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The map label for this gene is flgM [H]

Identifier: 52787467

GI number: 52787467

Start: 3606333

End: 3606599

Strand: Reverse

Name: flgM [H]

Synonym: BLi03787

Alternate gene names: 52787467

Gene position: 3606599-3606333 (Counterclockwise)

Preceding gene: 52787468

Following gene: 52787466

Centisome position: 85.41

GC content: 41.57

Gene sequence:

>267_bases
ATGAAGATCAACCAATATGGAACACAACCTGTTAATCCTTATCATAAATCATTTGAAAAACAAACAGCTTCTTCACAGGG
AGCAGCCCAGCCGGAAGACAAAGTTGAGATTTCCGCGAAAGCAAAGGAGCTGCAAAAAGGCCCTGATTTAATGAAGGAGC
GTCAGGAGAAAATTGCCCAGCTGAAAGCAGCCGTGGAGAATGGAACGTACAAAGTTGACGGCAAAGGCATAGCTGAAAAA
ATGGTCAATTTTTATAAACAGCAATAA

Upstream 100 bases:

>100_bases
TTTAAGCCCAAAAATGACTGATTCCCTAAACTAACTTGAAGCTCAGACGATAAAATGAGTATGATCATAGATAACTATGG
CGGAAAGTGAGAGGAATCCC

Downstream 100 bases:

>100_bases
AAGGAGGAAGTCAGTTCAGTGAAACGGGTGATTGAAGAGCTGGAGCGCTTATGCGTGCTGCATGAACATCTGCTGTCTCT
GTCGGAACAAAAAACGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Anti-sigma-D factor [H]

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKINQYGTQPVNPYHKSFEKQTASSQGAAQPEDKVEISAKAKELQKGPDLMKERQEKIAQLKAAVENGTYKVDGKGIAEK
MVNFYKQQ

Sequences:

>Translated_88_residues
MKINQYGTQPVNPYHKSFEKQTASSQGAAQPEDKVEISAKAKELQKGPDLMKERQEKIAQLKAAVENGTYKVDGKGIAEK
MVNFYKQQ
>Mature_88_residues
MKINQYGTQPVNPYHKSFEKQTASSQGAAQPEDKVEISAKAKELQKGPDLMKERQEKIAQLKAAVENGTYKVDGKGIAEK
MVNFYKQQ

Specific function: Allows the coupling of early and late flagellar synthesis through the repression of RNA polymerase sigma-D factor- dependent transcription [H]

COG id: COG2747

COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007412 [H]

Pfam domain/function: PF04316 FlgM [H]

EC number: NA

Molecular weight: Translated: 9872; Mature: 9872

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINQYGTQPVNPYHKSFEKQTASSQGAAQPEDKVEISAKAKELQKGPDLMKERQEKIAQ
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
LKAAVENGTYKVDGKGIAEKMVNFYKQQ
HHHHHHCCCEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKINQYGTQPVNPYHKSFEKQTASSQGAAQPEDKVEISAKAKELQKGPDLMKERQEKIAQ
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
LKAAVENGTYKVDGKGIAEKMVNFYKQQ
HHHHHHCCCEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377 [H]