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The map label for this gene is ypmB [H]

Identifier: 52786117

GI number: 52786117

Start: 2319445

End: 2319930

Strand: Reverse

Name: ypmB [H]

Synonym: BLi02373

Alternate gene names: 52786117

Gene position: 2319930-2319445 (Counterclockwise)

Preceding gene: 52786118

Following gene: 52786116

Centisome position: 54.94

GC content: 43.62

Gene sequence:

>486_bases
ATGGGCAAAAAAACATTAATTTTCATACTGATATTTGGTATTATCTTTTTAACAGCACTTCTTGCGGGAGCGAATGTCTA
CCGTACGGCAATGGATCAGAAAGAAAACGGCCACGAGCAGGCTGCCGAAACAGCCAGGCAGGAAGCCGGCTTAAAACAAG
TTGACAGCGTGGAGACGTTTGTCGGTAAAGAAAAGCAGTACATTGTTACAGGGGCAGACAAAAAAGGCGACAAAATGTAT
GTTTGGGTGCCTGCTGACAAAAAGCAGAAAACGCTTTACAAAAAAGCATCAGCCGGCATTACCGGCCGCCAGGCTGCAAA
AGCTGTTCAGGATGAGGGCCTGATGTCTGAGCTTAAAGAGGTGCACCTTGCAAGGGAAGGCAATGTTCTATTGTGGGAAG
TTACATACTTAAATAAAGATGGGCAGTACAGTTTAAGCTATGTGGACTTTATAAACGGAAAAATTCACAAAAATATTACG
CCTTAG

Upstream 100 bases:

>100_bases
CCGTACGCTCAAACGCGATGATCTCATGTTCGGCCTCGCTCTCGATGAAGAAGACCAAAAACAGGCCATTTTTACGATTT
ATCGTACTTAGGAGCAGAAA

Downstream 100 bases:

>100_bases
ACGAAACAGGGGGAAATCGAGTTGAATCTAGCTAAAAGAGTATCAGCGTTAACACCATCTGCAACATTGGCAATCACTGC
AAAAGCAAAAGAATTAAAAG

Product: YpmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MGKKTLIFILIFGIIFLTALLAGANVYRTAMDQKENGHEQAAETARQEAGLKQVDSVETFVGKEKQYIVTGADKKGDKMY
VWVPADKKQKTLYKKASAGITGRQAAKAVQDEGLMSELKEVHLAREGNVLLWEVTYLNKDGQYSLSYVDFINGKIHKNIT
P

Sequences:

>Translated_161_residues
MGKKTLIFILIFGIIFLTALLAGANVYRTAMDQKENGHEQAAETARQEAGLKQVDSVETFVGKEKQYIVTGADKKGDKMY
VWVPADKKQKTLYKKASAGITGRQAAKAVQDEGLMSELKEVHLAREGNVLLWEVTYLNKDGQYSLSYVDFINGKIHKNIT
P
>Mature_160_residues
GKKTLIFILIFGIIFLTALLAGANVYRTAMDQKENGHEQAAETARQEAGLKQVDSVETFVGKEKQYIVTGADKKGDKMYV
WVPADKKQKTLYKKASAGITGRQAAKAVQDEGLMSELKEVHLAREGNVLLWEVTYLNKDGQYSLSYVDFINGKIHKNITP

Specific function: Unknown

COG id: COG5353

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015801
- InterPro:   IPR005075 [H]

Pfam domain/function: PF03413 PepSY [H]

EC number: NA

Molecular weight: Translated: 17926; Mature: 17795

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKTLIFILIFGIIFLTALLAGANVYRTAMDQKENGHEQAAETARQEAGLKQVDSVETF
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH
VGKEKQYIVTGADKKGDKMYVWVPADKKQKTLYKKASAGITGRQAAKAVQDEGLMSELKE
HCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VHLAREGNVLLWEVTYLNKDGQYSLSYVDFINGKIHKNITP
HHHCCCCCEEEEEEEEECCCCCEEEHHEEHHCCEECCCCCC
>Mature Secondary Structure 
GKKTLIFILIFGIIFLTALLAGANVYRTAMDQKENGHEQAAETARQEAGLKQVDSVETF
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH
VGKEKQYIVTGADKKGDKMYVWVPADKKQKTLYKKASAGITGRQAAKAVQDEGLMSELKE
HCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VHLAREGNVLLWEVTYLNKDGQYSLSYVDFINGKIHKNITP
HHHCCCCCEEEEEEEEECCCCCEEEHHEEHHCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]