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The map label for this gene is nrdD [H]

Identifier: 52787504

GI number: 52787504

Start: 3649977

End: 3651845

Strand: Reverse

Name: nrdD [H]

Synonym: BLi03824

Alternate gene names: 52787504

Gene position: 3651845-3649977 (Counterclockwise)

Preceding gene: 52787505

Following gene: 52787503

Centisome position: 86.48

GC content: 46.82

Gene sequence:

>1869_bases
ATGACAACAGGCTTTAAAGAACAGGGATTATTGCAATTGACAGAAACATTTCATGATATCGTCGGGTATGGAAATCACGA
TATTATGCAGGAAAATGCCAACGTAGACGGCCGCTCCCCGATGGGGCAAATGAGCCGGTTTGCATCCGAGAGTTCCAGAC
ATTATGCGCTCCATTACTTAATGTCGCCGGAAATCAAGAAAGCAGTCGATGACAACTTTATATACCCTCACGATTTAGAC
TATATGCCGAGCGGGACAACGACTTGCTGTCAGATACCATTGGTCCGGCTGTTAAAGGAGGGATTCCACACTGGCCACGG
CTCCCTCAGGGAACCGAAGGACATTATGAGCGCATTGTCACTCGCATCTATCATTTTTCAATCGAATCAAAATATGCAGC
ATGGCGGCCAGTCATTCCCAATGTTCGATTACGATCTGGCGCCTTACGTCCGCAAAACGTACGAAAAGCATCTTGCGAAA
ATCAAACAATACCCGACAACTTTGACAGAAGAAGAGATAAGGGAAAGAGCGTGGGAAGAAACGGACAACACAACTTACCA
AGCGTGCGAAGCATTTATACATAACGCCAACAGCATGCATTCGAGGGGCGGCGGACAGGTGCCGTTTGTTTCCATTAATT
ACGGCACGGATACGTCAAGGGAAGGCCGCCTTTTGATCAAAAATATTCTTAAGGCGACAAAAGCAGGCCTCGGCAAAGGT
GAGACGCCGATTTTTCCGATTCAGATCTTCAAAATGAAAGAAGGCGTGAACGTTGATCAAACAGACCCTAACTATGACTT
GTACCGGCTTGCATTGGAAACGAGCGCTGAAAGGCTGTTTCCGAACTTCAGCTTTATCGACTCGCCCGTGAACAAACCTT
TTTATGACGGAACGCCGGAAAGCGAAATCGCTTATATGGGATGCAGAACGCGCGTCATGTCCAATATTCATGGAAAAGAA
AACAGCGTCGGCAGAGGGAATTTGTCATTCACCTCGATCAACATTGTGAAAATAGCGCTGCTCAGCGAAAACGTTGAACA
GTTTTTTGCCTTGTTAAACCGCTACATGGATTTAACGATTCAACAGCTGCTTGAACGGTACGCCTTTCAATGCAAGAAAA
GAGCAAAGGACTTTAAATTCCTGTATTCACAAGGCATCTGGCATGAAAGCGAGAAGCTTGAACCTGAGGACACGCTCGAG
GATGTGCTAAAGCACGGAACATTGAGCATCGGATTTATCGGGCTGGCTGAAGCTTTGACTGCATTGACCGGAAAACATCA
CGGAGAAAGCGAGGAGTCGTTTGAACTCGGCAAAAAAATCGTCCAGTCGATGAGAGATAAGGCCGATGAAGCCACAGAAA
AACACAAATTGAACTTTTCCTTGATCGCTACGCCGGCAGAAGGGCTTTCAGGGAAATTTGTCAAAAAAGACAAAGTGGAG
TTCGGTTCGATCCGCAATGTCACAGACCGGGTGTACTATACGAATTCGTTTCACATCCCTGTTCACTATAAGCTGACTGC
GGTCGAAAAGATCAGAAAAGAAGCGCCGTTCCACTTAATGTGCAATGGAGGGCACATCAGCTACATCGAGCTGGACGGAG
ACCCGAAAAAAAACATTAAAGCGATGGACATGCTTGTGACCGCCATGCGCCGGTCAGGCATGGGCTACGCCTCGATCAAC
CATCCTGTCGACCACTGCAAGGCGTGCGGATTTACCGGAATCATAGATAATGAATGCCCGCAGTGCAAAAACCGGGATGA
GGCTTTGATCGAACGAATCAGACGGATTACAGGATATTTAGTCGGAGATATGTCAAAGTGGAATTCGGCGAAAAGACAAG
AAGAAAAGGACAGAGTGAAGCATCTATGA

Upstream 100 bases:

>100_bases
AAATTGCTAAATTTGACGAACATAATCTGTGCTAATATCAATATATAGTGTCTGTTGGATGAACAAACACTATATATGCT
ACTTTTTAGGAGAGATTAGG

Downstream 100 bases:

>100_bases
AAGTGATGAATATTATCCATGACAGCATCGTAGACGGAGAAGGACTGAGAACAGTCGTGTTTTTAGCGGGCTGCCCGCAT
ATGTGTGAAGGCTGCCATAA

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MTTGFKEQGLLQLTETFHDIVGYGNHDIMQENANVDGRSPMGQMSRFASESSRHYALHYLMSPEIKKAVDDNFIYPHDLD
YMPSGTTTCCQIPLVRLLKEGFHTGHGSLREPKDIMSALSLASIIFQSNQNMQHGGQSFPMFDYDLAPYVRKTYEKHLAK
IKQYPTTLTEEEIRERAWEETDNTTYQACEAFIHNANSMHSRGGGQVPFVSINYGTDTSREGRLLIKNILKATKAGLGKG
ETPIFPIQIFKMKEGVNVDQTDPNYDLYRLALETSAERLFPNFSFIDSPVNKPFYDGTPESEIAYMGCRTRVMSNIHGKE
NSVGRGNLSFTSINIVKIALLSENVEQFFALLNRYMDLTIQQLLERYAFQCKKRAKDFKFLYSQGIWHESEKLEPEDTLE
DVLKHGTLSIGFIGLAEALTALTGKHHGESEESFELGKKIVQSMRDKADEATEKHKLNFSLIATPAEGLSGKFVKKDKVE
FGSIRNVTDRVYYTNSFHIPVHYKLTAVEKIRKEAPFHLMCNGGHISYIELDGDPKKNIKAMDMLVTAMRRSGMGYASIN
HPVDHCKACGFTGIIDNECPQCKNRDEALIERIRRITGYLVGDMSKWNSAKRQEEKDRVKHL

Sequences:

>Translated_622_residues
MTTGFKEQGLLQLTETFHDIVGYGNHDIMQENANVDGRSPMGQMSRFASESSRHYALHYLMSPEIKKAVDDNFIYPHDLD
YMPSGTTTCCQIPLVRLLKEGFHTGHGSLREPKDIMSALSLASIIFQSNQNMQHGGQSFPMFDYDLAPYVRKTYEKHLAK
IKQYPTTLTEEEIRERAWEETDNTTYQACEAFIHNANSMHSRGGGQVPFVSINYGTDTSREGRLLIKNILKATKAGLGKG
ETPIFPIQIFKMKEGVNVDQTDPNYDLYRLALETSAERLFPNFSFIDSPVNKPFYDGTPESEIAYMGCRTRVMSNIHGKE
NSVGRGNLSFTSINIVKIALLSENVEQFFALLNRYMDLTIQQLLERYAFQCKKRAKDFKFLYSQGIWHESEKLEPEDTLE
DVLKHGTLSIGFIGLAEALTALTGKHHGESEESFELGKKIVQSMRDKADEATEKHKLNFSLIATPAEGLSGKFVKKDKVE
FGSIRNVTDRVYYTNSFHIPVHYKLTAVEKIRKEAPFHLMCNGGHISYIELDGDPKKNIKAMDMLVTAMRRSGMGYASIN
HPVDHCKACGFTGIIDNECPQCKNRDEALIERIRRITGYLVGDMSKWNSAKRQEEKDRVKHL
>Mature_621_residues
TTGFKEQGLLQLTETFHDIVGYGNHDIMQENANVDGRSPMGQMSRFASESSRHYALHYLMSPEIKKAVDDNFIYPHDLDY
MPSGTTTCCQIPLVRLLKEGFHTGHGSLREPKDIMSALSLASIIFQSNQNMQHGGQSFPMFDYDLAPYVRKTYEKHLAKI
KQYPTTLTEEEIRERAWEETDNTTYQACEAFIHNANSMHSRGGGQVPFVSINYGTDTSREGRLLIKNILKATKAGLGKGE
TPIFPIQIFKMKEGVNVDQTDPNYDLYRLALETSAERLFPNFSFIDSPVNKPFYDGTPESEIAYMGCRTRVMSNIHGKEN
SVGRGNLSFTSINIVKIALLSENVEQFFALLNRYMDLTIQQLLERYAFQCKKRAKDFKFLYSQGIWHESEKLEPEDTLED
VLKHGTLSIGFIGLAEALTALTGKHHGESEESFELGKKIVQSMRDKADEATEKHKLNFSLIATPAEGLSGKFVKKDKVEF
GSIRNVTDRVYYTNSFHIPVHYKLTAVEKIRKEAPFHLMCNGGHISYIELDGDPKKNIKAMDMLVTAMRRSGMGYASINH
PVDHCKACGFTGIIDNECPQCKNRDEALIERIRRITGYLVGDMSKWNSAKRQEEKDRVKHL

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=625, Percent_Identity=33.12, Blast_Score=315, Evalue=4e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 70605; Mature: 70474

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGFKEQGLLQLTETFHDIVGYGNHDIMQENANVDGRSPMGQMSRFASESSRHYALHYL
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
MSPEIKKAVDDNFIYPHDLDYMPSGTTTCCQIPLVRLLKEGFHTGHGSLREPKDIMSALS
CCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LASIIFQSNQNMQHGGQSFPMFDYDLAPYVRKTYEKHLAKIKQYPTTLTEEEIRERAWEE
HHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
TDNTTYQACEAFIHNANSMHSRGGGQVPFVSINYGTDTSREGRLLIKNILKATKAGLGKG
CCCHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
ETPIFPIQIFKMKEGVNVDQTDPNYDLYRLALETSAERLFPNFSFIDSPVNKPFYDGTPE
CCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC
SEIAYMGCRTRVMSNIHGKENSVGRGNLSFTSINIVKIALLSENVEQFFALLNRYMDLTI
CCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
QQLLERYAFQCKKRAKDFKFLYSQGIWHESEKLEPEDTLEDVLKHGTLSIGFIGLAEALT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHH
ALTGKHHGESEESFELGKKIVQSMRDKADEATEKHKLNFSLIATPAEGLSGKFVKKDKVE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
FGSIRNVTDRVYYTNSFHIPVHYKLTAVEKIRKEAPFHLMCNGGHISYIELDGDPKKNIK
CCCCCCCCCEEEEECEEEEEEEEEHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCHH
AMDMLVTAMRRSGMGYASINHPVDHCKACGFTGIIDNECPQCKNRDEALIERIRRITGYL
HHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VGDMSKWNSAKRQEEKDRVKHL
HCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTGFKEQGLLQLTETFHDIVGYGNHDIMQENANVDGRSPMGQMSRFASESSRHYALHYL
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
MSPEIKKAVDDNFIYPHDLDYMPSGTTTCCQIPLVRLLKEGFHTGHGSLREPKDIMSALS
CCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LASIIFQSNQNMQHGGQSFPMFDYDLAPYVRKTYEKHLAKIKQYPTTLTEEEIRERAWEE
HHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
TDNTTYQACEAFIHNANSMHSRGGGQVPFVSINYGTDTSREGRLLIKNILKATKAGLGKG
CCCHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
ETPIFPIQIFKMKEGVNVDQTDPNYDLYRLALETSAERLFPNFSFIDSPVNKPFYDGTPE
CCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC
SEIAYMGCRTRVMSNIHGKENSVGRGNLSFTSINIVKIALLSENVEQFFALLNRYMDLTI
CCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
QQLLERYAFQCKKRAKDFKFLYSQGIWHESEKLEPEDTLEDVLKHGTLSIGFIGLAEALT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHH
ALTGKHHGESEESFELGKKIVQSMRDKADEATEKHKLNFSLIATPAEGLSGKFVKKDKVE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
FGSIRNVTDRVYYTNSFHIPVHYKLTAVEKIRKEAPFHLMCNGGHISYIELDGDPKKNIK
CCCCCCCCCEEEEECEEEEEEEEEHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCHH
AMDMLVTAMRRSGMGYASINHPVDHCKACGFTGIIDNECPQCKNRDEALIERIRRITGYL
HHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VGDMSKWNSAKRQEEKDRVKHL
HCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]