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The map label for this gene is ygiK [H]

Identifier: 52785870

GI number: 52785870

Start: 2064476

End: 2065771

Strand: Reverse

Name: ygiK [H]

Synonym: BLi02118

Alternate gene names: 52785870

Gene position: 2065771-2064476 (Counterclockwise)

Preceding gene: 52785871

Following gene: 52785869

Centisome position: 48.92

GC content: 43.36

Gene sequence:

>1296_bases
ATGGCCATAGCAGCCGGTCTCATTTTATCGGCGGTATTCTTCATATTGTTGTTTCTCGGCGTTCCGATTTCTGTAAGTAT
TGCGGCGGCATCCATTGTAACAATGCTTACCATTTTTCCTTTTGATGTTGCCATTTTCACTTCGGCGCAAAAAATGGTCA
CTGGAATCGACAGCTTTGCTTTATTAGCGGTGCCGTTCTTCATTTTATCAGGCATTATTATGAATAATGGCGGTATTGCA
ATGCGGCTCATTAACTTCGCAAAATTGATCAGCGGCAGGCTGCCCGGTTCTCTGGCCCATACAAATGTTGTCGGAAACAT
GTTATTCGGTTCCATTTCCGGTTCGTCTGTAGCTGCTGCTGCTGCAATCGGCGGGGTCATGTCGCCGCTTCAAGAAAAGG
AAGGATATGACCGGACTTACTCTGCCGCAGTAAATATTGCTTCAGCACCAACTGGTTTGCTTATTCCGCCTAGCGGTCTT
TTGATCATTTTCTCATTAGTCAGCGGCGGAACATCTGTTGCCGCTTTATTTATGGCGGGCTATTTGCCGGGAATCTTGTG
GGGGCTGGCTACGATGGTTGTCGCCTGTATGATTGCAAAAAAGAAAAAATACCCTGTTGCGCCAAAGATTACGATTAGTC
AAGGTTTTAAAGTGCTTCTCGATGCGATTCCAAGCCTGTTGCTCATTGTAATCGTAATCGGGGGTATTATCGCCGGTGTA
TTTACAGCAACTGAAGGAGCAGCAATAGCGGTGGCTTATTCCTTATTGTTGTCGCTCTTTTATAGGACATTGAAATGGAA
ACAGCTCCCCAAAATGCTGCTGGAAACGGTAGAAATCACAGCCGTTATTATGTTTTTGGTTGGGACATCAACGATGCTGT
CATTGGTCATGGCGTTTACAGGCATACCGACGGCAATCAGCAATGGAATTTTAGGGATTACAGATAACCCAATTTTGATC
CTGCTGATGATGAATATCATCTTATTAATAATCGGTACATTTATGGACATCACTCCGGCTGTACTAATTTTCACTCCAAT
CTTTCTGCCAATTGTTGAAAGCTTTGGCATGGATCCCGTGCATTTTGGAATTATGATCGTATTTAACCTTTGTATCGGCA
ATATCACTCCTCCTGTAGGAAGTGCTCTGTTTGTAGGATGCAGCATAGGTAAAGTTGATATTGAACGAGTGGTTAAACCG
ATTCTGCCATTTTATGCTGCGATCATGATCGTCCTTTTAATTGTTACCTACATTCCACAAATCAGCTTAGTGTTGCCTCA
ATTATTTGGACTTTAA

Upstream 100 bases:

>100_bases
TACATGAATTCAATTCAAAACAAAAGTCAGGTGATGATGTAAAAAAAGCAGCAAAGATGTGACTGAGGCTTTTTGAAAAC
TAAAAAAGAGGTGAAATGAT

Downstream 100 bases:

>100_bases
GACAGGAGGCGTCTGTTTAATGTCAATTAAAGAAACCTATATGTTTACATTTATGAAAGAAGAGAATAATGTGCTGGATT
TTCATTTGAATGACGGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MAIAAGLILSAVFFILLFLGVPISVSIAAASIVTMLTIFPFDVAIFTSAQKMVTGIDSFALLAVPFFILSGIIMNNGGIA
MRLINFAKLISGRLPGSLAHTNVVGNMLFGSISGSSVAAAAAIGGVMSPLQEKEGYDRTYSAAVNIASAPTGLLIPPSGL
LIIFSLVSGGTSVAALFMAGYLPGILWGLATMVVACMIAKKKKYPVAPKITISQGFKVLLDAIPSLLLIVIVIGGIIAGV
FTATEGAAIAVAYSLLLSLFYRTLKWKQLPKMLLETVEITAVIMFLVGTSTMLSLVMAFTGIPTAISNGILGITDNPILI
LLMMNIILLIIGTFMDITPAVLIFTPIFLPIVESFGMDPVHFGIMIVFNLCIGNITPPVGSALFVGCSIGKVDIERVVKP
ILPFYAAIMIVLLIVTYIPQISLVLPQLFGL

Sequences:

>Translated_431_residues
MAIAAGLILSAVFFILLFLGVPISVSIAAASIVTMLTIFPFDVAIFTSAQKMVTGIDSFALLAVPFFILSGIIMNNGGIA
MRLINFAKLISGRLPGSLAHTNVVGNMLFGSISGSSVAAAAAIGGVMSPLQEKEGYDRTYSAAVNIASAPTGLLIPPSGL
LIIFSLVSGGTSVAALFMAGYLPGILWGLATMVVACMIAKKKKYPVAPKITISQGFKVLLDAIPSLLLIVIVIGGIIAGV
FTATEGAAIAVAYSLLLSLFYRTLKWKQLPKMLLETVEITAVIMFLVGTSTMLSLVMAFTGIPTAISNGILGITDNPILI
LLMMNIILLIIGTFMDITPAVLIFTPIFLPIVESFGMDPVHFGIMIVFNLCIGNITPPVGSALFVGCSIGKVDIERVVKP
ILPFYAAIMIVLLIVTYIPQISLVLPQLFGL
>Mature_430_residues
AIAAGLILSAVFFILLFLGVPISVSIAAASIVTMLTIFPFDVAIFTSAQKMVTGIDSFALLAVPFFILSGIIMNNGGIAM
RLINFAKLISGRLPGSLAHTNVVGNMLFGSISGSSVAAAAAIGGVMSPLQEKEGYDRTYSAAVNIASAPTGLLIPPSGLL
IIFSLVSGGTSVAALFMAGYLPGILWGLATMVVACMIAKKKKYPVAPKITISQGFKVLLDAIPSLLLIVIVIGGIIAGVF
TATEGAAIAVAYSLLLSLFYRTLKWKQLPKMLLETVEITAVIMFLVGTSTMLSLVMAFTGIPTAISNGILGITDNPILIL
LMMNIILLIIGTFMDITPAVLIFTPIFLPIVESFGMDPVHFGIMIVFNLCIGNITPPVGSALFVGCSIGKVDIERVVKPI
LPFYAAIMIVLLIVTYIPQISLVLPQLFGL

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=409, Percent_Identity=33.9853300733496, Blast_Score=215, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45259; Mature: 45128

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCC
>Mature Secondary Structure 
AIAAGLILSAVFFILLFLGVPISVSIAAASIVTMLTIFPFDVAIFTSAQKMVTGIDSFA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVPFFILSGIIMNNGGIAMRLINFAKLISGRLPGSLAHTNVVGNMLFGSISGSSVAAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
AAIGGVMSPLQEKEGYDRTYSAAVNIASAPTGLLIPPSGLLIIFSLVSGGTSVAALFMAG
HHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHH
YLPGILWGLATMVVACMIAKKKKYPVAPKITISQGFKVLLDAIPSLLLIVIVIGGIIAGV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTATEGAAIAVAYSLLLSLFYRTLKWKQLPKMLLETVEITAVIMFLVGTSTMLSLVMAFT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIPTAISNGILGITDNPILILLMMNIILLIIGTFMDITPAVLIFTPIFLPIVESFGMDPV
CCCHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HFGIMIVFNLCIGNITPPVGSALFVGCSIGKVDIERVVKPILPFYAAIMIVLLIVTYIPQ
HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLVLPQLFGL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]