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The map label for this gene is yndE [H]

Identifier: 52785926

GI number: 52785926

Start: 2137787

End: 2138884

Strand: Reverse

Name: yndE [H]

Synonym: BLi02177

Alternate gene names: 52785926

Gene position: 2138884-2137787 (Counterclockwise)

Preceding gene: 52785927

Following gene: 52785924

Centisome position: 50.65

GC content: 45.99

Gene sequence:

>1098_bases
ATGATCCGTTCCGAAGATAAAATCACGACTTCTCAGGCAATCGTTGTCTTGGTCAGTTATATTATGGCGGCCGGGATTCT
CACCCTGCCAAGAACCGCTGTAGAAGAAGCCGGTACGCCGGATGTATGGATTTCCGTCCTATTAGGCGGACTTGTCACAA
CGGCAGCCGGAGTGGTTATGACAAAGTTAAGCCAGCATTATCCCGGGCAAACATTTTTTCAATACGGGGGAGACATTGTC
GGAAAGTGGCTCAGTATTGTGATCAGCCTGCTTTTCATTGAGCATTTTGTAGCGATTGCTGCTTTTGAAGCAAGAATTCT
GGCGGAGGTGATCACCTTTTTTTTGCTGCAGCAAACGCCGATTTGGGCGATCGTCATGTCGATGATGTGGATCGGATTCT
ATTCAATAAAAGACGGAATGGGGTCGCTTGCCCGTTTGTTTGAAATCATCTTTCCGATTACAATTCTTTTCTTTTTAACC
GTGGTATTTATGAGCTTTGGCATATTTGAACTGGATAACCTGCGGCCTGTCTTAGGGAAAGGCATCATGCCGGCATTAAA
GGGGACAAAAGCAACAACGCTTTCGTTTATCAGCGCAGAAGTGATGGTATTCCTTTTGGCGTTTATGAAAAAGCCGAAAG
ATGGTATCAAAGTCGTTGTCATGGGAATCGGCATCGCAATGCTCTTTTATCTAACAACGATCGTATTTGTGATCGGAGGG
CTGTCAGTTGACGGGGTGACAGCGATGACATGGCCGGCGCTTGACCTCATCCGCAGTTTTGAAATGCCCGGCTTAATATT
TGAACGTTTTGAATCGCTGCTCCTTGTCATCTGGATTATGCAGCTGTTTGCGACTTTTTCCGTCTCATATTACGCTGCAT
CCCTGGGGCTCTCGCAAATTTTCAAGAAAAAGAGCAGACCGATCATGTTCGGTCTGCTCCCGGTGATGTATTTGCTCGCG
ATGACGCCAAAAAACATTGATGATGTATTTTCTCTCGGCGACATGATCGGCTATATTGCGGCCGTTTTATTCGGCATTGT
GCCGATTCCGCTTTTATTGGTTTCGAAAATGAGAAAAAAGAAGGCAGTGCAAAGCTAG

Upstream 100 bases:

>100_bases
ACCGATTACATTTCATGTTCAAATCGCGATTAAAGAATACGGAACTGTTGGGGATCAGTAACAGAAGAACTTCTAATCAC
GAAAGGCGGAGAAACGCGCA

Downstream 100 bases:

>100_bases
AGGTTCAGCCGGCTTTGTTCACTTCCTTTTTTGCGTTCACTTTCACCCTGTCATTCGGCATGAAGAACACCAGTAAAAAG
GCGGCCGCTGCTGGGGAAAT

Product: YndE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MIRSEDKITTSQAIVVLVSYIMAAGILTLPRTAVEEAGTPDVWISVLLGGLVTTAAGVVMTKLSQHYPGQTFFQYGGDIV
GKWLSIVISLLFIEHFVAIAAFEARILAEVITFFLLQQTPIWAIVMSMMWIGFYSIKDGMGSLARLFEIIFPITILFFLT
VVFMSFGIFELDNLRPVLGKGIMPALKGTKATTLSFISAEVMVFLLAFMKKPKDGIKVVVMGIGIAMLFYLTTIVFVIGG
LSVDGVTAMTWPALDLIRSFEMPGLIFERFESLLLVIWIMQLFATFSVSYYAASLGLSQIFKKKSRPIMFGLLPVMYLLA
MTPKNIDDVFSLGDMIGYIAAVLFGIVPIPLLLVSKMRKKKAVQS

Sequences:

>Translated_365_residues
MIRSEDKITTSQAIVVLVSYIMAAGILTLPRTAVEEAGTPDVWISVLLGGLVTTAAGVVMTKLSQHYPGQTFFQYGGDIV
GKWLSIVISLLFIEHFVAIAAFEARILAEVITFFLLQQTPIWAIVMSMMWIGFYSIKDGMGSLARLFEIIFPITILFFLT
VVFMSFGIFELDNLRPVLGKGIMPALKGTKATTLSFISAEVMVFLLAFMKKPKDGIKVVVMGIGIAMLFYLTTIVFVIGG
LSVDGVTAMTWPALDLIRSFEMPGLIFERFESLLLVIWIMQLFATFSVSYYAASLGLSQIFKKKSRPIMFGLLPVMYLLA
MTPKNIDDVFSLGDMIGYIAAVLFGIVPIPLLLVSKMRKKKAVQS
>Mature_365_residues
MIRSEDKITTSQAIVVLVSYIMAAGILTLPRTAVEEAGTPDVWISVLLGGLVTTAAGVVMTKLSQHYPGQTFFQYGGDIV
GKWLSIVISLLFIEHFVAIAAFEARILAEVITFFLLQQTPIWAIVMSMMWIGFYSIKDGMGSLARLFEIIFPITILFFLT
VVFMSFGIFELDNLRPVLGKGIMPALKGTKATTLSFISAEVMVFLLAFMKKPKDGIKVVVMGIGIAMLFYLTTIVFVIGG
LSVDGVTAMTWPALDLIRSFEMPGLIFERFESLLLVIWIMQLFATFSVSYYAASLGLSQIFKKKSRPIMFGLLPVMYLLA
MTPKNIDDVFSLGDMIGYIAAVLFGIVPIPLLLVSKMRKKKAVQS

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40287; Mature: 40287

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSEDKITTSQAIVVLVSYIMAAGILTLPRTAVEEAGTPDVWISVLLGGLVTTAAGVVM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TKLSQHYPGQTFFQYGGDIVGKWLSIVISLLFIEHFVAIAAFEARILAEVITFFLLQQTP
HHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IWAIVMSMMWIGFYSIKDGMGSLARLFEIIFPITILFFLTVVFMSFGIFELDNLRPVLGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCC
GIMPALKGTKATTLSFISAEVMVFLLAFMKKPKDGIKVVVMGIGIAMLFYLTTIVFVIGG
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
LSVDGVTAMTWPALDLIRSFEMPGLIFERFESLLLVIWIMQLFATFSVSYYAASLGLSQI
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKKSRPIMFGLLPVMYLLAMTPKNIDDVFSLGDMIGYIAAVLFGIVPIPLLLVSKMRKK
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVQS
HCCCC
>Mature Secondary Structure
MIRSEDKITTSQAIVVLVSYIMAAGILTLPRTAVEEAGTPDVWISVLLGGLVTTAAGVVM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TKLSQHYPGQTFFQYGGDIVGKWLSIVISLLFIEHFVAIAAFEARILAEVITFFLLQQTP
HHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IWAIVMSMMWIGFYSIKDGMGSLARLFEIIFPITILFFLTVVFMSFGIFELDNLRPVLGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCC
GIMPALKGTKATTLSFISAEVMVFLLAFMKKPKDGIKVVVMGIGIAMLFYLTTIVFVIGG
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
LSVDGVTAMTWPALDLIRSFEMPGLIFERFESLLLVIWIMQLFATFSVSYYAASLGLSQI
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKKSRPIMFGLLPVMYLLAMTPKNIDDVFSLGDMIGYIAAVLFGIVPIPLLLVSKMRKK
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVQS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]