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The map label for this gene is yvdB [H]

Identifier: 52787397

GI number: 52787397

Start: 3541721

End: 3543340

Strand: Reverse

Name: yvdB [H]

Synonym: BLi03714

Alternate gene names: 52787397

Gene position: 3543340-3541721 (Counterclockwise)

Preceding gene: 52787398

Following gene: 52787394

Centisome position: 83.91

GC content: 48.64

Gene sequence:

>1620_bases
ATGTTACGATTTTCAGGCAGATTTGAAGGATACAGCCTTAAGCGGTTTCAAAAAGATATTGTAGCAGGAATGGTCGTTGG
AGTCGTCGCGATTCCGCTTGGCATGGCTTTTGCTATAGCCTCGGGGGTGAAACCGGAACACGGTCTTTACACAGTGATTG
TCGCCGGTATTTTGATTTCGCTTCTCGGCGGGTCGAAATACCAGATTGGCGGACCGACAGGGGCCTTTGTCCCGATCCTG
TTCGCTATTGTGCTCCAATACGGATTTGAGAATCTGCTGATTGCCGGTTTTATGGCCGGAGTGATTCTGGTCATATTAGG
GCTGCTAAAACTCGGCAAGATCATCAAATTTATTCCGCGGCCGGTGATCATCGGATTTACGGCCGGAATCGCGGTGATTA
TTTTCACCGGAGAAATCGCCAAGTTTTTAGGCTTGAGAAATGTCGAGAAGCATGAGAGTTTTTATATGAATATGAGAGAG
GTTGTCATCAACCTGAATACGCTCAGCTTTTACAGCATTTTGACGGCTGTCGTATCGCTCTTCTTTGTGCTGTTTACGCC
AAAGGTTCTGCCGAAAGTGCCGGGAGCGCTCGCAGGCTTGCTTGTATCAACGGTCATGGCCACGATGCTGTTTCCCGAAC
AGGTGGTGACGATCGGATCAGCTTACGGCGAAATTCCGCGCAGCTTGCCGAGCTTTCAATTTCCTGAGTTGTCATTGGAA
AAAATCATTTACCTGATGCCTCCCGCTCTTGCGATTGCAATGCTCGGAGGAATCGAATCGCTGCTTTCCGCGATGGTGGC
AGACAATATGAAGGGGACAAGGCATGACAGCAATAAAGAACTTGTCGGCCAAGGAATTGCGAACATCGCCGCACCGCTGT
TCGGCGGTATTCCGGCGACAGGTGCGATTGCCCGTACGGCGACCAATATTAAAACGGGCGCTGCTTCTCCGATTTCAGGT
ATCGTACACGGTGTGTTCGTTTTATTGGTTCTGCTTTTGTTTGCGCCATACGCTTCCCTTATCCCGCTTGCAAGCATGTC
GCCGATTTTGATGGTGGTTGCTTGGAATATGAGTGAGCGGAAAGAGTTTATAAATATTTTGAAAATTAGAAATTCAGACT
CTGCCGTGCTTGTCGTCACATTTCTTTTAACCGTTTGGCAGGATCTTGTGTTTGGGGTGGCGGCCGGGATCCTGCTGGCG
ATCATCACCTTTATCGCCAGAATGAGCAAGTCGTTCCGCATTAAAAAAGATGTGTCTGAATCGATCGTCCAGTCGGCAGC
TGCAGCGGAAGAAAAGCATTTTCAACGCTCTGTCAGCATCTATTCGGTTGAAGGCCCGCTGTTTTTCGGCTCATCGAATT
CATTGGAGGATTCAATTTTGGACAAAGGCCACCCGCCAAAACTCCTCATCCTGCTGATGAATAAAGTAGACTACATGGAC
TCTTCCGCAGAAGGCAGCCTGATGACGATCGTCAACCGTGTCCACCAGCAAAACGGGAAAGTGATGATCGTGGGTCTTCA
GCAGCAGCCGCGTGAGCTTCTTCATAAAACAGGGCTGTTTCATAAGATCGGCAAAAAGCATTTTGTCGACAGGCCTGAAC
AAATATTTGACGTGACATAA

Upstream 100 bases:

>100_bases
TGATCCAAAGACCGGCCGTTTGGATGTTGTTGAAGATGGTTATTCACGTGAAGACGTTTCGCTTTCGGAAGTGCGATGAT
CAAATGGGGGGATAGATTGA

Downstream 100 bases:

>100_bases
CCAAGAAAACCGCCTGTTTCGGCCGGACTGAAGCAGGCGGTTTCTTTTATTGGGCTGCTTTTACATATGCGCCTTTTTTC
ATGGCGGCTATTGCCGTTTC

Product: YvdB

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MLRFSGRFEGYSLKRFQKDIVAGMVVGVVAIPLGMAFAIASGVKPEHGLYTVIVAGILISLLGGSKYQIGGPTGAFVPIL
FAIVLQYGFENLLIAGFMAGVILVILGLLKLGKIIKFIPRPVIIGFTAGIAVIIFTGEIAKFLGLRNVEKHESFYMNMRE
VVINLNTLSFYSILTAVVSLFFVLFTPKVLPKVPGALAGLLVSTVMATMLFPEQVVTIGSAYGEIPRSLPSFQFPELSLE
KIIYLMPPALAIAMLGGIESLLSAMVADNMKGTRHDSNKELVGQGIANIAAPLFGGIPATGAIARTATNIKTGAASPISG
IVHGVFVLLVLLLFAPYASLIPLASMSPILMVVAWNMSERKEFINILKIRNSDSAVLVVTFLLTVWQDLVFGVAAGILLA
IITFIARMSKSFRIKKDVSESIVQSAAAAEEKHFQRSVSIYSVEGPLFFGSSNSLEDSILDKGHPPKLLILLMNKVDYMD
SSAEGSLMTIVNRVHQQNGKVMIVGLQQQPRELLHKTGLFHKIGKKHFVDRPEQIFDVT

Sequences:

>Translated_539_residues
MLRFSGRFEGYSLKRFQKDIVAGMVVGVVAIPLGMAFAIASGVKPEHGLYTVIVAGILISLLGGSKYQIGGPTGAFVPIL
FAIVLQYGFENLLIAGFMAGVILVILGLLKLGKIIKFIPRPVIIGFTAGIAVIIFTGEIAKFLGLRNVEKHESFYMNMRE
VVINLNTLSFYSILTAVVSLFFVLFTPKVLPKVPGALAGLLVSTVMATMLFPEQVVTIGSAYGEIPRSLPSFQFPELSLE
KIIYLMPPALAIAMLGGIESLLSAMVADNMKGTRHDSNKELVGQGIANIAAPLFGGIPATGAIARTATNIKTGAASPISG
IVHGVFVLLVLLLFAPYASLIPLASMSPILMVVAWNMSERKEFINILKIRNSDSAVLVVTFLLTVWQDLVFGVAAGILLA
IITFIARMSKSFRIKKDVSESIVQSAAAAEEKHFQRSVSIYSVEGPLFFGSSNSLEDSILDKGHPPKLLILLMNKVDYMD
SSAEGSLMTIVNRVHQQNGKVMIVGLQQQPRELLHKTGLFHKIGKKHFVDRPEQIFDVT
>Mature_539_residues
MLRFSGRFEGYSLKRFQKDIVAGMVVGVVAIPLGMAFAIASGVKPEHGLYTVIVAGILISLLGGSKYQIGGPTGAFVPIL
FAIVLQYGFENLLIAGFMAGVILVILGLLKLGKIIKFIPRPVIIGFTAGIAVIIFTGEIAKFLGLRNVEKHESFYMNMRE
VVINLNTLSFYSILTAVVSLFFVLFTPKVLPKVPGALAGLLVSTVMATMLFPEQVVTIGSAYGEIPRSLPSFQFPELSLE
KIIYLMPPALAIAMLGGIESLLSAMVADNMKGTRHDSNKELVGQGIANIAAPLFGGIPATGAIARTATNIKTGAASPISG
IVHGVFVLLVLLLFAPYASLIPLASMSPILMVVAWNMSERKEFINILKIRNSDSAVLVVTFLLTVWQDLVFGVAAGILLA
IITFIARMSKSFRIKKDVSESIVQSAAAAEEKHFQRSVSIYSVEGPLFFGSSNSLEDSILDKGHPPKLLILLMNKVDYMD
SSAEGSLMTIVNRVHQQNGKVMIVGLQQQPRELLHKTGLFHKIGKKHFVDRPEQIFDVT

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=537, Percent_Identity=27.3743016759777, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI262206075, Length=537, Percent_Identity=27.3743016759777, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI262206069, Length=537, Percent_Identity=27.3743016759777, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI262206063, Length=537, Percent_Identity=27.3743016759777, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI45827800, Length=494, Percent_Identity=22.6720647773279, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI39752683, Length=494, Percent_Identity=22.6720647773279, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI16306483, Length=550, Percent_Identity=22.1818181818182, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI20336282, Length=550, Percent_Identity=22.1818181818182, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI45827802, Length=447, Percent_Identity=23.2662192393736, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI269784651, Length=490, Percent_Identity=21.0204081632653, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4557535, Length=522, Percent_Identity=22.6053639846743, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI94721259, Length=476, Percent_Identity=20.1680672268908, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI94721257, Length=476, Percent_Identity=20.1680672268908, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI94721253, Length=476, Percent_Identity=20.1680672268908, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI94721255, Length=476, Percent_Identity=20.1680672268908, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI100913030, Length=521, Percent_Identity=23.4165067178503, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI4505697, Length=361, Percent_Identity=21.8836565096953, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081859, Length=532, Percent_Identity=36.6541353383459, Blast_Score=303, Evalue=2e-83,
Organism=Caenorhabditis elegans, GI86565215, Length=529, Percent_Identity=25.7088846880907, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17551690, Length=488, Percent_Identity=23.155737704918, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI86564196, Length=498, Percent_Identity=23.6947791164659, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17566848, Length=448, Percent_Identity=22.9910714285714, Blast_Score=102, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17562578, Length=526, Percent_Identity=22.2433460076046, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI86564876, Length=381, Percent_Identity=23.0971128608924, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI86565209, Length=237, Percent_Identity=26.1603375527426, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI86565211, Length=237, Percent_Identity=26.1603375527426, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI86565213, Length=251, Percent_Identity=26.2948207171315, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193203292, Length=504, Percent_Identity=21.031746031746, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=578, Percent_Identity=23.5294117647059, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6321564, Length=478, Percent_Identity=21.3389121338912, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6319771, Length=170, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24649801, Length=434, Percent_Identity=27.1889400921659, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI19922482, Length=416, Percent_Identity=27.1634615384615, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI85815873, Length=416, Percent_Identity=25.9615384615385, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24647160, Length=426, Percent_Identity=23.943661971831, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21355087, Length=433, Percent_Identity=23.7875288683603, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24651449, Length=441, Percent_Identity=24.4897959183673, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24663084, Length=444, Percent_Identity=25.4504504504505, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI21357695, Length=444, Percent_Identity=25.4504504504505, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI21358229, Length=367, Percent_Identity=24.5231607629428, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24666186, Length=298, Percent_Identity=23.1543624161074, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21358633, Length=138, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 58260; Mature: 58260

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFSGRFEGYSLKRFQKDIVAGMVVGVVAIPLGMAFAIASGVKPEHGLYTVIVAGILIS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LLGGSKYQIGGPTGAFVPILFAIVLQYGFENLLIAGFMAGVILVILGLLKLGKIIKFIPR
HHCCCEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVIIGFTAGIAVIIFTGEIAKFLGLRNVEKHESFYMNMREVVINLNTLSFYSILTAVVSL
CCEEEEHHCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FFVLFTPKVLPKVPGALAGLLVSTVMATMLFPEQVVTIGSAYGEIPRSLPSFQFPELSLE
HHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KIIYLMPPALAIAMLGGIESLLSAMVADNMKGTRHDSNKELVGQGIANIAAPLFGGIPAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
GAIARTATNIKTGAASPISGIVHGVFVLLVLLLFAPYASLIPLASMSPILMVVAWNMSER
CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCHHHH
KEFINILKIRNSDSAVLVVTFLLTVWQDLVFGVAAGILLAIITFIARMSKSFRIKKDVSE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SIVQSAAAAEEKHFQRSVSIYSVEGPLFFGSSNSLEDSILDKGHPPKLLILLMNKVDYMD
HHHHHHHHHHHHHHHHHCEEEEECCCEEECCCCCCHHHHHCCCCCCCEEHHHHHHHHHCC
SSAEGSLMTIVNRVHQQNGKVMIVGLQQQPRELLHKTGLFHKIGKKHFVDRPEQIFDVT
CCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MLRFSGRFEGYSLKRFQKDIVAGMVVGVVAIPLGMAFAIASGVKPEHGLYTVIVAGILIS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LLGGSKYQIGGPTGAFVPILFAIVLQYGFENLLIAGFMAGVILVILGLLKLGKIIKFIPR
HHCCCEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVIIGFTAGIAVIIFTGEIAKFLGLRNVEKHESFYMNMREVVINLNTLSFYSILTAVVSL
CCEEEEHHCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FFVLFTPKVLPKVPGALAGLLVSTVMATMLFPEQVVTIGSAYGEIPRSLPSFQFPELSLE
HHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KIIYLMPPALAIAMLGGIESLLSAMVADNMKGTRHDSNKELVGQGIANIAAPLFGGIPAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
GAIARTATNIKTGAASPISGIVHGVFVLLVLLLFAPYASLIPLASMSPILMVVAWNMSER
CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCHHHH
KEFINILKIRNSDSAVLVVTFLLTVWQDLVFGVAAGILLAIITFIARMSKSFRIKKDVSE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SIVQSAAAAEEKHFQRSVSIYSVEGPLFFGSSNSLEDSILDKGHPPKLLILLMNKVDYMD
HHHHHHHHHHHHHHHHHCEEEEECCCEEECCCCCCHHHHHCCCCCCCEEHHHHHHHHHCC
SSAEGSLMTIVNRVHQQNGKVMIVGLQQQPRELLHKTGLFHKIGKKHFVDRPEQIFDVT
CCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]