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The map label for this gene is safA [H]

Identifier: 52786643

GI number: 52786643

Start: 2797902

End: 2798954

Strand: Reverse

Name: safA [H]

Synonym: BLi02911

Alternate gene names: 52786643

Gene position: 2798954-2797902 (Counterclockwise)

Preceding gene: 52786644

Following gene: 52786642

Centisome position: 66.28

GC content: 48.81

Gene sequence:

>1053_bases
TTGAAAATTCATATTGTCCAAAAGGGCGATTCTCTGGAAAAAATCGCGGAAAGATATGAAGTGGACTTTGAAGAACTGAA
AAAGCTGAATTCGCAGCTGAGCAATCCAGACTTGATCATGCCGGGCATGAAAATCAAAGTACCGTCAGGGGGAGTGCCGG
TCAAAAAAGAAGAACAGCTCAATATGCGAAAGGAATTACCGAAAAAACAGCAGGAACATCCATTTGCAAAAGAAAAGCCG
AAAAGCAAGCTTGATGTTGAAGATATAAAACCGAAAGAAAAGCCTTCGGTTCCTTATGTTCCGCCTGTCCCGAACATCGG
ACAATCAAGTTTGCCTGAAGGCGACATTTCGAATTTGTATCAAAGCGTCAATCAGCTTCATCAGCCGTACGTACCTCCAA
AACCTTATGAACATCAAGAGAAAGGCCCCAACATGTATAATCCATGGACAAATGAGGAGGAAAACCATATGGAAAATGTC
AATTATCCGAATGTTCCGCAGCCGCCAAATGTCGGTGCAGCAGGTGATGAAAATAAGCAGTTTCACGGCATGCCGAATGT
AGCTGCAGCGGGATATCATCACCATCCATATCCTTATCCGTTCTATCCTGGAGGCTGCTGGATTCCTGTTTCACCGGTGC
TGCCTGGATCGGGATTGTGCCATCCTTGGTATCCATATCCTGCTCAAATGCCTTATATGCATCAGCCTAGCTATGTATCT
CCTGCTGAATATGACGATGATGACAACATGGGGCATGACAATGCCGGTCATCACGGATACCATCATCAGCCGATGACTGC
CCCGGCATATGCGCCTTACCAGCCGTTCCCGGGATTTGCACCGCCAAACGTCGGTCACGCCGGGGACCCTAATATGGCAC
ACGGCAAAGAAGATGACTGCGGGTGCGGGCCGGGCCAATTCCCGGGAGGTTTTCCAGGTGCGGCGCCATATGGACAGATG
CCGCAAATGGGAGCTCCGTACGGTATGGGGGGATACGGACAGCAGCCTGCAGGGGGACAGATGTTTAACAGACCGGAAGA
TGATGAAGACTGA

Upstream 100 bases:

>100_bases
GTTTTTATCATAACCCCTCCGCTATGCGCATAAATTTGTGGAGAAGCATATTTGTTATTCTCATCTGTTCGTTCACGTTT
TTGCATAGGAGGGGAAAACG

Downstream 100 bases:

>100_bases
TTCGGAATGGGACGATGATCTATCGTTCCTTTTTTATTGTGGACCGCTATAAACATTTTCATGCTATTTAACGGGAATGT
CTATAACTGTCAAGGGTAAC

Product: SafA

Products: NA

Alternate protein names: Morphogenetic protein safA [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKIHIVQKGDSLEKIAERYEVDFEELKKLNSQLSNPDLIMPGMKIKVPSGGVPVKKEEQLNMRKELPKKQQEHPFAKEKP
KSKLDVEDIKPKEKPSVPYVPPVPNIGQSSLPEGDISNLYQSVNQLHQPYVPPKPYEHQEKGPNMYNPWTNEEENHMENV
NYPNVPQPPNVGAAGDENKQFHGMPNVAAAGYHHHPYPYPFYPGGCWIPVSPVLPGSGLCHPWYPYPAQMPYMHQPSYVS
PAEYDDDDNMGHDNAGHHGYHHQPMTAPAYAPYQPFPGFAPPNVGHAGDPNMAHGKEDDCGCGPGQFPGGFPGAAPYGQM
PQMGAPYGMGGYGQQPAGGQMFNRPEDDED

Sequences:

>Translated_350_residues
MKIHIVQKGDSLEKIAERYEVDFEELKKLNSQLSNPDLIMPGMKIKVPSGGVPVKKEEQLNMRKELPKKQQEHPFAKEKP
KSKLDVEDIKPKEKPSVPYVPPVPNIGQSSLPEGDISNLYQSVNQLHQPYVPPKPYEHQEKGPNMYNPWTNEEENHMENV
NYPNVPQPPNVGAAGDENKQFHGMPNVAAAGYHHHPYPYPFYPGGCWIPVSPVLPGSGLCHPWYPYPAQMPYMHQPSYVS
PAEYDDDDNMGHDNAGHHGYHHQPMTAPAYAPYQPFPGFAPPNVGHAGDPNMAHGKEDDCGCGPGQFPGGFPGAAPYGQM
PQMGAPYGMGGYGQQPAGGQMFNRPEDDED
>Mature_350_residues
MKIHIVQKGDSLEKIAERYEVDFEELKKLNSQLSNPDLIMPGMKIKVPSGGVPVKKEEQLNMRKELPKKQQEHPFAKEKP
KSKLDVEDIKPKEKPSVPYVPPVPNIGQSSLPEGDISNLYQSVNQLHQPYVPPKPYEHQEKGPNMYNPWTNEEENHMENV
NYPNVPQPPNVGAAGDENKQFHGMPNVAAAGYHHHPYPYPFYPGGCWIPVSPVLPGSGLCHPWYPYPAQMPYMHQPSYVS
PAEYDDDDNMGHDNAGHHGYHHQPMTAPAYAPYQPFPGFAPPNVGHAGDPNMAHGKEDDCGCGPGQFPGGFPGAAPYGQM
PQMGAPYGMGGYGQQPAGGQMFNRPEDDED

Specific function: Probably involved in the assembly of some coat protein components implicated in both lysozyme resistance and germination. Could be required for the assembly of CotG. Associates with SpoIVD during the early stage of coat assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore cortex. Note=At the coat- cortex interface [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR014248 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 38788; Mature: 38788

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHIVQKGDSLEKIAERYEVDFEELKKLNSQLSNPDLIMPGMKIKVPSGGVPVKKEEQL
CEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCHHHHH
NMRKELPKKQQEHPFAKEKPKSKLDVEDIKPKEKPSVPYVPPVPNIGQSSLPEGDISNLY
HHHHHCCHHHHHCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QSVNQLHQPYVPPKPYEHQEKGPNMYNPWTNEEENHMENVNYPNVPQPPNVGAAGDENKQ
HHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
FHGMPNVAAAGYHHHPYPYPFYPGGCWIPVSPVLPGSGLCHPWYPYPAQMPYMHQPSYVS
CCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAEYDDDDNMGHDNAGHHGYHHQPMTAPAYAPYQPFPGFAPPNVGHAGDPNMAHGKEDDC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GCGPGQFPGGFPGAAPYGQMPQMGAPYGMGGYGQQPAGGQMFNRPEDDED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIHIVQKGDSLEKIAERYEVDFEELKKLNSQLSNPDLIMPGMKIKVPSGGVPVKKEEQL
CEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCHHHHH
NMRKELPKKQQEHPFAKEKPKSKLDVEDIKPKEKPSVPYVPPVPNIGQSSLPEGDISNLY
HHHHHCCHHHHHCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QSVNQLHQPYVPPKPYEHQEKGPNMYNPWTNEEENHMENVNYPNVPQPPNVGAAGDENKQ
HHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
FHGMPNVAAAGYHHHPYPYPFYPGGCWIPVSPVLPGSGLCHPWYPYPAQMPYMHQPSYVS
CCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAEYDDDDNMGHDNAGHHGYHHQPMTAPAYAPYQPFPGFAPPNVGHAGDPNMAHGKEDDC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GCGPGQFPGGFPGAAPYGQMPQMGAPYGMGGYGQQPAGGQMFNRPEDDED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9770294; 9384377 [H]