIEKQYENERTVLAYI
HHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEE
FLDNYDDVTQGLDDQTRSSINSEVTSLLNQWAQEYGIFLKRVSSERFIGVLNEHILSELE
EECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASKFSILDEVREKTSVHTISLTLSIGIGASVASLKELGDLAQSSLDLALGRGGDQVAIKQ
HHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PNGKVKFYGGKTNPMEKRTRVRARVISHALKEIVSESSNVIIMGHKFPDMDSIGSAIGIL
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
KVAQANGKDGFVVIDSNQIGSSVQRLIGEIKKYEELWSRFITPEEALEIAKDDTLLVIVD
HEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEE
THKPSFVIEERLVNKIENIVVIDHHRRGEEFIKDPLLVYMEPYASSTAELVTELLEYQPK
CCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCC
RLKINMIEATALLAGIIVDTKSFSLRTGSRTFDAASYLRAKGADTVLVQKFLKETADHYI
EEEEEHHHHHHHHHHHHEECCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KRAKLIQHTVFYQNGIAIASLPDDEADEYFDQVIIAQAADSLLSMSDVEASFAVARRDEN
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TVCISARSLGEVNVQIIMEALEGGGHLTNAATQLTDITVEETLRRLKEAIDEYFEGGIQK
EEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]