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The map label for this gene is ycgE [H]

Identifier: 52785924

GI number: 52785924

Start: 2135646

End: 2136122

Strand: Reverse

Name: ycgE [H]

Synonym: BLi02175

Alternate gene names: 52785924

Gene position: 2136122-2135646 (Counterclockwise)

Preceding gene: 52785926

Following gene: 52785920

Centisome position: 50.59

GC content: 48.01

Gene sequence:

>477_bases
ATGTCAAGAACAAATCATATTGAAGGAAAAGGGCTGGTCAACGAGCTGATACAGCAGTTGAGGTTTCACAGCACAGCAAC
CGTTTTTCTGCACCAGGCGATCGGCGAGAAAATCGGACTGAACGGAACGGATCATAAATGCCTTGAGATCATCTCGCGGG
AAGGTCAAGTAACAGCGGGGGAGCTCGCCGCAAAAAGCGGACTGACAACGGGAGCGATCACAGGAGTGATCGACCGTCTT
GAGAAAGCGGGCTATGTCAGACGCATCAGGGATTCGTCCGACAGAAGGCGTCTTTTAGTCGAACTGATCCCGGAAAATCT
GGAGACGATATCACATATATTTCATGACTTGGCGCAAGAGTCTGCCGAATTTCTAAGCCGATATTCAGAGGAAGAACTGC
AAACCATTATCAAGTTTTTGAAAAACAGCACGGCGTTTGCCGCCGATTATGCCAAAACCTTAAAAAAGACGAAGTGA

Upstream 100 bases:

>100_bases
AGCGTTTGGCATCGACGCTTCATCCTGTTATGATGATTTATATCAGGAAATAAATATCTTAGCTGCTAAGACATAATGAT
TTTATAGAAGGGTGTTACAG

Downstream 100 bases:

>100_bases
TAAAAGACCGGTTTTGCTGCAACCGGTCTTTTTTGATGTTCATATTTTTTCAATTTGAACTCTTCCTGAAAAGAAAGTTG
CACCACCGCCCATATCAGCT

Product: YcgE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSRTNHIEGKGLVNELIQQLRFHSTATVFLHQAIGEKIGLNGTDHKCLEIISREGQVTAGELAAKSGLTTGAITGVIDRL
EKAGYVRRIRDSSDRRRLLVELIPENLETISHIFHDLAQESAEFLSRYSEEELQTIIKFLKNSTAFAADYAKTLKKTK

Sequences:

>Translated_158_residues
MSRTNHIEGKGLVNELIQQLRFHSTATVFLHQAIGEKIGLNGTDHKCLEIISREGQVTAGELAAKSGLTTGAITGVIDRL
EKAGYVRRIRDSSDRRRLLVELIPENLETISHIFHDLAQESAEFLSRYSEEELQTIIKFLKNSTAFAADYAKTLKKTK
>Mature_157_residues
SRTNHIEGKGLVNELIQQLRFHSTATVFLHQAIGEKIGLNGTDHKCLEIISREGQVTAGELAAKSGLTTGAITGVIDRLE
KAGYVRRIRDSSDRRRLLVELIPENLETISHIFHDLAQESAEFLSRYSEEELQTIIKFLKNSTAFAADYAKTLKKTK

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17679; Mature: 17548

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTNHIEGKGLVNELIQQLRFHSTATVFLHQAIGEKIGLNGTDHKCLEIISREGQVTAG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHH
ELAAKSGLTTGAITGVIDRLEKAGYVRRIRDSSDRRRLLVELIPENLETISHIFHDLAQE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEFLSRYSEEELQTIIKFLKNSTAFAADYAKTLKKTK
HHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRTNHIEGKGLVNELIQQLRFHSTATVFLHQAIGEKIGLNGTDHKCLEIISREGQVTAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHH
ELAAKSGLTTGAITGVIDRLEKAGYVRRIRDSSDRRRLLVELIPENLETISHIFHDLAQE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEFLSRYSEEELQTIIKFLKNSTAFAADYAKTLKKTK
HHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]