Click here to switch to the map view.

The map label for this gene is yvyF [H]

Identifier: 52787468

GI number: 52787468

Start: 3606679

End: 3607098

Strand: Reverse

Name: yvyF [H]

Synonym: BLi03788

Alternate gene names: 52787468

Gene position: 3607098-3606679 (Counterclockwise)

Preceding gene: 52787469

Following gene: 52787467

Centisome position: 85.42

GC content: 40.71

Gene sequence:

>420_bases
ATGAGTCAATTGGCGAATTGTCCAAGATGTAACGCATTGTTTATGAAAAGCAGTTTTCAAACCGTTTGCGCTTCATGCTT
GAAAGAAGAAGAGCGCGCGTATGAAATTGTTTATAAATTTCTGAAAAAACAGGAAAACCGGCAGTCCACGATGTTTCAGA
TCGTAGAAAAAACAGGTGTCGAAGAAGAGTTAATATTGAAGTTTATTAGACAGAAACGCATTCAAATCTCTAATTTCCCG
AATCTCGGCTATCCGTGCGAAAGGTGCGGCACGCTTATTCGGGAAGGACGTTATTGCATGTCATGCGAGCAGGATTTGGC
ATCGCAAATGAGTCAATTAGACCAGCTGGAGCAGCTTGAAAGAGAGAGAAATAATAGTTCTAAAGGCACGTACTATACCT
TTAAGCCCAAAAATGACTGA

Upstream 100 bases:

>100_bases
GAAGCAAAATCTGTATCATCATATACATTAATTAGAAGCTAAATCATTTTTCTTCCCTGCCGATATAAAAAATAGAATTT
AAGGATAGGGGTCAAAGTTT

Downstream 100 bases:

>100_bases
TTCCCTAAACTAACTTGAAGCTCAGACGATAAAATGAGTATGATCATAGATAACTATGGCGGAAAGTGAGAGGAATCCCA
TGAAGATCAACCAATATGGA

Product: YvyF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSQLANCPRCNALFMKSSFQTVCASCLKEEERAYEIVYKFLKKQENRQSTMFQIVEKTGVEEELILKFIRQKRIQISNFP
NLGYPCERCGTLIREGRYCMSCEQDLASQMSQLDQLEQLERERNNSSKGTYYTFKPKND

Sequences:

>Translated_139_residues
MSQLANCPRCNALFMKSSFQTVCASCLKEEERAYEIVYKFLKKQENRQSTMFQIVEKTGVEEELILKFIRQKRIQISNFP
NLGYPCERCGTLIREGRYCMSCEQDLASQMSQLDQLEQLERERNNSSKGTYYTFKPKND
>Mature_138_residues
SQLANCPRCNALFMKSSFQTVCASCLKEEERAYEIVYKFLKKQENRQSTMFQIVEKTGVEEELILKFIRQKRIQISNFPN
LGYPCERCGTLIREGRYCMSCEQDLASQMSQLDQLEQLERERNNSSKGTYYTFKPKND

Specific function: May be involved in the assembly, structure, or function of the flagellum. May polymerize to form a filamentous structure that is part of the flagellum [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium fliF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022258 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16353; Mature: 16222

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLANCPRCNALFMKSSFQTVCASCLKEEERAYEIVYKFLKKQENRQSTMFQIVEKTGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
EEELILKFIRQKRIQISNFPNLGYPCERCGTLIREGRYCMSCEQDLASQMSQLDQLEQLE
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RERNNSSKGTYYTFKPKND
HHHCCCCCCCEEECCCCCC
>Mature Secondary Structure 
SQLANCPRCNALFMKSSFQTVCASCLKEEERAYEIVYKFLKKQENRQSTMFQIVEKTGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
EEELILKFIRQKRIQISNFPNLGYPCERCGTLIREGRYCMSCEQDLASQMSQLDQLEQLE
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RERNNSSKGTYYTFKPKND
HHHCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377 [H]