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The map label for this gene is ypgR [H]

Identifier: 52786069

GI number: 52786069

Start: 2275309

End: 2276445

Strand: Reverse

Name: ypgR [H]

Synonym: BLi02325

Alternate gene names: 52786069

Gene position: 2276445-2275309 (Counterclockwise)

Preceding gene: 52786070

Following gene: 52786068

Centisome position: 53.91

GC content: 50.04

Gene sequence:

>1137_bases
ATGAAAATTAAATCGATAGAACCGACACCGAGTCCGAATACAATGAAGGTGATTTTGACCGAGGAACTGCCGGGTGGAAA
AAGCAATAATTATAAAAAGGATCATGCGGAAGGCGCACCTCCCGTCATCCAGGAAGTTTTAAACATAGACGGAGTAAAAG
GCGTCTATCATGTGGCCGATTTTATCGCTGTCGAGCGCAATGCGAGATTTGATTGGAAAGACATCCTTCCTAAGGTGCGC
GCTGCATTCGGAATGGATGAAGCCGAAGAGGCGGAGGGCCGTTCCGAAGAAAAAGAATCGTTCGGCGAGGTTAAAGTTTT
CGTGCAAATGTTCAGCGGAATACCGATGCAGGTGAAATTGACCGACGGCGAGCGCGAGGAGCGCTTCGGCCTTCCAGAAC
GTTTCCAGGAAGCGATCTTGAAGCTTAAAACCGCGTCTTCCAACGTCGTGCTCGAACGGTCTTGGAAAGAGCAAGGCGTC
AGATTCGGCGATTTTTCAGAAATCGGCCGCGAAGTAACGGAAGAGCTGGAGGCGGCTTACGATGAAGAGCGCCTGCGGAA
GCTGACGGAATCAGCTGCATCAAGCGATGCTGAGGCTAAACGTACGGCTGTGCAGCGAAAGTCTTACCGGGTAACGCTTG
AAATGATGGATGAGGAAGATTGGCAAAAACGCTATGCGCATCTTGAACAAATGGATCCTACTGAAGAGGATATTCCAGTA
CTCGAAAAAGCGCTCAATGACCCGAAAACATCGATCAGAAGGCTTGCTGTCGTTTATTTGGGCATGATCGAAACGCCTGC
GGTGCTTCCCCTTTTATATAAAGCGCTCGAAGACAAAACCATCACGGTCAGAAGAACGGCCGGCGATTGTCTGTCAGACA
TCGGCAACCCGGAAGCGATTCCGGCGATGATCAAAGCGCTGAAGGATCCGAGCAAGCTTGTGCGCTGGAGAGCCGCCATG
TTTCTGTACGAAGTCGGCGATGAAAGCGCGCTTCCCGCTTTAAAAGAAGCTGAAAACGATCCGGAATTTGAAGTCAGCCT
TCAGATCAAAATGGCGATCGAACGGATCGAATACGGTGAAGAAGCAAAAGGCTCCGTATGGAAGCAAATGACGGAAAGCC
GCAAAAAAGACAGCTGA

Upstream 100 bases:

>100_bases
GGAAAATGAATGCGCCTTCTCTAGAGAAAGCCGCCTTGATAGATCAGGGCTGGGGGTTATGGTAGAATAAGACCGGATCT
TTAAACAGAGGGGGACAATG

Downstream 100 bases:

>100_bases
CAAAGACGCTGGAAACAGCGTCTTTTTTTATGCTTCAAAAGCGGCGATCGATCCGGGAATTCTGAAAAAAGTCACGCGTC
TTGTAATAAAATATCACTTT

Product: YpgR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKIKSIEPTPSPNTMKVILTEELPGGKSNNYKKDHAEGAPPVIQEVLNIDGVKGVYHVADFIAVERNARFDWKDILPKVR
AAFGMDEAEEAEGRSEEKESFGEVKVFVQMFSGIPMQVKLTDGEREERFGLPERFQEAILKLKTASSNVVLERSWKEQGV
RFGDFSEIGREVTEELEAAYDEERLRKLTESAASSDAEAKRTAVQRKSYRVTLEMMDEEDWQKRYAHLEQMDPTEEDIPV
LEKALNDPKTSIRRLAVVYLGMIETPAVLPLLYKALEDKTITVRRTAGDCLSDIGNPEAIPAMIKALKDPSKLVRWRAAM
FLYEVGDESALPALKEAENDPEFEVSLQIKMAIERIEYGEEAKGSVWKQMTESRKKDS

Sequences:

>Translated_378_residues
MKIKSIEPTPSPNTMKVILTEELPGGKSNNYKKDHAEGAPPVIQEVLNIDGVKGVYHVADFIAVERNARFDWKDILPKVR
AAFGMDEAEEAEGRSEEKESFGEVKVFVQMFSGIPMQVKLTDGEREERFGLPERFQEAILKLKTASSNVVLERSWKEQGV
RFGDFSEIGREVTEELEAAYDEERLRKLTESAASSDAEAKRTAVQRKSYRVTLEMMDEEDWQKRYAHLEQMDPTEEDIPV
LEKALNDPKTSIRRLAVVYLGMIETPAVLPLLYKALEDKTITVRRTAGDCLSDIGNPEAIPAMIKALKDPSKLVRWRAAM
FLYEVGDESALPALKEAENDPEFEVSLQIKMAIERIEYGEEAKGSVWKQMTESRKKDS
>Mature_378_residues
MKIKSIEPTPSPNTMKVILTEELPGGKSNNYKKDHAEGAPPVIQEVLNIDGVKGVYHVADFIAVERNARFDWKDILPKVR
AAFGMDEAEEAEGRSEEKESFGEVKVFVQMFSGIPMQVKLTDGEREERFGLPERFQEAILKLKTASSNVVLERSWKEQGV
RFGDFSEIGREVTEELEAAYDEERLRKLTESAASSDAEAKRTAVQRKSYRVTLEMMDEEDWQKRYAHLEQMDPTEEDIPV
LEKALNDPKTSIRRLAVVYLGMIETPAVLPLLYKALEDKTITVRRTAGDCLSDIGNPEAIPAMIKALKDPSKLVRWRAAM
FLYEVGDESALPALKEAENDPEFEVSLQIKMAIERIEYGEEAKGSVWKQMTESRKKDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR014824
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS; PF08712 Nfu_N [H]

EC number: NA

Molecular weight: Translated: 42837; Mature: 42837

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSIEPTPSPNTMKVILTEELPGGKSNNYKKDHAEGAPPVIQEVLNIDGVKGVYHVAD
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
FIAVERNARFDWKDILPKVRAAFGMDEAEEAEGRSEEKESFGEVKVFVQMFSGIPMQVKL
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
TDGEREERFGLPERFQEAILKLKTASSNVVLERSWKEQGVRFGDFSEIGREVTEELEAAY
CCCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHH
DEERLRKLTESAASSDAEAKRTAVQRKSYRVTLEMMDEEDWQKRYAHLEQMDPTEEDIPV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCHHHH
LEKALNDPKTSIRRLAVVYLGMIETPAVLPLLYKALEDKTITVRRTAGDCLSDIGNPEAI
HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCHHH
PAMIKALKDPSKLVRWRAAMFLYEVGDESALPALKEAENDPEFEVSLQIKMAIERIEYGE
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHCCC
EAKGSVWKQMTESRKKDS
CCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIKSIEPTPSPNTMKVILTEELPGGKSNNYKKDHAEGAPPVIQEVLNIDGVKGVYHVAD
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
FIAVERNARFDWKDILPKVRAAFGMDEAEEAEGRSEEKESFGEVKVFVQMFSGIPMQVKL
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
TDGEREERFGLPERFQEAILKLKTASSNVVLERSWKEQGVRFGDFSEIGREVTEELEAAY
CCCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHH
DEERLRKLTESAASSDAEAKRTAVQRKSYRVTLEMMDEEDWQKRYAHLEQMDPTEEDIPV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCHHHH
LEKALNDPKTSIRRLAVVYLGMIETPAVLPLLYKALEDKTITVRRTAGDCLSDIGNPEAI
HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCHHH
PAMIKALKDPSKLVRWRAAMFLYEVGDESALPALKEAENDPEFEVSLQIKMAIERIEYGE
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHCCC
EAKGSVWKQMTESRKKDS
CCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]