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The map label for this gene is yaaJ [C]

Identifier: 52787951

GI number: 52787951

Start: 4115732

End: 4117156

Strand: Reverse

Name: yaaJ [C]

Synonym: BLi04274

Alternate gene names: 52787951

Gene position: 4117156-4115732 (Counterclockwise)

Preceding gene: 52787953

Following gene: 52787950

Centisome position: 97.5

GC content: 50.6

Gene sequence:

>1425_bases
ATGGATATCTTAGAAATACTAGGCAAGATTAATAAGGTACTATGGGGGCCGCCCAGTTTAATTTTATTATTTGGGACAGG
CTTATTTTTAACGATTGTTTTAAAAGGACTGCAATTTCGCCGCCTGATCTATGCGTTTAAGATCGGGTTTGGCAAAGAAG
ACAGCAAAGACGCGGCTGCCGAAGGGGATGTGAGCCATTTTAAGGCTTTGATGACAGCGCTCGCCGCTACGATCGGAAAC
GGAAATATCGCAGGTGTCGCGACGGCATTGACACTCGGCGGACCGGGTTCGATCTTTTGGATGTGGGTTGTCGGGCTGTT
GGGGATGGCAACGAAATACGCGGAAGCCTTGCTGGCTGTTAAATTCCGCGTAAAAAATGAAAAAGGGGAATATTCAAGCG
GGCCGATGTATTATATCGAACACGGACTCGGCCGCAAATTTAAAGGACTCGCCATCGCCTTTGCGCTGTTTGGAGCTTTT
GCCGCTTTGGGGATAGGCAACAGTGTCCAATCCAATACGATCGCTGATATTACGAAGAACAGCTTCGGCATCGAAAACTG
GGTGACAGGGCTGATTCTCGTCATTCTCGTCAGCGTCATTATCTTCGGCGGCATCCAGCGGATCAGCACCGTTGCCAGCT
TCTTTGTGCCGATCATGGCTTTTCTTTACATGGGCGGGGCGATCTTGATTCTGATTTTGAATTATGACAAGATTATTCCG
GCTTTTGCGCTGATTTTTTATTATGCTTTCCACCCTGTAGCGGCAGCCGGCGGCTTCCTTGGAATTGCCGTATCTGAAGC
GGTTCGGAACGGGGTATCCCGCGGTATTTTCTCAAACGAAGCAGGCCTTGGGACGGCGGCGCTAATCGCCGGAAATGCGC
GCGCAGACCATCCGGTAAAACAGGCGCTCGTCGCAATGACCGGGACATTTATCGTGACGATCGTGGTGTGTACAATGACC
GGTTTAACCCTTATCATTACCGGTTTCTGGGACCCGTCCGGCGGCTTGATATCAGGCGTGGCCCATAATGCCAGCCTGGA
AGGCGGGGCATTGACAAGCGCAGCTTTTGCTTCAGTACTCGGCGCGGCAGGCGAATACATTGTGTCTCTGTCGGTCATTT
TCTTTGGCTTCTCTACAATTGTCGGCTGGTATGTTTACGGAGAAAAGTGCTTCGAATATTTGGCAGGCGCCAAAGGAATT
GCGGGCTACAGGCTGGTCTACATCCTCGCCTGCGGCATCGGGACGGTTGCCAACCTCGTCACCGTCTGGGCGTTTGCCGA
TATGGCGAATGCGCTGATGATGATTCCAAACCTGATCGCCATCCTGCTGCTTTGGAAAGTCATCAAAGCAGAGACAAATG
ATTATTTTCACCACTTCTATGAACATACCAAATCGGCGGGCCCGCCAAGTAAACCAATTCATTAA

Upstream 100 bases:

>100_bases
CGATTACATTTTGTGTCGTTTCACAAACATAACCATTTTCCATTGTGATAGAATATCTCATGCAGCTATGAAAGCGTTAT
CTTTGTCAGGAGTGAGTCAT

Downstream 100 bases:

>100_bases
AAGCTCTGCCTTCCCGGCAGAGCTTTTTCTTCGGCTTATATTCTGCACCTTCTCAAATTTTGACGAAATATGTCGATACT
ATGGAGGGAAGAAGATGTTT

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MDILEILGKINKVLWGPPSLILLFGTGLFLTIVLKGLQFRRLIYAFKIGFGKEDSKDAAAEGDVSHFKALMTALAATIGN
GNIAGVATALTLGGPGSIFWMWVVGLLGMATKYAEALLAVKFRVKNEKGEYSSGPMYYIEHGLGRKFKGLAIAFALFGAF
AALGIGNSVQSNTIADITKNSFGIENWVTGLILVILVSVIIFGGIQRISTVASFFVPIMAFLYMGGAILILILNYDKIIP
AFALIFYYAFHPVAAAGGFLGIAVSEAVRNGVSRGIFSNEAGLGTAALIAGNARADHPVKQALVAMTGTFIVTIVVCTMT
GLTLIITGFWDPSGGLISGVAHNASLEGGALTSAAFASVLGAAGEYIVSLSVIFFGFSTIVGWYVYGEKCFEYLAGAKGI
AGYRLVYILACGIGTVANLVTVWAFADMANALMMIPNLIAILLLWKVIKAETNDYFHHFYEHTKSAGPPSKPIH

Sequences:

>Translated_474_residues
MDILEILGKINKVLWGPPSLILLFGTGLFLTIVLKGLQFRRLIYAFKIGFGKEDSKDAAAEGDVSHFKALMTALAATIGN
GNIAGVATALTLGGPGSIFWMWVVGLLGMATKYAEALLAVKFRVKNEKGEYSSGPMYYIEHGLGRKFKGLAIAFALFGAF
AALGIGNSVQSNTIADITKNSFGIENWVTGLILVILVSVIIFGGIQRISTVASFFVPIMAFLYMGGAILILILNYDKIIP
AFALIFYYAFHPVAAAGGFLGIAVSEAVRNGVSRGIFSNEAGLGTAALIAGNARADHPVKQALVAMTGTFIVTIVVCTMT
GLTLIITGFWDPSGGLISGVAHNASLEGGALTSAAFASVLGAAGEYIVSLSVIFFGFSTIVGWYVYGEKCFEYLAGAKGI
AGYRLVYILACGIGTVANLVTVWAFADMANALMMIPNLIAILLLWKVIKAETNDYFHHFYEHTKSAGPPSKPIH
>Mature_474_residues
MDILEILGKINKVLWGPPSLILLFGTGLFLTIVLKGLQFRRLIYAFKIGFGKEDSKDAAAEGDVSHFKALMTALAATIGN
GNIAGVATALTLGGPGSIFWMWVVGLLGMATKYAEALLAVKFRVKNEKGEYSSGPMYYIEHGLGRKFKGLAIAFALFGAF
AALGIGNSVQSNTIADITKNSFGIENWVTGLILVILVSVIIFGGIQRISTVASFFVPIMAFLYMGGAILILILNYDKIIP
AFALIFYYAFHPVAAAGGFLGIAVSEAVRNGVSRGIFSNEAGLGTAALIAGNARADHPVKQALVAMTGTFIVTIVVCTMT
GLTLIITGFWDPSGGLISGVAHNASLEGGALTSAAFASVLGAAGEYIVSLSVIFFGFSTIVGWYVYGEKCFEYLAGAKGI
AGYRLVYILACGIGTVANLVTVWAFADMANALMMIPNLIAILLLWKVIKAETNDYFHHFYEHTKSAGPPSKPIH

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=454, Percent_Identity=36.1233480176211, Blast_Score=237, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 50232; Mature: 50232

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILEILGKINKVLWGPPSLILLFGTGLFLTIVLKGLQFRRLIYAFKIGFGKEDSKDAAA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EGDVSHFKALMTALAATIGNGNIAGVATALTLGGPGSIFWMWVVGLLGMATKYAEALLAV
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
KFRVKNEKGEYSSGPMYYIEHGLGRKFKGLAIAFALFGAFAALGIGNSVQSNTIADITKN
HHEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
SFGIENWVTGLILVILVSVIIFGGIQRISTVASFFVPIMAFLYMGGAILILILNYDKIIP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCHHHHH
AFALIFYYAFHPVAAAGGFLGIAVSEAVRNGVSRGIFSNEAGLGTAALIAGNARADHPVK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCHHH
QALVAMTGTFIVTIVVCTMTGLTLIITGFWDPSGGLISGVAHNASLEGGALTSAAFASVL
HHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
GAAGEYIVSLSVIFFGFSTIVGWYVYGEKCFEYLAGAKGIAGYRLVYILACGIGTVANLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TVWAFADMANALMMIPNLIAILLLWKVIKAETNDYFHHFYEHTKSAGPPSKPIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDILEILGKINKVLWGPPSLILLFGTGLFLTIVLKGLQFRRLIYAFKIGFGKEDSKDAAA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EGDVSHFKALMTALAATIGNGNIAGVATALTLGGPGSIFWMWVVGLLGMATKYAEALLAV
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
KFRVKNEKGEYSSGPMYYIEHGLGRKFKGLAIAFALFGAFAALGIGNSVQSNTIADITKN
HHEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
SFGIENWVTGLILVILVSVIIFGGIQRISTVASFFVPIMAFLYMGGAILILILNYDKIIP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCHHHHH
AFALIFYYAFHPVAAAGGFLGIAVSEAVRNGVSRGIFSNEAGLGTAALIAGNARADHPVK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCHHH
QALVAMTGTFIVTIVVCTMTGLTLIITGFWDPSGGLISGVAHNASLEGGALTSAAFASVL
HHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
GAAGEYIVSLSVIFFGFSTIVGWYVYGEKCFEYLAGAKGIAGYRLVYILACGIGTVANLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TVWAFADMANALMMIPNLIAILLLWKVIKAETNDYFHHFYEHTKSAGPPSKPIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]