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The map label for this gene is yoaH [H]

Identifier: 52787950

GI number: 52787950

Start: 4113892

End: 4115577

Strand: Reverse

Name: yoaH [H]

Synonym: BLi04273

Alternate gene names: 52787950

Gene position: 4115577-4113892 (Counterclockwise)

Preceding gene: 52787951

Following gene: 52787948

Centisome position: 97.46

GC content: 46.03

Gene sequence:

>1686_bases
ATGAAAGTGAAAACAAAACTGCTGGGAATCATATCAATTCTAGTCGTTTCAATCCTCGGAATCGGAATCTCCTCTGTTTT
TATGATTTCTTCTACGGTGAAAAAGAATGAAGAACTTAAGGACAAGATGGAATTTCAAAAAGAGATTAAGCATATTCAAT
ACCGTCTGACCGGCTTGTCGAATGACGAGAGAGCCCTTATTATGACCGGAGACGATGAATACAGTGAAGGAATGAAGGAC
AAGGCCGACGATGTTTTAAAGAGTCTTGACCGGGCCGGAAAACTGATCCGGGAAAAATCATACAAAGCGAACGTCGAAGA
AATTAAAGAAAACTTCAAGGCTTATTGGGATTTAAATCAACAAGTCATGCAGACTTACGCTTCAAGCCTTAAAAAAGCGG
AATCGATCCATTTCGGAGAGGAAAGAACATTAAGAAAAGATGTCCTCGATCCGTCTGTCAATCAGCTGGTCGAAAGCCTG
GAACAAGAGGTGGATGATCTGAAAGCAGAGATCAGAGCCAATGGGACGATGAGCGAATGGGTCATCATCGCTGTCACAGG
AGTATCAGCGATATTGGGAATTGTTTTGAGTCTGCTGCTCTTGAAGTCTATTCTGGTACCGTTGAGAAGCCTGAATCAGC
AGCTTGAGGACATCGCCCACGGCGAGGCGGATTTAACGAAAAAAGTGATCGTCAAAAATAAAGACGAGTTCGGCCAGCTT
GCCAATTCTTTCAATGCTTTTGTCCAGTCGCTGACGCAAATTGTGAAGCAGATCAGCAGCTCGTCTGAGCAAGTCGCCGC
ATCCTCTGAACAGTTGTCCGCAAGCGCGGAGGAATCGAAATCGACTTCCGAACTGATTTCCGAAGAGATGCAGGCGATCG
CCGACAGCAACATGACGCAAAGCGAAATGACAGAAAAGAGTTCAGAAGCAATTCATGAATTGCTGGACCGTTTATCATCC
GTTGCCTCCAATACAGGCAGCATAGCGGATCTGTCGTCTTCGATGAGAGACAAAGCCGAAATCGGCTCCGAGTCCGTTCA
TAAAATGCTCGAACAAATGAACTTCATTGATAAGTCAGTCGACTCGGCCGGCAGCGGCCTGCAGGCGCTCGTGTCCAGCA
CGGCGGAAATCAGCAACATTTCTTCGCTCATCACCGATATTTCGGAGCAGACGAATTTGCTGGCGCTGAACGCGGCAATT
GAAGCAGCAAGAGCGGGAGAGCAAGGAAAAGGGTTTGCCGTCGTGGCGGAAGAGGTCCGGAAATTGGCGGACGAAACGAA
TAAGTCAGCGAGCCACATTCAATCATTGGTCACAACGATCCAAAATGAATCGGTAGAAACGGTAAATAATATTAAAGTCG
TTCAAGAAAATGTCAGCTCCGGTATAGCTTTGTCGCAGGAGACGACCGGTAATTTCAACGAAATTTTAAACTTGGTGGAA
CAGGTTGCTTCTCAAATCCAAGAAGTCGCGGCTTCTACTCAGCAGCTGACATCAGGTGTCGAAATGGTTCAAAACACCAT
TCAAACATTGGCTTCCGGATCACAGGAAACGTCAGCCAGCACAAAAGCGGTTGCTTCCTCAACCCAGGAGCAGCTGGCTT
CAATGGAAGAAATCTCATATGCAGCGGAATCGCTGTCCCAATTGGCTGAAGAACTTCAAACCATTATCAATCGATTTAAA
TATTAA

Upstream 100 bases:

>100_bases
AAATTTTGACGAAATATGTCGATACTATGGAGGGAAGAAGATGTTTGATTTGAAAACTGTTTTTCATCATTGATGACATA
AAGGAGAAAGGATCACCATA

Downstream 100 bases:

>100_bases
GCAGAAAACCCCATCCGGCGATGGGGTTTTAATTGGTTTTCATGGCAGCCAAAGCGCCCTCGGGGATTTCTTCTTCGTGT
ACTTCAGTCAAGCTTTTGGC

Product: YoaH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MKVKTKLLGIISILVVSILGIGISSVFMISSTVKKNEELKDKMEFQKEIKHIQYRLTGLSNDERALIMTGDDEYSEGMKD
KADDVLKSLDRAGKLIREKSYKANVEEIKENFKAYWDLNQQVMQTYASSLKKAESIHFGEERTLRKDVLDPSVNQLVESL
EQEVDDLKAEIRANGTMSEWVIIAVTGVSAILGIVLSLLLLKSILVPLRSLNQQLEDIAHGEADLTKKVIVKNKDEFGQL
ANSFNAFVQSLTQIVKQISSSSEQVAASSEQLSASAEESKSTSELISEEMQAIADSNMTQSEMTEKSSEAIHELLDRLSS
VASNTGSIADLSSSMRDKAEIGSESVHKMLEQMNFIDKSVDSAGSGLQALVSSTAEISNISSLITDISEQTNLLALNAAI
EAARAGEQGKGFAVVAEEVRKLADETNKSASHIQSLVTTIQNESVETVNNIKVVQENVSSGIALSQETTGNFNEILNLVE
QVASQIQEVAASTQQLTSGVEMVQNTIQTLASGSQETSASTKAVASSTQEQLASMEEISYAAESLSQLAEELQTIINRFK
Y

Sequences:

>Translated_561_residues
MKVKTKLLGIISILVVSILGIGISSVFMISSTVKKNEELKDKMEFQKEIKHIQYRLTGLSNDERALIMTGDDEYSEGMKD
KADDVLKSLDRAGKLIREKSYKANVEEIKENFKAYWDLNQQVMQTYASSLKKAESIHFGEERTLRKDVLDPSVNQLVESL
EQEVDDLKAEIRANGTMSEWVIIAVTGVSAILGIVLSLLLLKSILVPLRSLNQQLEDIAHGEADLTKKVIVKNKDEFGQL
ANSFNAFVQSLTQIVKQISSSSEQVAASSEQLSASAEESKSTSELISEEMQAIADSNMTQSEMTEKSSEAIHELLDRLSS
VASNTGSIADLSSSMRDKAEIGSESVHKMLEQMNFIDKSVDSAGSGLQALVSSTAEISNISSLITDISEQTNLLALNAAI
EAARAGEQGKGFAVVAEEVRKLADETNKSASHIQSLVTTIQNESVETVNNIKVVQENVSSGIALSQETTGNFNEILNLVE
QVASQIQEVAASTQQLTSGVEMVQNTIQTLASGSQETSASTKAVASSTQEQLASMEEISYAAESLSQLAEELQTIINRFK
Y
>Mature_561_residues
MKVKTKLLGIISILVVSILGIGISSVFMISSTVKKNEELKDKMEFQKEIKHIQYRLTGLSNDERALIMTGDDEYSEGMKD
KADDVLKSLDRAGKLIREKSYKANVEEIKENFKAYWDLNQQVMQTYASSLKKAESIHFGEERTLRKDVLDPSVNQLVESL
EQEVDDLKAEIRANGTMSEWVIIAVTGVSAILGIVLSLLLLKSILVPLRSLNQQLEDIAHGEADLTKKVIVKNKDEFGQL
ANSFNAFVQSLTQIVKQISSSSEQVAASSEQLSASAEESKSTSELISEEMQAIADSNMTQSEMTEKSSEAIHELLDRLSS
VASNTGSIADLSSSMRDKAEIGSESVHKMLEQMNFIDKSVDSAGSGLQALVSSTAEISNISSLITDISEQTNLLALNAAI
EAARAGEQGKGFAVVAEEVRKLADETNKSASHIQSLVTTIQNESVETVNNIKVVQENVSSGIALSQETTGNFNEILNLVE
QVASQIQEVAASTQQLTSGVEMVQNTIQTLASGSQETSASTKAVASSTQEQLASMEEISYAAESLSQLAEELQTIINRFK
Y

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=467, Percent_Identity=27.8372591006424, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788195, Length=302, Percent_Identity=29.8013245033113, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI2367378, Length=326, Percent_Identity=27.3006134969325, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1789453, Length=288, Percent_Identity=30.5555555555556, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1788194, Length=367, Percent_Identity=26.158038147139, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007891
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 61053; Mature: 61053

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKTKLLGIISILVVSILGIGISSVFMISSTVKKNEELKDKMEFQKEIKHIQYRLTGLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDERALIMTGDDEYSEGMKDKADDVLKSLDRAGKLIREKSYKANVEEIKENFKAYWDLNQ
CCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
QVMQTYASSLKKAESIHFGEERTLRKDVLDPSVNQLVESLEQEVDDLKAEIRANGTMSEW
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VIIAVTGVSAILGIVLSLLLLKSILVPLRSLNQQLEDIAHGEADLTKKVIVKNKDEFGQL
HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
ANSFNAFVQSLTQIVKQISSSSEQVAASSEQLSASAEESKSTSELISEEMQAIADSNMTQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SEMTEKSSEAIHELLDRLSSVASNTGSIADLSSSMRDKAEIGSESVHKMLEQMNFIDKSV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DSAGSGLQALVSSTAEISNISSLITDISEQTNLLALNAAIEAARAGEQGKGFAVVAEEVR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
KLADETNKSASHIQSLVTTIQNESVETVNNIKVVQENVSSGIALSQETTGNFNEILNLVE
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHH
QVASQIQEVAASTQQLTSGVEMVQNTIQTLASGSQETSASTKAVASSTQEQLASMEEISY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAESLSQLAEELQTIINRFKY
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVKTKLLGIISILVVSILGIGISSVFMISSTVKKNEELKDKMEFQKEIKHIQYRLTGLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDERALIMTGDDEYSEGMKDKADDVLKSLDRAGKLIREKSYKANVEEIKENFKAYWDLNQ
CCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
QVMQTYASSLKKAESIHFGEERTLRKDVLDPSVNQLVESLEQEVDDLKAEIRANGTMSEW
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VIIAVTGVSAILGIVLSLLLLKSILVPLRSLNQQLEDIAHGEADLTKKVIVKNKDEFGQL
HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
ANSFNAFVQSLTQIVKQISSSSEQVAASSEQLSASAEESKSTSELISEEMQAIADSNMTQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SEMTEKSSEAIHELLDRLSSVASNTGSIADLSSSMRDKAEIGSESVHKMLEQMNFIDKSV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DSAGSGLQALVSSTAEISNISSLITDISEQTNLLALNAAIEAARAGEQGKGFAVVAEEVR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
KLADETNKSASHIQSLVTTIQNESVETVNNIKVVQENVSSGIALSQETTGNFNEILNLVE
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHH
QVASQIQEVAASTQQLTSGVEMVQNTIQTLASGSQETSASTKAVASSTQEQLASMEEISY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAESLSQLAEELQTIINRFKY
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]