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The map label for this gene is yvcI [H]

Identifier: 52787409

GI number: 52787409

Start: 3551706

End: 3552170

Strand: Reverse

Name: yvcI [H]

Synonym: BLi03726

Alternate gene names: 52787409

Gene position: 3552170-3551706 (Counterclockwise)

Preceding gene: 52787411

Following gene: 52787408

Centisome position: 84.12

GC content: 51.18

Gene sequence:

>465_bases
TTGCAAAGAGTGACGAATTGTGTGCTGACTTCAGGTGATAAAGTCCTGTTGCTGCAAAAGCCCAGACGAGGCTGGTGGGT
GGCCCCCGGCGGCAAAATGGAAAGCGGGGAAACCGTCAGGGACGCCGTTATCAGGGAATACCGCGAAGAGACGGGCCTGT
ATGTGCTGAACCCGCAGCTGAAAGGAATATTCACCTTTATCATAAAGGAAAATGATCAGGTTGTATCTGAATGGATGATG
TTCACATTCGTCGCCGATCATTATACAGGCAAGCATGTAGAAGAATCAGAAGAAGGCATCATCAGGTGGCATCAGGCGGG
GGACGTCGGTAGCTTGCCGATGGCGCCGGGCGACGTCCATATTCTTGATTTTATGCTGAAAGGCAAAGGACTGCTTCACG
GCACCTTTACGTATACGCCTGACTTTGAATTGCTGTCCTATCGCCTCGACCCGCAAGGCGAATAA

Upstream 100 bases:

>100_bases
GGCGATTTTCGCGGCGGAACTGCATGTTCATTGTGAGCGGGGACAGGAAACGGTATAATAGAAAAAAGAATTGAAGGAAT
AAAAGGATGGGTGACAGACT

Downstream 100 bases:

>100_bases
ACATAAGAGGGGGAGAGAAGCATGAACGCGAATGGAGGCCATGATATACAGCTTGTGATCATAACCGGAATGTCAGGGGC
AGGAAAAACAGTGGCGATTC

Product: YvcI

Products: CMP; diphosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MQRVTNCVLTSGDKVLLLQKPRRGWWVAPGGKMESGETVRDAVIREYREETGLYVLNPQLKGIFTFIIKENDQVVSEWMM
FTFVADHYTGKHVEESEEGIIRWHQAGDVGSLPMAPGDVHILDFMLKGKGLLHGTFTYTPDFELLSYRLDPQGE

Sequences:

>Translated_154_residues
MQRVTNCVLTSGDKVLLLQKPRRGWWVAPGGKMESGETVRDAVIREYREETGLYVLNPQLKGIFTFIIKENDQVVSEWMM
FTFVADHYTGKHVEESEEGIIRWHQAGDVGSLPMAPGDVHILDFMLKGKGLLHGTFTYTPDFELLSYRLDPQGE
>Mature_154_residues
MQRVTNCVLTSGDKVLLLQKPRRGWWVAPGGKMESGETVRDAVIREYREETGLYVLNPQLKGIFTFIIKENDQVVSEWMM
FTFVADHYTGKHVEESEEGIIRWHQAGDVGSLPMAPGDVHILDFMLKGKGLLHGTFTYTPDFELLSYRLDPQGE

Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 17545; Mature: 17545

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVTNCVLTSGDKVLLLQKPRRGWWVAPGGKMESGETVRDAVIREYREETGLYVLNPQL
CCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCC
KGIFTFIIKENDQVVSEWMMFTFVADHYTGKHVEESEEGIIRWHQAGDVGSLPMAPGDVH
CEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEE
ILDFMLKGKGLLHGTFTYTPDFELLSYRLDPQGE
EEEEEECCCCEEEEEEEECCCCEEEEEECCCCCC
>Mature Secondary Structure
MQRVTNCVLTSGDKVLLLQKPRRGWWVAPGGKMESGETVRDAVIREYREETGLYVLNPQL
CCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCC
KGIFTFIIKENDQVVSEWMMFTFVADHYTGKHVEESEEGIIRWHQAGDVGSLPMAPGDVH
CEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEE
ILDFMLKGKGLLHGTFTYTPDFELLSYRLDPQGE
EEEEEECCCCEEEEEEEECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe; Mn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; H2O [C]

Specific reaction: CTP + H2O = CMP + diphosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]