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The map label for this gene is ypbB [H]

Identifier: 52786184

GI number: 52786184

Start: 2379611

End: 2380705

Strand: Reverse

Name: ypbB [H]

Synonym: BLi02442

Alternate gene names: 52786184

Gene position: 2380705-2379611 (Counterclockwise)

Preceding gene: 52786186

Following gene: 52786183

Centisome position: 56.38

GC content: 44.93

Gene sequence:

>1095_bases
ATGATCGAATGTTGCCGGAAGATTGCAGGTGATGATATGCCGGTTCATTTTTTTGACGCGATTGTGCTTGACATTCTGTC
ATCCATGAAGGGTGAGCGTTCTCCAAGCGCGGTCTATCATTTATTAAAAGGAAAAAGGTCGTCACAGACGATACAGGACG
CCGGTTTATTTGCCGTTTCAAAATACTTCGGCTTTTGTTCGGCTCTGTCGAGAGAGCAGGTGGCAGCCAGCGTTCAACGA
TTGAAGCAGGAGTCTTTGGTCAGAGAAAAAGCGGAAAGCGGCGCTTACACCGTCACCGAAAAAGGAGAAGCGGAACTTGC
CGGCTTTTTTGCCCTTTATCCGTGGCCCCGCCATTTTCACGGCGGCTATTATCAGGCGGCAGCCAAAGTGATGTGGGCAA
GGATGTCGCTTTTGATCCAAGTGCTCTCCAACAAGCTTTACCGCGAACGCGTGTATTTGCCGATCGTAAAAGATTATCAG
ATTCAGAACTGGGTTAAACAGTATTTAAGAAACCGGAATGCTGCTGAAACAGCGGCCCAGTTTCACCAAGAGCTGAAAGA
GAAGCTGTCTGTTTTAAATCATGATGAACAGGCCGCTATTTTTGTTCACTCCCTGACATCCAGAACAAAAGCGGGCTATA
CATTCAGACAGCTTTCCGAAAAAATGAACCTTGATGAGTGGTACATATATGCACTGTTTTGGGATGTTCTGCACCATTTT
ATTCAATCCGCCCAAAATGGTGAAAGTCCGCTTTTTCAAACGCTCATTCATGACATTCCTTTGAATGATGGTCTGACACA
ATCGACGAGAAAAACGCTCTTTCTTATAAAAGAAGGGTATACAATAGACCGGATCGCAAAAATTAGAAAGCTGAAATTGG
CGACGATCGAGGATCACATTGTGGAAATCGCCATTCATGATCCGTCTTTTTCCATCGATCAGTACGTGTCGAAAGAGGAA
CAGAAAATTATTGCCGATTATGCGATAGCGAACCAAACCAATAAAATCAGACAAATTAAAGAGGGACTCGGCGGCCGATA
CAGTTATTTTAAAATCCGCCTGGCCCTGTCGAAAACGGTGATCAGGAATGGATAA

Upstream 100 bases:

>100_bases
GAGAATGCTTATCACACAAGGGTTCTACTGCTAACATACCCCTTTTATATGAGTTTAAACGTCGATTTCTCCGCAAAATC
TGTTAAAATAAAAGGAAGAA

Downstream 100 bases:

>100_bases
ACTTCATCAGGCGCTCCGCAGGTATTTTGGTTATCATGCTTTTAAAAAAGGCCAGGAAACGATCATCAAAAGCGTGCTGG
AGGGACGGGACACGGTGGCG

Product: YpbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MIECCRKIAGDDMPVHFFDAIVLDILSSMKGERSPSAVYHLLKGKRSSQTIQDAGLFAVSKYFGFCSALSREQVAASVQR
LKQESLVREKAESGAYTVTEKGEAELAGFFALYPWPRHFHGGYYQAAAKVMWARMSLLIQVLSNKLYRERVYLPIVKDYQ
IQNWVKQYLRNRNAAETAAQFHQELKEKLSVLNHDEQAAIFVHSLTSRTKAGYTFRQLSEKMNLDEWYIYALFWDVLHHF
IQSAQNGESPLFQTLIHDIPLNDGLTQSTRKTLFLIKEGYTIDRIAKIRKLKLATIEDHIVEIAIHDPSFSIDQYVSKEE
QKIIADYAIANQTNKIRQIKEGLGGRYSYFKIRLALSKTVIRNG

Sequences:

>Translated_364_residues
MIECCRKIAGDDMPVHFFDAIVLDILSSMKGERSPSAVYHLLKGKRSSQTIQDAGLFAVSKYFGFCSALSREQVAASVQR
LKQESLVREKAESGAYTVTEKGEAELAGFFALYPWPRHFHGGYYQAAAKVMWARMSLLIQVLSNKLYRERVYLPIVKDYQ
IQNWVKQYLRNRNAAETAAQFHQELKEKLSVLNHDEQAAIFVHSLTSRTKAGYTFRQLSEKMNLDEWYIYALFWDVLHHF
IQSAQNGESPLFQTLIHDIPLNDGLTQSTRKTLFLIKEGYTIDRIAKIRKLKLATIEDHIVEIAIHDPSFSIDQYVSKEE
QKIIADYAIANQTNKIRQIKEGLGGRYSYFKIRLALSKTVIRNG
>Mature_364_residues
MIECCRKIAGDDMPVHFFDAIVLDILSSMKGERSPSAVYHLLKGKRSSQTIQDAGLFAVSKYFGFCSALSREQVAASVQR
LKQESLVREKAESGAYTVTEKGEAELAGFFALYPWPRHFHGGYYQAAAKVMWARMSLLIQVLSNKLYRERVYLPIVKDYQ
IQNWVKQYLRNRNAAETAAQFHQELKEKLSVLNHDEQAAIFVHSLTSRTKAGYTFRQLSEKMNLDEWYIYALFWDVLHHF
IQSAQNGESPLFQTLIHDIPLNDGLTQSTRKTLFLIKEGYTIDRIAKIRKLKLATIEDHIVEIAIHDPSFSIDQYVSKEE
QKIIADYAIANQTNKIRQIKEGLGGRYSYFKIRLALSKTVIRNG

Specific function: Unknown

COG id: COG4955

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008308 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41813; Mature: 41813

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCC
>Mature Secondary Structure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HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]