| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is ilvD [H]
Identifier: 52786068
GI number: 52786068
Start: 2273303
End: 2274979
Strand: Reverse
Name: ilvD [H]
Synonym: BLi02324
Alternate gene names: 52786068
Gene position: 2274979-2273303 (Counterclockwise)
Preceding gene: 52786069
Following gene: 52786067
Centisome position: 53.88
GC content: 52.59
Gene sequence:
>1677_bases ATGACAGGTTTACGCAGTGACATGATTACAAAAGGGATCGACAGAGCGCCGCACCGCAGTTTGCTGCGCGCGGCTGGGGT AAAAGAAGAGGACTTCGGCAAACCGTTTATTGCCGTTTGCAACTCATACATCGATATCGTACCGGGTCATGTCCATTTGC AGGAGTTTGGAAAAATCGTCAAAGAGGCGATCAGAGAGGCCGGCGGTGTTCCGTTTGAATTTAATACAATCGGGGTCGAC GACGGAATTGCGATGGGGCACATCGGAATGAGGTATTCTCTCCCGAGCCGCGAAATCATCGCAGATTCAGTGGAAACGGT TGTATCGGCGCACTGGTTTGACGGAATGGTATGTATTCCAAACTGTGATAAAATCACACCGGGCATGATCATGGCGGCAA TGCGGATCAACATTCCGACCGTGTTTGTCAGCGGGGGGCCGATGGAAGCGGGAAGAACGAGCGACGGACGAAAAATCTCG CTTTCCTCTGTATTTGAAGGCGTTGGCGCTTATCAATCAGGCAAAATCGATGAGAAAGGACTCGAGGAGCTTGAACAGTT CGGCTGTCCGACTTGCGGATCATGCTCGGGCATGTTTACGGCGAACTCGATGAACTGTCTTTCTGAAGCTCTTGGCATCG CCATGCCGGGCAACGGCACCATTTTGGCGACATCGCCCGACCGCAGGGAATTTGCCAAACAGTCGGCCCGCCAGCTGATG GAGCTGATCAAGTCGGATATCAAACCGCGCGACATCGTGACCGAAAAAGCGATCGACAACGCGTTCGCTTTAGACATGGC GCTCGGCGGATCAACGAATACGATCCTTCATACGCTTGCGATCGCCAATGAAGCGGGTGTAGACTATTCGCTTGAACGGA TCAATGAGGTAGCGGCAAGGGTTCCGCATTTATCGAAGCTTGCACCGGCTTCCGATGTGTTTATTGAAGATTTGCATGAA GCAGGAGGCGTATCGGCAGTCTTAAACGAGCTGTCGAAAAAAGAAGGCGCGCTTCACTTGGATACGCTGACTGTAACGGG GAAAACGCTTGGCGAAAATATTGCCGGACGCGAAGTGAAAGATTACGAGGTCATTCATCCGATCGATCAGCCGTTTTCAG AGCAAGGCGGACTCGCCGTCCTGTTCGGCAACCTGGCTCCTGACGGTGCGATCATTAAAACGGGCGGCGTCCAAGACGGG ATTACCCGCCATGAAGGACCTGCGGTTGTCTTTGATTCACAGGAAGAAGCGCTTGACGGCATCATCAACCGTAAAGTAAA AGCGGGAGATGTCGTCATCATCCGCTATGAAGGCCCTAAAGGCGGACCGGGAATGCCTGAAATGCTTGCGCCGACTTCAC AGATCGTCGGAATGGGCCTCGGCCCGAAAGTCGCCTTGATTACCGACGGCCGCTTTTCAGGAGCCTCCCGCGGTCTTTCG ATCGGCCACGTTTCACCGGAAGCAGCCGAAGGCGGCCCGCTTGCTTTCGTAGAAAACGGCGACCATATCGTTGTCGATAT CGAAAAGCGGATTTTAAACATCGAAATCTCCGATGAGGAATGGGAAAAAAGAAAAGCAAACTGGCCCGGCTTTGAACCGA AAGTGAAAACGGGCTATCTCGCCAGGTATTCAAAGCTTGTGACATCTGCCAATACCGGCGGCATTATGAAAATCTAG
Upstream 100 bases:
>100_bases ATCTTGCGGATCAGTCCGGCAAGCGGTTAACAGACAATTTTTAAAACTGAATATTCAGAATATATAGAATGTAAATACGA AGATGTTTAGGAGGATCACG
Downstream 100 bases:
>100_bases CGGTTTTTTCGCCCGGCGTTTGAAATTCAGCCCCCTCTGTAGTATCCTTGAAAACATCAGTAGTCAAGGTTTATAGAGGG GGCTTTTTAATATGTCAACA
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MTGLRSDMITKGIDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGHVHLQEFGKIVKEAIREAGGVPFEFNTIGVD DGIAMGHIGMRYSLPSREIIADSVETVVSAHWFDGMVCIPNCDKITPGMIMAAMRINIPTVFVSGGPMEAGRTSDGRKIS LSSVFEGVGAYQSGKIDEKGLEELEQFGCPTCGSCSGMFTANSMNCLSEALGIAMPGNGTILATSPDRREFAKQSARQLM ELIKSDIKPRDIVTEKAIDNAFALDMALGGSTNTILHTLAIANEAGVDYSLERINEVAARVPHLSKLAPASDVFIEDLHE AGGVSAVLNELSKKEGALHLDTLTVTGKTLGENIAGREVKDYEVIHPIDQPFSEQGGLAVLFGNLAPDGAIIKTGGVQDG ITRHEGPAVVFDSQEEALDGIINRKVKAGDVVIIRYEGPKGGPGMPEMLAPTSQIVGMGLGPKVALITDGRFSGASRGLS IGHVSPEAAEGGPLAFVENGDHIVVDIEKRILNIEISDEEWEKRKANWPGFEPKVKTGYLARYSKLVTSANTGGIMKI
Sequences:
>Translated_558_residues MTGLRSDMITKGIDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGHVHLQEFGKIVKEAIREAGGVPFEFNTIGVD DGIAMGHIGMRYSLPSREIIADSVETVVSAHWFDGMVCIPNCDKITPGMIMAAMRINIPTVFVSGGPMEAGRTSDGRKIS LSSVFEGVGAYQSGKIDEKGLEELEQFGCPTCGSCSGMFTANSMNCLSEALGIAMPGNGTILATSPDRREFAKQSARQLM ELIKSDIKPRDIVTEKAIDNAFALDMALGGSTNTILHTLAIANEAGVDYSLERINEVAARVPHLSKLAPASDVFIEDLHE AGGVSAVLNELSKKEGALHLDTLTVTGKTLGENIAGREVKDYEVIHPIDQPFSEQGGLAVLFGNLAPDGAIIKTGGVQDG ITRHEGPAVVFDSQEEALDGIINRKVKAGDVVIIRYEGPKGGPGMPEMLAPTSQIVGMGLGPKVALITDGRFSGASRGLS IGHVSPEAAEGGPLAFVENGDHIVVDIEKRILNIEISDEEWEKRKANWPGFEPKVKTGYLARYSKLVTSANTGGIMKI >Mature_557_residues TGLRSDMITKGIDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGHVHLQEFGKIVKEAIREAGGVPFEFNTIGVDD GIAMGHIGMRYSLPSREIIADSVETVVSAHWFDGMVCIPNCDKITPGMIMAAMRINIPTVFVSGGPMEAGRTSDGRKISL SSVFEGVGAYQSGKIDEKGLEELEQFGCPTCGSCSGMFTANSMNCLSEALGIAMPGNGTILATSPDRREFAKQSARQLME LIKSDIKPRDIVTEKAIDNAFALDMALGGSTNTILHTLAIANEAGVDYSLERINEVAARVPHLSKLAPASDVFIEDLHEA GGVSAVLNELSKKEGALHLDTLTVTGKTLGENIAGREVKDYEVIHPIDQPFSEQGGLAVLFGNLAPDGAIIKTGGVQDGI TRHEGPAVVFDSQEEALDGIINRKVKAGDVVIIRYEGPKGGPGMPEMLAPTSQIVGMGLGPKVALITDGRFSGASRGLSI GHVSPEAAEGGPLAFVENGDHIVVDIEKRILNIEISDEEWEKRKANWPGFEPKVKTGYLARYSKLVTSANTGGIMKI
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=609, Percent_Identity=47.4548440065681, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI1788157, Length=558, Percent_Identity=33.3333333333333, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI2367371, Length=505, Percent_Identity=33.8613861386139, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1786464, Length=504, Percent_Identity=32.3412698412698, Blast_Score=203, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6322476, Length=560, Percent_Identity=39.1071428571429, Blast_Score=403, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 59462; Mature: 59331
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLRSDMITKGIDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGHVHLQEFGKIV CCCCHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHH KEAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADSVETVVSAHWFDGMVCIP HHHHHHHCCCCEEEEEECCCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEECC NCDKITPGMIMAAMRINIPTVFVSGGPMEAGRTSDGRKISLSSVFEGVGAYQSGKIDEKG CCCCCCHHHHHHHEEECCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHH LEELEQFGCPTCGSCSGMFTANSMNCLSEALGIAMPGNGTILATSPDRREFAKQSARQLM HHHHHHCCCCCCCCCCCCEECCHHHHHHHHHCEEECCCCEEEECCCCHHHHHHHHHHHHH ELIKSDIKPRDIVTEKAIDNAFALDMALGGSTNTILHTLAIANEAGVDYSLERINEVAAR HHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH VPHLSKLAPASDVFIEDLHEAGGVSAVLNELSKKEGALHLDTLTVTGKTLGENIAGREVK CCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECHHHCCCCCCCCCC DYEVIHPIDQPFSEQGGLAVLFGNLAPDGAIIKTGGVQDGITRHEGPAVVFDSQEEALDG CCEEECCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEECCHHHHHHH IINRKVKAGDVVIIRYEGPKGGPGMPEMLAPTSQIVGMGLGPKVALITDGRFSGASRGLS HHHCCEECCCEEEEEECCCCCCCCCCHHHCCHHHHHCCCCCCEEEEEECCCCCCCCCCCE IGHVSPEAAEGGPLAFVENGDHIVVDIEKRILNIEISDEEWEKRKANWPGFEPKVKTGYL ECCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCHHHHHHCCCCCCCCCCCCHHHH ARYSKLVTSANTGGIMKI HHHHHHHHCCCCCCEEEC >Mature Secondary Structure TGLRSDMITKGIDRAPHRSLLRAAGVKEEDFGKPFIAVCNSYIDIVPGHVHLQEFGKIV CCCHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHH KEAIREAGGVPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADSVETVVSAHWFDGMVCIP HHHHHHHCCCCEEEEEECCCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEECC NCDKITPGMIMAAMRINIPTVFVSGGPMEAGRTSDGRKISLSSVFEGVGAYQSGKIDEKG CCCCCCHHHHHHHEEECCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCHHH LEELEQFGCPTCGSCSGMFTANSMNCLSEALGIAMPGNGTILATSPDRREFAKQSARQLM HHHHHHCCCCCCCCCCCCEECCHHHHHHHHHCEEECCCCEEEECCCCHHHHHHHHHHHHH ELIKSDIKPRDIVTEKAIDNAFALDMALGGSTNTILHTLAIANEAGVDYSLERINEVAAR HHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH VPHLSKLAPASDVFIEDLHEAGGVSAVLNELSKKEGALHLDTLTVTGKTLGENIAGREVK CCCHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECHHHCCCCCCCCCC DYEVIHPIDQPFSEQGGLAVLFGNLAPDGAIIKTGGVQDGITRHEGPAVVFDSQEEALDG CCEEECCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEECCHHHHHHH IINRKVKAGDVVIIRYEGPKGGPGMPEMLAPTSQIVGMGLGPKVALITDGRFSGASRGLS HHHCCEECCCEEEEEECCCCCCCCCCHHHCCHHHHHCCCCCCEEEEEECCCCCCCCCCCE IGHVSPEAAEGGPLAFVENGDHIVVDIEKRILNIEISDEEWEKRKANWPGFEPKVKTGYL ECCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCHHHHHHCCCCCCCCCCCCHHHH ARYSKLVTSANTGGIMKI HHHHHHHHCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA