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The map label for this gene is ysoA [H]

Identifier: 52786686

GI number: 52786686

Start: 2841615

End: 2842622

Strand: Reverse

Name: ysoA [H]

Synonym: BLi02954

Alternate gene names: 52786686

Gene position: 2842622-2841615 (Counterclockwise)

Preceding gene: 52786687

Following gene: 52786685

Centisome position: 67.32

GC content: 46.43

Gene sequence:

>1008_bases
ATGAAGCATGACAAGAAGAACTCGAAGATCATACCGTTCCCGAACGTAAAGGAGCGTTTAGTGCACAAAGGGATGGGTGC
GCTCAAAGAAAAGAATTACCATGAAGCGCTCAGGCTGTTTTCTGAAGCGAAGCGCTATAATGATGAGGAATCTGATATTT
ATCTGGGAATGGCCATCTGCCTGCTTGAAATCGGCGAGCTTGAAGAAGCGAAAGGCATCTGCGAAAAAATGCTGAAGGAA
GGCCACGGCCACTATTTTACCGTTTTACAAGTCTATATGACGATTTTAATCCAGCTCAGACAATACGAAAAAGTTAAAGA
AACGATCGAAGCTGTACTCGAAGAAAACAAGCTTCCTCCTGAAAGCGCGGAACAGTTTTATAAACTCCTTGATTTCAGCC
GCAAGATGACGGAAGACCCGGGGCCTGAGGACATCACCGAAGACCTTCCCGAGACGGAGGAGGTTGATCAGGAAAGGCTT
TTGAATGACACGGAAGAGCAGGTTAAGCTTCTTCACGGGCTGAAGGACCGCAATCTGACAAGCTATATCGGCTTGTTGAA
AACGATTCTGCAAAACCCGAGCGCACATCCTGTCGTAAAAACGATGATTCTTCAGCTTTTAGCCGAGTCAGACCATGAAA
AGCCGACGCTTGTCGCAAAATTTGGCGATTCGATGACAATTAATCCGACAGAGACGGTCAAGCCTGATGACATGCCGATA
TTAAAGCATGTTCTGAGCGTGCTCGATGATACGCTGGGGAATGAAAATCCCACGCTGTACCAGGCGGTCGAAGAGCTGTG
GAGAAGGCATATTTACGTCCTCTATCCGTTTCAGCCGAAATACTCAAACCGCGAGCTCTGGGCTGCTGCACTGCATAAAG
TCGGATATGAGATGCACGGGATCGACATCGATAAAGAGGAGCTTCATATTCTCTATGAATTCAATGACAGACAGCTTGAC
GAAGCCTGCGCGCTGATCAAAGACATAGAAGAAATTTCTTATTTGTAA

Upstream 100 bases:

>100_bases
TTTTTGCTGGCGGCAGCATACTGCCGCCGGTTCTTTCTTGTGTTTAGCGGGCCGGGTTGATACACTTGTTAAAAAATAAG
TGCCTGAAAGGAACTTAGAA

Downstream 100 bases:

>100_bases
ATGTTGAAAGCAGCAGGCATTGTGTTATAATATAGTGGTTGCATTTGTGAAAAACGGAAGTTGATCCGTTTGCCGCTAAA
GATTCATTATTTATCTTTGT

Product: YsoA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKHDKKNSKIIPFPNVKERLVHKGMGALKEKNYHEALRLFSEAKRYNDEESDIYLGMAICLLEIGELEEAKGICEKMLKE
GHGHYFTVLQVYMTILIQLRQYEKVKETIEAVLEENKLPPESAEQFYKLLDFSRKMTEDPGPEDITEDLPETEEVDQERL
LNDTEEQVKLLHGLKDRNLTSYIGLLKTILQNPSAHPVVKTMILQLLAESDHEKPTLVAKFGDSMTINPTETVKPDDMPI
LKHVLSVLDDTLGNENPTLYQAVEELWRRHIYVLYPFQPKYSNRELWAAALHKVGYEMHGIDIDKEELHILYEFNDRQLD
EACALIKDIEEISYL

Sequences:

>Translated_335_residues
MKHDKKNSKIIPFPNVKERLVHKGMGALKEKNYHEALRLFSEAKRYNDEESDIYLGMAICLLEIGELEEAKGICEKMLKE
GHGHYFTVLQVYMTILIQLRQYEKVKETIEAVLEENKLPPESAEQFYKLLDFSRKMTEDPGPEDITEDLPETEEVDQERL
LNDTEEQVKLLHGLKDRNLTSYIGLLKTILQNPSAHPVVKTMILQLLAESDHEKPTLVAKFGDSMTINPTETVKPDDMPI
LKHVLSVLDDTLGNENPTLYQAVEELWRRHIYVLYPFQPKYSNRELWAAALHKVGYEMHGIDIDKEELHILYEFNDRQLD
EACALIKDIEEISYL
>Mature_335_residues
MKHDKKNSKIIPFPNVKERLVHKGMGALKEKNYHEALRLFSEAKRYNDEESDIYLGMAICLLEIGELEEAKGICEKMLKE
GHGHYFTVLQVYMTILIQLRQYEKVKETIEAVLEENKLPPESAEQFYKLLDFSRKMTEDPGPEDITEDLPETEEVDQERL
LNDTEEQVKLLHGLKDRNLTSYIGLLKTILQNPSAHPVVKTMILQLLAESDHEKPTLVAKFGDSMTINPTETVKPDDMPI
LKHVLSVLDDTLGNENPTLYQAVEELWRRHIYVLYPFQPKYSNRELWAAALHKVGYEMHGIDIDKEELHILYEFNDRQLD
EACALIKDIEEISYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006822
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF04733 Coatomer_E [H]

EC number: NA

Molecular weight: Translated: 38894; Mature: 38894

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHDKKNSKIIPFPNVKERLVHKGMGALKEKNYHEALRLFSEAKRYNDEESDIYLGMAIC
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LLEIGELEEAKGICEKMLKEGHGHYFTVLQVYMTILIQLRQYEKVKETIEAVLEENKLPP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ESAEQFYKLLDFSRKMTEDPGPEDITEDLPETEEVDQERLLNDTEEQVKLLHGLKDRNLT
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHH
SYIGLLKTILQNPSAHPVVKTMILQLLAESDHEKPTLVAKFGDSMTINPTETVKPDDMPI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCCCCCCCCCCHH
LKHVLSVLDDTLGNENPTLYQAVEELWRRHIYVLYPFQPKYSNRELWAAALHKVGYEMHG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCHHCC
IDIDKEELHILYEFNDRQLDEACALIKDIEEISYL
CCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHDKKNSKIIPFPNVKERLVHKGMGALKEKNYHEALRLFSEAKRYNDEESDIYLGMAIC
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LLEIGELEEAKGICEKMLKEGHGHYFTVLQVYMTILIQLRQYEKVKETIEAVLEENKLPP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ESAEQFYKLLDFSRKMTEDPGPEDITEDLPETEEVDQERLLNDTEEQVKLLHGLKDRNLT
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHH
SYIGLLKTILQNPSAHPVVKTMILQLLAESDHEKPTLVAKFGDSMTINPTETVKPDDMPI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCCCCCCCCCCHH
LKHVLSVLDDTLGNENPTLYQAVEELWRRHIYVLYPFQPKYSNRELWAAALHKVGYEMHG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCHHCC
IDIDKEELHILYEFNDRQLDEACALIKDIEEISYL
CCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]