Click here to switch to the map view.

The map label for this gene is yndL [H]

Identifier: 52786224

GI number: 52786224

Start: 2417525

End: 2418358

Strand: Reverse

Name: yndL [H]

Synonym: BLi02485

Alternate gene names: 52786224

Gene position: 2418358-2417525 (Counterclockwise)

Preceding gene: 52786225

Following gene: 52786220

Centisome position: 57.27

GC content: 47.24

Gene sequence:

>834_bases
ATGAAACCGGCCAAAGTATCCCTACTCCACCGATTGCTCCAGTGCCTGAAGCAATGTGTTGATTGTAACACAGTAAATCG
TTTTACAGCAATAAACATTTTTGTGAATATTTTATTGATTTCGGCTGTGATCTCATTCCCATATTCTGCTGCGGCCCATG
GCGCAACACAGTCCGGCGATCAATATTCAAGCTTTGAAGAATTGGAGCGGAATGAAGATCCAGCTTCTTACCGAATTACG
GAGAAGAACGCAAGAGTGCCGATGCTCATCATGGCCATCCATGGAGGCGGCATCGAACCCGGAACGAGCGAAATCGCCAA
TGAAGTGTCCAAAAACTATTCCCTGTACTTGTTTGAAGGGCTGAAATCATCAGGCAATACGGACCTTCACATTACAAGCA
CGCGTTTTGACGAGCCAGCGGCGCTCGCAATTACTGCAAGCCACCAGTATGTCATGTCGCTCCACGGCTATTACAGTGAA
GACCGCGATATTAAAGTAGGCGGCACAGACCGCGCTAAAATCAGAATATTGGTTGATGAGCTGAACCGCTCGGGGTTTGC
CGCTGAAATGCTGGGGACAGATGACAAGTATGCCGGAACCCATCCGAATAACATCGCCAACAAGTCGCTTTCCGGGCTGA
GCATTCAGCTTGAAATGAGCACGGGTTTCCGCAAATCTTTATTCGACCGGTTTACACTAAAAGACAGGGCGGCGACGCAA
AACGAAACGTTTTACCGATTTACAAAGCTGCTGACAGATTTTATTCATGAAAACTATGAAGAAGACGGAGGGGATTTCCC
CTCTGCAAAAATAAAACACCCCCTTCAAGTGTGA

Upstream 100 bases:

>100_bases
TTGTGAATTTAACAAAAAATTTACAAAGGAGATGATAAAGGCAATGACCAGGGTGAAAAGGATGAGATTTGCTGATTTGT
TGGATTTAGAGGCGGAGTAG

Downstream 100 bases:

>100_bases
ACTGACCCGTTAAAATGAGACTTAGAAAAAACACCTATGCTGCCTGTCCCCTGTATTCCAGTGGGGACAGGTAGTTTAAT
TTTGCCTGAATTCGTACATG

Product: YndL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKPAKVSLLHRLLQCLKQCVDCNTVNRFTAINIFVNILLISAVISFPYSAAAHGATQSGDQYSSFEELERNEDPASYRIT
EKNARVPMLIMAIHGGGIEPGTSEIANEVSKNYSLYLFEGLKSSGNTDLHITSTRFDEPAALAITASHQYVMSLHGYYSE
DRDIKVGGTDRAKIRILVDELNRSGFAAEMLGTDDKYAGTHPNNIANKSLSGLSIQLEMSTGFRKSLFDRFTLKDRAATQ
NETFYRFTKLLTDFIHENYEEDGGDFPSAKIKHPLQV

Sequences:

>Translated_277_residues
MKPAKVSLLHRLLQCLKQCVDCNTVNRFTAINIFVNILLISAVISFPYSAAAHGATQSGDQYSSFEELERNEDPASYRIT
EKNARVPMLIMAIHGGGIEPGTSEIANEVSKNYSLYLFEGLKSSGNTDLHITSTRFDEPAALAITASHQYVMSLHGYYSE
DRDIKVGGTDRAKIRILVDELNRSGFAAEMLGTDDKYAGTHPNNIANKSLSGLSIQLEMSTGFRKSLFDRFTLKDRAATQ
NETFYRFTKLLTDFIHENYEEDGGDFPSAKIKHPLQV
>Mature_277_residues
MKPAKVSLLHRLLQCLKQCVDCNTVNRFTAINIFVNILLISAVISFPYSAAAHGATQSGDQYSSFEELERNEDPASYRIT
EKNARVPMLIMAIHGGGIEPGTSEIANEVSKNYSLYLFEGLKSSGNTDLHITSTRFDEPAALAITASHQYVMSLHGYYSE
DRDIKVGGTDRAKIRILVDELNRSGFAAEMLGTDDKYAGTHPNNIANKSLSGLSIQLEMSTGFRKSLFDRFTLKDRAATQ
NETFYRFTKLLTDFIHENYEEDGGDFPSAKIKHPLQV

Specific function: Unknown

COG id: COG4195

COG function: function code R; Phage-related replication protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0714 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008585 [H]

Pfam domain/function: PF05908 DUF867 [H]

EC number: NA

Molecular weight: Translated: 30844; Mature: 30844

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAKVSLLHRLLQCLKQCVDCNTVNRFTAINIFVNILLISAVISFPYSAAAHGATQSGD
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
QYSSFEELERNEDPASYRITEKNARVPMLIMAIHGGGIEPGTSEIANEVSKNYSLYLFEG
HHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEC
LKSSGNTDLHITSTRFDEPAALAITASHQYVMSLHGYYSEDRDIKVGGTDRAKIRILVDE
CCCCCCCEEEEEECCCCCCCEEEEECCCCEEEHHHCCCCCCCEEEECCCCCEEEEEEEEC
LNRSGFAAEMLGTDDKYAGTHPNNIANKSLSGLSIQLEMSTGFRKSLFDRFTLKDRAATQ
CCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCC
NETFYRFTKLLTDFIHENYEEDGGDFPSAKIKHPLQV
CHHHHHHHHHHHHHHHCCHHHCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MKPAKVSLLHRLLQCLKQCVDCNTVNRFTAINIFVNILLISAVISFPYSAAAHGATQSGD
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
QYSSFEELERNEDPASYRITEKNARVPMLIMAIHGGGIEPGTSEIANEVSKNYSLYLFEG
HHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEC
LKSSGNTDLHITSTRFDEPAALAITASHQYVMSLHGYYSEDRDIKVGGTDRAKIRILVDE
CCCCCCCEEEEEECCCCCCCEEEEECCCCEEEHHHCCCCCCCEEEECCCCCEEEEEEEEC
LNRSGFAAEMLGTDDKYAGTHPNNIANKSLSGLSIQLEMSTGFRKSLFDRFTLKDRAATQ
CCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCC
NETFYRFTKLLTDFIHENYEEDGGDFPSAKIKHPLQV
CHHHHHHHHHHHHHHHCCHHHCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]