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The map label for this gene is yvfM [H]

Identifier: 52787955

GI number: 52787955

Start: 4122230

End: 4123069

Strand: Reverse

Name: yvfM [H]

Synonym: BLi04278

Alternate gene names: 52787955

Gene position: 4123069-4122230 (Counterclockwise)

Preceding gene: 52787956

Following gene: 52787954

Centisome position: 97.64

GC content: 45.95

Gene sequence:

>840_bases
ATGAAGAAAAGAAGATTCTTTCGGCTCCTTCTGACCTATTCTCTGTTGGCTTTTATGACAGCCGTTATCATATACCCTCT
GCTTTGGACGGTGGGGGTCAGCTTTAATCCCGGCAACAGTTTGGTCAGCACTTCTATCATTCCGGCAAATCCGACATTGG
ATCACTATAAAGAATTATTCGCCGGCAAAGAGAGCCTCCAATACGGGCAATGGTATATAAACTCGCTGAAAATCAGCATC
TTTACGATGATCGGATCGGTCATCAGCGTTTCTTTTACAGCTTATGCTTTTTCACGGTTTCGTTTTAAAGGAAGGAAAAA
CGCTTTAGTTTTATTCTTGCTGCTGCAAATGATTCCTCAATTTTCGGCTTTGGTTGCGCTCTTCGTTTTAGCGCAGATGC
TTGGAATGATGAACAGCCATTGGCTGCTGATTTTGCTGTACATCGGCGGGCTCATACCGATGAACACGTATTTGATGAAA
GGGTATATGGACTCCATTCCCATCGATTTGGATGAGAGCGCTAAGATTGACGGCGCAAGCAATACAAGGATTTTCCTGCA
GATTATTATGCCGCTATCCAAACCGATGATCGCGGTCGTTGCCATGAACGGATTCACCGGGCCGCTCGGGGATTTCGTTT
TGTCTTCGACGATATTGCGGACACCGGAGTCGTATACATTGCCGATCGGTTTATACAATTTAGTCAATGAGGTGATGGGA
GCCAGCTATACGACGTTTGCCGCCGGCGCTATTTTGATCAGCATACCGGTAGCCGTCATCTTTATCATGCTGCAAAAGAA
CTTTGTGTCAGGATTGACGGCAGGCGGAACGAAAGGATAG

Upstream 100 bases:

>100_bases
TTTAGCCGCCGCATTGACGATCCTGCTGTCGGTCTTTGTCATCTCAATTGCACTGTGGCAGTTCAGACGGACAAATTCTT
TCAAAGAGGGGGCTTAACGT

Downstream 100 bases:

>100_bases
TCCGAAGGAGAAAATGGTCTAAAAAAGGAGAGTATTATGCCAAAAATTTATACGACCCAAGCAAGATACATGCTTCACGG
GGGAGACTACAATCCGGATC

Product: YvfM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKKRRFFRLLLTYSLLAFMTAVIIYPLLWTVGVSFNPGNSLVSTSIIPANPTLDHYKELFAGKESLQYGQWYINSLKISI
FTMIGSVISVSFTAYAFSRFRFKGRKNALVLFLLLQMIPQFSALVALFVLAQMLGMMNSHWLLILLYIGGLIPMNTYLMK
GYMDSIPIDLDESAKIDGASNTRIFLQIIMPLSKPMIAVVAMNGFTGPLGDFVLSSTILRTPESYTLPIGLYNLVNEVMG
ASYTTFAAGAILISIPVAVIFIMLQKNFVSGLTAGGTKG

Sequences:

>Translated_279_residues
MKKRRFFRLLLTYSLLAFMTAVIIYPLLWTVGVSFNPGNSLVSTSIIPANPTLDHYKELFAGKESLQYGQWYINSLKISI
FTMIGSVISVSFTAYAFSRFRFKGRKNALVLFLLLQMIPQFSALVALFVLAQMLGMMNSHWLLILLYIGGLIPMNTYLMK
GYMDSIPIDLDESAKIDGASNTRIFLQIIMPLSKPMIAVVAMNGFTGPLGDFVLSSTILRTPESYTLPIGLYNLVNEVMG
ASYTTFAAGAILISIPVAVIFIMLQKNFVSGLTAGGTKG
>Mature_279_residues
MKKRRFFRLLLTYSLLAFMTAVIIYPLLWTVGVSFNPGNSLVSTSIIPANPTLDHYKELFAGKESLQYGQWYINSLKISI
FTMIGSVISVSFTAYAFSRFRFKGRKNALVLFLLLQMIPQFSALVALFVLAQMLGMMNSHWLLILLYIGGLIPMNTYLMK
GYMDSIPIDLDESAKIDGASNTRIFLQIIMPLSKPMIAVVAMNGFTGPLGDFVLSSTILRTPESYTLPIGLYNLVNEVMG
ASYTTFAAGAILISIPVAVIFIMLQKNFVSGLTAGGTKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=293, Percent_Identity=34.1296928327645, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1787571, Length=269, Percent_Identity=27.5092936802974, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1787368, Length=209, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789860, Length=284, Percent_Identity=23.2394366197183, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30808; Mature: 30808

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRRFFRLLLTYSLLAFMTAVIIYPLLWTVGVSFNPGNSLVSTSIIPANPTLDHYKELF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHH
AGKESLQYGQWYINSLKISIFTMIGSVISVSFTAYAFSRFRFKGRKNALVLFLLLQMIPQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FSALVALFVLAQMLGMMNSHWLLILLYIGGLIPMNTYLMKGYMDSIPIDLDESAKIDGAS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NTRIFLQIIMPLSKPMIAVVAMNGFTGPLGDFVLSSTILRTPESYTLPIGLYNLVNEVMG
CCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHC
ASYTTFAAGAILISIPVAVIFIMLQKNFVSGLTAGGTKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKRRFFRLLLTYSLLAFMTAVIIYPLLWTVGVSFNPGNSLVSTSIIPANPTLDHYKELF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHH
AGKESLQYGQWYINSLKISIFTMIGSVISVSFTAYAFSRFRFKGRKNALVLFLLLQMIPQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FSALVALFVLAQMLGMMNSHWLLILLYIGGLIPMNTYLMKGYMDSIPIDLDESAKIDGAS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NTRIFLQIIMPLSKPMIAVVAMNGFTGPLGDFVLSSTILRTPESYTLPIGLYNLVNEVMG
CCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHC
ASYTTFAAGAILISIPVAVIFIMLQKNFVSGLTAGGTKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]