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The map label for this gene is yvdD [H]

Identifier: 52787394

GI number: 52787394

Start: 3539688

End: 3540230

Strand: Reverse

Name: yvdD [H]

Synonym: BLi03711

Alternate gene names: 52787394

Gene position: 3540230-3539688 (Counterclockwise)

Preceding gene: 52787397

Following gene: 52787392

Centisome position: 83.84

GC content: 50.64

Gene sequence:

>543_bases
ATGGGGGCGGACCCGGAGTACAAGAAGAAAGCTGCAGAGCTTGGCGTTTATATTGCCGAGAAGGGGCTTCGCCTTGTTTA
CGGAGGATCGAGAATGGGATTGATGGGCGTGATTGCGGATACCGTATTGGAAAACGGCGGGGAAGTCGTCGGCGTTATGC
CGAAAGGCCTTTTTACAGGGGAAATCGTTCATCAGCAGTTGACGGAGCTGATCGAAGTGAGCGGCATGCATGAGCGCAAA
GCGAAAATGAGTGAATTAGCTGACGGCTTTATCGCGATGCCCGGAGGCTTCGGCACGTTTGAAGAGCTGTTTGAAGTGCT
CTGCTGGGCGCAGATCGGCATCCATCAAAAGCCGATCGGACTTTACAATGTGAACGGCTATTTTGAACCCCTTCTTAAAA
TGCTCGAATACAGCGTTCAAGAAGGCTTTTCGAACAAATCGCACCTTGAGCTGATTCATGCTTCGGCAAGCCCTGCGGAG
TTGATCGGGAACATGAATGATTATCGCTACCCTGTCCTCGAGAAAAAGTGGAAGGATTTATAG

Upstream 100 bases:

>100_bases
CGGAACAAACAATATATAGTACAATGTTAATTGCTTTTATCAATATATGGAGTTGGAGTGAGCGAAAGTGAAAACGGTAT
GCGTATATTCAGGATCAAAT

Downstream 100 bases:

>100_bases
AAGCTTTACATATAGCGAATGGGACAACCCATTTGGAGTAAAAAAAAGCTGCCGGTGACTCCGGCAGCTTTTTGGCTGTT
TACTTCTGTGCGTCGATATT

Product: YvdD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MGADPEYKKKAAELGVYIAEKGLRLVYGGSRMGLMGVIADTVLENGGEVVGVMPKGLFTGEIVHQQLTELIEVSGMHERK
AKMSELADGFIAMPGGFGTFEELFEVLCWAQIGIHQKPIGLYNVNGYFEPLLKMLEYSVQEGFSNKSHLELIHASASPAE
LIGNMNDYRYPVLEKKWKDL

Sequences:

>Translated_180_residues
MGADPEYKKKAAELGVYIAEKGLRLVYGGSRMGLMGVIADTVLENGGEVVGVMPKGLFTGEIVHQQLTELIEVSGMHERK
AKMSELADGFIAMPGGFGTFEELFEVLCWAQIGIHQKPIGLYNVNGYFEPLLKMLEYSVQEGFSNKSHLELIHASASPAE
LIGNMNDYRYPVLEKKWKDL
>Mature_179_residues
GADPEYKKKAAELGVYIAEKGLRLVYGGSRMGLMGVIADTVLENGGEVVGVMPKGLFTGEIVHQQLTELIEVSGMHERKA
KMSELADGFIAMPGGFGTFEELFEVLCWAQIGIHQKPIGLYNVNGYFEPLLKMLEYSVQEGFSNKSHLELIHASASPAEL
IGNMNDYRYPVLEKKWKDL

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=207, Percent_Identity=36.231884057971, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 19913; Mature: 19782

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGADPEYKKKAAELGVYIAEKGLRLVYGGSRMGLMGVIADTVLENGGEVVGVMPKGLFTG
CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH
EIVHQQLTELIEVSGMHERKAKMSELADGFIAMPGGFGTFEELFEVLCWAQIGIHQKPIG
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCE
LYNVNGYFEPLLKMLEYSVQEGFSNKSHLELIHASASPAELIGNMNDYRYPVLEKKWKDL
EEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
GADPEYKKKAAELGVYIAEKGLRLVYGGSRMGLMGVIADTVLENGGEVVGVMPKGLFTG
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH
EIVHQQLTELIEVSGMHERKAKMSELADGFIAMPGGFGTFEELFEVLCWAQIGIHQKPIG
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCE
LYNVNGYFEPLLKMLEYSVQEGFSNKSHLELIHASASPAELIGNMNDYRYPVLEKKWKDL
EEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]