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The map label for this gene is ypaA [H]

Identifier: 52786186

GI number: 52786186

Start: 2381335

End: 2381913

Strand: Reverse

Name: ypaA [H]

Synonym: BLi02444

Alternate gene names: 52786186

Gene position: 2381913-2381335 (Counterclockwise)

Preceding gene: 52786188

Following gene: 52786184

Centisome position: 56.41

GC content: 48.53

Gene sequence:

>579_bases
ATGAAACACAACAAGGTGAGACGTCTCGTCTCTATCAGCATGCTGAGCAGCATCGCATTTATTTTAATGATGCTGAGCTT
TCCGATCCTGGGGGCATTCCCGTATTTAAAAATCGATTTCAGTGATATCCCGGCATTGCTCGCTGTTATTTTGTACGGTC
CGGGAGCCGGGATTGCCGTTGAAGCGATCAAAAACGTGCTGAATTACTTTATTGCAGGAAGCGCCTCGGGCGTTCCGATT
GATCAGGCGGCTAACTTCATTGCCGGAACATTGTTTATCCTGCCGGCAGCTGTACTGCTGAAAAAATCAAGTTCTGCCAA
AGGGTTTGTCACAGCTCTTTTCGCAGGGACGCTTGTGATGGCCGTTTCGATGAGCATTTTAAATTATCTGCTGTTTCTGC
CTGCCTACACTTGGTTTTTAAATGCTCCAGCGCTGACTGGAGAGGCGCTCAAGACAACAGTTCTGGCCGGAATCCTGCCT
TTTAATTTCATTAAAGGCATCGCTGTGGCCCTCGTGTCCACGCCGATTTTCCTTTCGCTGAAACCGCGGCTGAAGGAAAA
CGTCCGCATGGCCAAATAA

Upstream 100 bases:

>100_bases
ACAGCCCCGCTTTTTCAATAAAGCGGGTTTTTTGTTTAGGACAGGGGAAAGAACCATTCCTCTTTTCGTGAGATGTGATC
GAAAAGGAGAGAGTGACAAA

Downstream 100 bases:

>100_bases
ATAAACATGACAATATCGGGTGCATGTTCCCGGATATTGTCAGCTGCAGAAGAAGCCGGATGTCTTTAGCCGGCTTCTTT
TTGCTTGTTGGTAAAGCCGT

Product: YpaA

Products: NA

Alternate protein names: FMN permease [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKHNKVRRLVSISMLSSIAFILMMLSFPILGAFPYLKIDFSDIPALLAVILYGPGAGIAVEAIKNVLNYFIAGSASGVPI
DQAANFIAGTLFILPAAVLLKKSSSAKGFVTALFAGTLVMAVSMSILNYLLFLPAYTWFLNAPALTGEALKTTVLAGILP
FNFIKGIAVALVSTPIFLSLKPRLKENVRMAK

Sequences:

>Translated_192_residues
MKHNKVRRLVSISMLSSIAFILMMLSFPILGAFPYLKIDFSDIPALLAVILYGPGAGIAVEAIKNVLNYFIAGSASGVPI
DQAANFIAGTLFILPAAVLLKKSSSAKGFVTALFAGTLVMAVSMSILNYLLFLPAYTWFLNAPALTGEALKTTVLAGILP
FNFIKGIAVALVSTPIFLSLKPRLKENVRMAK
>Mature_192_residues
MKHNKVRRLVSISMLSSIAFILMMLSFPILGAFPYLKIDFSDIPALLAVILYGPGAGIAVEAIKNVLNYFIAGSASGVPI
DQAANFIAGTLFILPAAVLLKKSSSAKGFVTALFAGTLVMAVSMSILNYLLFLPAYTWFLNAPALTGEALKTTVLAGILP
FNFIKGIAVALVSTPIFLSLKPRLKENVRMAK

Specific function: Mediates riboflavin uptake, probably via a proton- symport mechanism. Can also transport roseoflavin [H]

COG id: COG3601

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009825 [H]

Pfam domain/function: PF07155 DUF1393 [H]

EC number: NA

Molecular weight: Translated: 20495; Mature: 20495

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHNKVRRLVSISMLSSIAFILMMLSFPILGAFPYLKIDFSDIPALLAVILYGPGAGIAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCHHH
EAIKNVLNYFIAGSASGVPIDQAANFIAGTLFILPAAVLLKKSSSAKGFVTALFAGTLVM
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AVSMSILNYLLFLPAYTWFLNAPALTGEALKTTVLAGILPFNFIKGIAVALVSTPIFLSL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KPRLKENVRMAK
CHHHHHCCCCCC
>Mature Secondary Structure
MKHNKVRRLVSISMLSSIAFILMMLSFPILGAFPYLKIDFSDIPALLAVILYGPGAGIAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCHHH
EAIKNVLNYFIAGSASGVPIDQAANFIAGTLFILPAAVLLKKSSSAKGFVTALFAGTLVM
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AVSMSILNYLLFLPAYTWFLNAPALTGEALKTTVLAGILPFNFIKGIAVALVSTPIFLSL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KPRLKENVRMAK
CHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]