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The map label for this gene is yviA [H]

Identifier: 52787472

GI number: 52787472

Start: 3609702

End: 3610544

Strand: Reverse

Name: yviA [H]

Synonym: BLi03792

Alternate gene names: 52787472

Gene position: 3610544-3609702 (Counterclockwise)

Preceding gene: 52787473

Following gene: 52787471

Centisome position: 85.5

GC content: 46.26

Gene sequence:

>843_bases
ATGAAAACAGCAGTAGTAACAGACAGTACGGCATATATACCTAAAGACCTGCGTGACCGCTACAATATTCATATGATACC
TCTCAATGTGATCTTTGGAGAGACTTCATACAGGGAAGAGATCGATATGAGCTGGAAGGACTATTACAAAGAAGTAAAAG
CCCACGAAAATCTCCCGACGACTTCCCAGCCCGCCTACGGCGAGTTGATTTCTCTCTATGAAAAACTCGGTGAAACATAT
GACGCGGTCATCAGCATCCACCTTTCCAGCGGCATCAGCGGAACATTCAACAGCGCTGTATCAGCAAGCGGTATGCTTGA
AGGAATTAAAGTGTATCCGTTTGATTCGGAAATCAGCTGCATGGCTCAGGGTTTTTATGCGATCGAGGCGGCTGAGATGG
CGGAAAAAGGAGCGGCTCCTGAGGAAATCATCCGCCACTTGGATCATATGAAAACCTCGATGAGGGCTTATTTTATGGTT
GACGACCTTTCACATTTGCAAAGGGGAGGACGTCTGAGCGGCGCCCAGGCTTTTGTCGGAAGCCTTTTAAAAGTAAAGCC
GATCTTGCATTTTGAGAACAAGCTGATCGTTCCCTACGAGAAAATCCGGACGAGAAAAAAAGCGATGAACCGTTTATTTG
AGCTTTTTGGCGAAGATGCCGAGAAAGGAAAGCCGCTGAGAGCGGTTGTGATTCATGCCAACCGTGAAGAAGAAGCCGAT
CAAATAATCGAAGAATTGTCGAAGCAATATGCACATGTCGAATTTTATAAAAGCTATTTCGGGCCTGTGATCGGCACTCA
CCTTGGTGAAGGAGCGATGGGTATCGCCTGGTATACAGTATAA

Upstream 100 bases:

>100_bases
CAGGTCTTTTCTTTTGGCAGAAAATTAAACTTTATAATGAAAAAAGCTGCTTTTTCTTTTAGAATAGAAAAGAGTATCTT
TCATAAGGAAGGTTTATTTC

Downstream 100 bases:

>100_bases
AAGCCAATCTCCGTTTTGCAAAACGGAGATTTTTTTTTCAACTGTTTTGAAGGGAGATTTTTAGATTTTGACTGTTTTAC
AAGAAACCATGGATGATAGA

Product: YviA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYKEVKAHENLPTTSQPAYGELISLYEKLGETY
DAVISIHLSSGISGTFNSAVSASGMLEGIKVYPFDSEISCMAQGFYAIEAAEMAEKGAAPEEIIRHLDHMKTSMRAYFMV
DDLSHLQRGGRLSGAQAFVGSLLKVKPILHFENKLIVPYEKIRTRKKAMNRLFELFGEDAEKGKPLRAVVIHANREEEAD
QIIEELSKQYAHVEFYKSYFGPVIGTHLGEGAMGIAWYTV

Sequences:

>Translated_280_residues
MKTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYKEVKAHENLPTTSQPAYGELISLYEKLGETY
DAVISIHLSSGISGTFNSAVSASGMLEGIKVYPFDSEISCMAQGFYAIEAAEMAEKGAAPEEIIRHLDHMKTSMRAYFMV
DDLSHLQRGGRLSGAQAFVGSLLKVKPILHFENKLIVPYEKIRTRKKAMNRLFELFGEDAEKGKPLRAVVIHANREEEAD
QIIEELSKQYAHVEFYKSYFGPVIGTHLGEGAMGIAWYTV
>Mature_280_residues
MKTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYKEVKAHENLPTTSQPAYGELISLYEKLGETY
DAVISIHLSSGISGTFNSAVSASGMLEGIKVYPFDSEISCMAQGFYAIEAAEMAEKGAAPEEIIRHLDHMKTSMRAYFMV
DDLSHLQRGGRLSGAQAFVGSLLKVKPILHFENKLIVPYEKIRTRKKAMNRLFELFGEDAEKGKPLRAVVIHANREEEAD
QIIEELSKQYAHVEFYKSYFGPVIGTHLGEGAMGIAWYTV

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31578; Mature: 31578

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYKEVKAHENLPT
CCCEEECCCCCCCCHHHHCCCCEEEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCC
TSQPAYGELISLYEKLGETYDAVISIHLSSGISGTFNSAVSASGMLEGIKVYPFDSEISC
CCCCHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCHHHH
MAQGFYAIEAAEMAEKGAAPEEIIRHLDHMKTSMRAYFMVDDLSHLQRGGRLSGAQAFVG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SLLKVKPILHFENKLIVPYEKIRTRKKAMNRLFELFGEDAEKGKPLRAVVIHANREEEAD
HHHHHHHHEEECCCEECCHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEECCCHHHHH
QIIEELSKQYAHVEFYKSYFGPVIGTHLGEGAMGIAWYTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
>Mature Secondary Structure
MKTAVVTDSTAYIPKDLRDRYNIHMIPLNVIFGETSYREEIDMSWKDYYKEVKAHENLPT
CCCEEECCCCCCCCHHHHCCCCEEEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCC
TSQPAYGELISLYEKLGETYDAVISIHLSSGISGTFNSAVSASGMLEGIKVYPFDSEISC
CCCCHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCHHHH
MAQGFYAIEAAEMAEKGAAPEEIIRHLDHMKTSMRAYFMVDDLSHLQRGGRLSGAQAFVG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SLLKVKPILHFENKLIVPYEKIRTRKKAMNRLFELFGEDAEKGKPLRAVVIHANREEEAD
HHHHHHHHEEECCCEECCHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEECCCHHHHH
QIIEELSKQYAHVEFYKSYFGPVIGTHLGEGAMGIAWYTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378 [H]