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The map label for this gene is yycH [H]

Identifier: 52788009

GI number: 52788009

Start: 4182859

End: 4184223

Strand: Reverse

Name: yycH [H]

Synonym: BLi04333

Alternate gene names: 52788009

Gene position: 4184223-4182859 (Counterclockwise)

Preceding gene: 52788010

Following gene: 52788008

Centisome position: 99.09

GC content: 41.9

Gene sequence:

>1365_bases
ATGAAGCGTGAAACAATTAAAACGATAATACTGTCCCTTTTGGTTTTGATCAGTCTTCTTTTTACTTTTAATATTTGGGG
ATTTCAGGGGAATTACGAAAAAGTTGAAGACTCACAGGCTCAGGTCAGCGACAAACAGCCGATTACAAACCAGACAAAGT
TGTTAAATGAAGCCGTCAAACCGCAGCAAATGTTCATTCATGAGAATGGACAGCATTATTTGCTGAATGACACGACGCTC
TATTCTCAGCTCTGGGATGACATGGGACGATGGGAAGTCAAATCGTTAAAGGATATCTCGGACAAATTTGACAGGCAGCA
GTTCAAAAACTGGCTATACGCTAAAAATAAAGACTCCAAATTGGATCTCGTCTTCAGCGACAACATTCCGATCGATGTGC
TGCAGCCGCTTTTCAAATGGTCCGCCAATTCTTATGAATACAACTCTTTTGACAGAATCGTTCTTCCTTTCAATGAAGGA
CGGGGCATGAAGAAGATCTATTTTGTATCCTTCAGCAAAGAGACGGTTGTTGAAGCGGTGATTGAATCGGCAAATTACCG
CAACATCCTTTCAGACATTGAAAAAGAAAAGTCGCAGATGCCTCTTTATGAGGATTTTGCAATCAATTCGCGCAGAGATG
TCTTGCTTCCGGTTAATCGGCTGAAGCTGTCTGAAAAAGAGTATTTTACAGAAACGATCAGCCCGACGCGTTTTAAAAAA
GCTTTATTTGATGATCCGCAAACCGTGCGGCAGGAAACCAACTTAAACAGACCGGTATATACGGATGGAACAAGCCTTTT
GGAGATCTACTCGAACAACAGACAGATTAAGTTCCAGCACCGCAACCTGGAACCGAGTACTTCTTATCAAAATGGAGAGC
TGATCAATAAAAGCTTCAAATATTTAAACGACACGGGAAGCTGGACGGATGATTATCAATTTTTCGGTTTGAATGAAAAT
CAGCAGATCAACTTTAATCTGTTTATGGATCAGCTGCCGGTCGTTAACAGCCAAAACCAGCCTTTCGGAACGACATCGAT
TGAACTTCGCTGGGCAAACAACGACATATTGGACTATAAACACCCGACATATGTCTTGGGCGCAAACGCAAATCCGGTCA
GCAAAAAGGATAAAGAAATCATGAGCGGAGAAGAATTGATTCAGTTCCTGCAAGACAATGAAGAGTATGACTTTGATAAG
ATTGAGCAAATTTTCCCCGCCTATGAAATGGTCTCAGTATCAGAGGAACAAGACCCTCTTGTCAAACTTGTGCCGACATG
GTGCATTAAAATAAACGGTACGGTAAAGCCGGTATCAAAGAAGGATTCAGCGGTGAAGGAGGGCATAGAAAATGGAGTGG
AATAG

Upstream 100 bases:

>100_bases
CAAGCCCATAGCGGCGACATCTGGGCCGACAGCATCGAAGGAAAAGGAACAACGATCACATTTACCCTGCCGTATAAAGA
AGAACAAGAGGATGATTGGG

Downstream 100 bases:

>100_bases
AACAAAAACAATCTTCATTATCGTCTTCCTCATCCTTGATATCTTTTTGGCCTTTCAATACTTTAATAAGCGCAGCAACA
ATCAGTTTCCGATTTTAGAA

Product: YycH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MKRETIKTIILSLLVLISLLFTFNIWGFQGNYEKVEDSQAQVSDKQPITNQTKLLNEAVKPQQMFIHENGQHYLLNDTTL
YSQLWDDMGRWEVKSLKDISDKFDRQQFKNWLYAKNKDSKLDLVFSDNIPIDVLQPLFKWSANSYEYNSFDRIVLPFNEG
RGMKKIYFVSFSKETVVEAVIESANYRNILSDIEKEKSQMPLYEDFAINSRRDVLLPVNRLKLSEKEYFTETISPTRFKK
ALFDDPQTVRQETNLNRPVYTDGTSLLEIYSNNRQIKFQHRNLEPSTSYQNGELINKSFKYLNDTGSWTDDYQFFGLNEN
QQINFNLFMDQLPVVNSQNQPFGTTSIELRWANNDILDYKHPTYVLGANANPVSKKDKEIMSGEELIQFLQDNEEYDFDK
IEQIFPAYEMVSVSEEQDPLVKLVPTWCIKINGTVKPVSKKDSAVKEGIENGVE

Sequences:

>Translated_454_residues
MKRETIKTIILSLLVLISLLFTFNIWGFQGNYEKVEDSQAQVSDKQPITNQTKLLNEAVKPQQMFIHENGQHYLLNDTTL
YSQLWDDMGRWEVKSLKDISDKFDRQQFKNWLYAKNKDSKLDLVFSDNIPIDVLQPLFKWSANSYEYNSFDRIVLPFNEG
RGMKKIYFVSFSKETVVEAVIESANYRNILSDIEKEKSQMPLYEDFAINSRRDVLLPVNRLKLSEKEYFTETISPTRFKK
ALFDDPQTVRQETNLNRPVYTDGTSLLEIYSNNRQIKFQHRNLEPSTSYQNGELINKSFKYLNDTGSWTDDYQFFGLNEN
QQINFNLFMDQLPVVNSQNQPFGTTSIELRWANNDILDYKHPTYVLGANANPVSKKDKEIMSGEELIQFLQDNEEYDFDK
IEQIFPAYEMVSVSEEQDPLVKLVPTWCIKINGTVKPVSKKDSAVKEGIENGVE
>Mature_454_residues
MKRETIKTIILSLLVLISLLFTFNIWGFQGNYEKVEDSQAQVSDKQPITNQTKLLNEAVKPQQMFIHENGQHYLLNDTTL
YSQLWDDMGRWEVKSLKDISDKFDRQQFKNWLYAKNKDSKLDLVFSDNIPIDVLQPLFKWSANSYEYNSFDRIVLPFNEG
RGMKKIYFVSFSKETVVEAVIESANYRNILSDIEKEKSQMPLYEDFAINSRRDVLLPVNRLKLSEKEYFTETISPTRFKK
ALFDDPQTVRQETNLNRPVYTDGTSLLEIYSNNRQIKFQHRNLEPSTSYQNGELINKSFKYLNDTGSWTDDYQFFGLNEN
QQINFNLFMDQLPVVNSQNQPFGTTSIELRWANNDILDYKHPTYVLGANANPVSKKDKEIMSGEELIQFLQDNEEYDFDK
IEQIFPAYEMVSVSEEQDPLVKLVPTWCIKINGTVKPVSKKDSAVKEGIENGVE

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 53009; Mature: 53009

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRETIKTIILSLLVLISLLFTFNIWGFQGNYEKVEDSQAQVSDKQPITNQTKLLNEAVK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCCCCCCHHHHHHHHHCC
PQQMFIHENGQHYLLNDTTLYSQLWDDMGRWEVKSLKDISDKFDRQQFKNWLYAKNKDSK
CCEEEEEECCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCE
LDLVFSDNIPIDVLQPLFKWSANSYEYNSFDRIVLPFNEGRGMKKIYFVSFSKETVVEAV
EEEEEECCCCHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCEEEEEEEECHHHHHHHH
IESANYRNILSDIEKEKSQMPLYEDFAINSRRDVLLPVNRLKLSEKEYFTETISPTRFKK
HHCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEHHHHHCCHHHHHHHCCCHHHHHH
ALFDDPQTVRQETNLNRPVYTDGTSLLEIYSNNRQIKFQHRNLEPSTSYQNGELINKSFK
HHCCCHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHH
YLNDTGSWTDDYQFFGLNENQQINFNLFMDQLPVVNSQNQPFGTTSIELRWANNDILDYK
HHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEECCC
HPTYVLGANANPVSKKDKEIMSGEELIQFLQDNEEYDFDKIEQIFPAYEMVSVSEEQDPL
CCCEEEECCCCCCCCHHHHHHCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCCCCCCCC
VKLVPTWCIKINGTVKPVSKKDSAVKEGIENGVE
EEEEEEEEEEECCEECCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKRETIKTIILSLLVLISLLFTFNIWGFQGNYEKVEDSQAQVSDKQPITNQTKLLNEAVK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCCCCCCHHHHHHHHHCC
PQQMFIHENGQHYLLNDTTLYSQLWDDMGRWEVKSLKDISDKFDRQQFKNWLYAKNKDSK
CCEEEEEECCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCE
LDLVFSDNIPIDVLQPLFKWSANSYEYNSFDRIVLPFNEGRGMKKIYFVSFSKETVVEAV
EEEEEECCCCHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCEEEEEEEECHHHHHHHH
IESANYRNILSDIEKEKSQMPLYEDFAINSRRDVLLPVNRLKLSEKEYFTETISPTRFKK
HHCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEHHHHHCCHHHHHHHCCCHHHHHH
ALFDDPQTVRQETNLNRPVYTDGTSLLEIYSNNRQIKFQHRNLEPSTSYQNGELINKSFK
HHCCCHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHH
YLNDTGSWTDDYQFFGLNENQQINFNLFMDQLPVVNSQNQPFGTTSIELRWANNDILDYK
HHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEECCC
HPTYVLGANANPVSKKDKEIMSGEELIQFLQDNEEYDFDKIEQIFPAYEMVSVSEEQDPL
CCCEEEECCCCCCCCHHHHHHCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCCCCCCCC
VKLVPTWCIKINGTVKPVSKKDSAVKEGIENGVE
EEEEEEEEEEECCEECCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]