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The map label for this gene is ypsA

Identifier: 52786099

GI number: 52786099

Start: 2302627

End: 2303178

Strand: Reverse

Name: ypsA

Synonym: BLi02355

Alternate gene names: NA

Gene position: 2303178-2302627 (Counterclockwise)

Preceding gene: 52786100

Following gene: 52786098

Centisome position: 54.54

GC content: 47.28

Gene sequence:

>552_bases
ATGAAAGTATTGGCCGTTACAGGGTACAAGCCGTTTGAACTCGGGATTTTCAAACACGATGACAAGGCCCTGTTCTACAT
AAAAAAAGCGCTTGAAAACCGGATGATCGCTCTCCTTGAGGAAGGCCTGGAATGGGTCCTTATCTCGGGCCAGCTCGGGA
CTGAACTATGGGCGGCGGAAGTCGCGTTTTCGCTGCAGGAAGAATTTCCCGACTTGAAAGTGGCGGTCATCACTCCGTTT
TTGGAACAGGAAAAGAAGTGGAGCGAGAAAAATCAAGAGCAGTATGAAGCCGTGCTCGCAGCCAGCGATTTCACTGAAAG
CTTGACACACAGGCCGTACGAAAGCCCGGTGCAATTCAAACAAAAAAACCGGTTCTTCATCGAAAAGGCGGATGGCTTAT
TGATTCTGTACGATGAAGAAATCGAAGGCTCGCCTGTGTATATGCTGAATGAAGCAAAAAAGGCTCAGGAAAAACGCGAT
TTTCCGATCTACACGATTACGATGGATGACTTGAGAGTCACTGTTGAAGAATGCAGCTTTTACGAAGAGTAA

Upstream 100 bases:

>100_bases
GTTTTGTCAGGATGAACGAGCGCCGGATTGAACGTGACTAACAGAATATTTTTAAAAAAATGGGGCGGAATACGGCCCCA
TTTTTTAGCAGGTGATCATA

Downstream 100 bases:

>100_bases
AAAGTGCAAGAGAAAATTTGACATTGCACACGTTTTCTGAAAAAATATAAGATGATGATTCACGATATGAGGTGAAAAAG
ATGCTTGCTGATAAAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKVLAVTGYKPFELGIFKHDDKALFYIKKALENRMIALLEEGLEWVLISGQLGTELWAAEVAFSLQEEFPDLKVAVITPF
LEQEKKWSEKNQEQYEAVLAASDFTESLTHRPYESPVQFKQKNRFFIEKADGLLILYDEEIEGSPVYMLNEAKKAQEKRD
FPIYTITMDDLRVTVEECSFYEE

Sequences:

>Translated_183_residues
MKVLAVTGYKPFELGIFKHDDKALFYIKKALENRMIALLEEGLEWVLISGQLGTELWAAEVAFSLQEEFPDLKVAVITPF
LEQEKKWSEKNQEQYEAVLAASDFTESLTHRPYESPVQFKQKNRFFIEKADGLLILYDEEIEGSPVYMLNEAKKAQEKRD
FPIYTITMDDLRVTVEECSFYEE
>Mature_183_residues
MKVLAVTGYKPFELGIFKHDDKALFYIKKALENRMIALLEEGLEWVLISGQLGTELWAAEVAFSLQEEFPDLKVAVITPF
LEQEKKWSEKNQEQYEAVLAASDFTESLTHRPYESPVQFKQKNRFFIEKADGLLILYDEEIEGSPVYMLNEAKKAQEKRD
FPIYTITMDDLRVTVEECSFYEE

Specific function: Unknown

COG id: COG4474

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0398 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2355_BACLD (Q65I79)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079517.1
- RefSeq:   YP_091928.1
- ProteinModelPortal:   Q65I79
- SMR:   Q65I79
- STRING:   Q65I79
- EnsemblBacteria:   EBBACT00000057952
- EnsemblBacteria:   EBBACT00000061906
- GeneID:   3029404
- GeneID:   3101275
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02355
- KEGG:   bli:BL05236
- NMPDR:   fig|279010.5.peg.205
- eggNOG:   COG4474
- GeneTree:   EBGT00050000001030
- HOGENOM:   HBG338123
- OMA:   LWVTGYR
- ProtClustDB:   PRK13660
- BioCyc:   BLIC279010-1:BLI02355-MONOMER
- BioCyc:   BLIC279010:BL05236-MONOMER
- HAMAP:   MF_01575
- InterPro:   IPR010697
- PIRSF:   PIRSF021290

Pfam domain/function: PF06908 DUF1273

EC number: NA

Molecular weight: Translated: 21322; Mature: 21322

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLAVTGYKPFELGIFKHDDKALFYIKKALENRMIALLEEGLEWVLISGQLGTELWAAE
CEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
VAFSLQEEFPDLKVAVITPFLEQEKKWSEKNQEQYEAVLAASDFTESLTHRPYESPVQFK
HHHHHHHHCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
QKNRFFIEKADGLLILYDEEIEGSPVYMLNEAKKAQEKRDFPIYTITMDDLRVTVEECSF
HCCEEEEEECCCEEEEECCCCCCCCEEEECCHHHHHHHCCCCEEEEEHHHHEEEHHHHCC
YEE
CCC
>Mature Secondary Structure
MKVLAVTGYKPFELGIFKHDDKALFYIKKALENRMIALLEEGLEWVLISGQLGTELWAAE
CEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
VAFSLQEEFPDLKVAVITPFLEQEKKWSEKNQEQYEAVLAASDFTESLTHRPYESPVQFK
HHHHHHHHCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
QKNRFFIEKADGLLILYDEEIEGSPVYMLNEAKKAQEKRDFPIYTITMDDLRVTVEECSF
HCCEEEEEECCCEEEEECCCCCCCCEEEECCHHHHHHHCCCCEEEEEHHHHEEEHHHHCC
YEE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA