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The map label for this gene is yqeD [H]

Identifier: 52785704

GI number: 52785704

Start: 1906697

End: 1907347

Strand: Reverse

Name: yqeD [H]

Synonym: BLi01946

Alternate gene names: 52785704

Gene position: 1907347-1906697 (Counterclockwise)

Preceding gene: 52785705

Following gene: 52785694

Centisome position: 45.17

GC content: 48.39

Gene sequence:

>651_bases
ATGATCAGAAAACTATTCACTATCATCATCATGGCAAGTATCATCGCGGTCGGATTCGTCTGCAAAGATTCCTGGCTCGA
CGTCATCAGGGACGGAGGCGTTTATTCGGTATTATTCAGCATGCTGCTTGTGGCGGCCTGTGTATTTTTCCCGATCGTCC
CGTTTGCGCTCATTGCCGGATTAAACGGCGCCTTGTTCGGAATCGCAAACGGCGTGCTGATCACGCTGACGGGGTCTATG
CTCGGCACCATGCTCTTGTTTTTCCTCTCACGTTACGGATTCAGAGACATGGCTCGCAGACACTTAACGAAATACCCGAA
AATGAGCGAATATGAAGCGTATTTTAACCAAAATGCTTTTACAGCCGTACTATTGGGCAGGCTGATCCCGGTTATCCCAG
CCGTTGTCATGAATATCGTCTGCGGTTTAAGCAAGGTGAAATGGGCTGTCTTTTTTGCGGCTTCGACGCTTGGAAAAGTC
CCCAACGTTCTCGTCGTCTCTATCGCAGGTGCCAATTTCAGCGAAAACAAGCTGCTCTCTGTCGGCGTCTACGGCTTATA
TATGGCGATCATAGCGTTTGTCATCTACAGAAAGTATCCCCATCTGACTCAAAAACATAAAGAGACGAAACAGACAGGGA
AGCCTTCTTGA

Upstream 100 bases:

>100_bases
CAATTGCAACCTCTCAAAAACTGACGAGATTTTGGCACACTTAGAAGAAGCTTTATTGCAAATGTAGAAGCTAAAGACAA
AGAAAGGCAGCGGGAGCGGT

Downstream 100 bases:

>100_bases
CTCGCTGAGGCGGCAACGAGAGCCGCCGCCTTCGTTTTCGATTGCAAGCTAGCCGATTACAACAGCCGTACCATATCCGA
TGAGTTCGGAGGTTCCCTGG

Product: YqeD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIRKLFTIIIMASIIAVGFVCKDSWLDVIRDGGVYSVLFSMLLVAACVFFPIVPFALIAGLNGALFGIANGVLITLTGSM
LGTMLLFFLSRYGFRDMARRHLTKYPKMSEYEAYFNQNAFTAVLLGRLIPVIPAVVMNIVCGLSKVKWAVFFAASTLGKV
PNVLVVSIAGANFSENKLLSVGVYGLYMAIIAFVIYRKYPHLTQKHKETKQTGKPS

Sequences:

>Translated_216_residues
MIRKLFTIIIMASIIAVGFVCKDSWLDVIRDGGVYSVLFSMLLVAACVFFPIVPFALIAGLNGALFGIANGVLITLTGSM
LGTMLLFFLSRYGFRDMARRHLTKYPKMSEYEAYFNQNAFTAVLLGRLIPVIPAVVMNIVCGLSKVKWAVFFAASTLGKV
PNVLVVSIAGANFSENKLLSVGVYGLYMAIIAFVIYRKYPHLTQKHKETKQTGKPS
>Mature_216_residues
MIRKLFTIIIMASIIAVGFVCKDSWLDVIRDGGVYSVLFSMLLVAACVFFPIVPFALIAGLNGALFGIANGVLITLTGSM
LGTMLLFFLSRYGFRDMARRHLTKYPKMSEYEAYFNQNAFTAVLLGRLIPVIPAVVMNIVCGLSKVKWAVFFAASTLGKV
PNVLVVSIAGANFSENKLLSVGVYGLYMAIIAFVIYRKYPHLTQKHKETKQTGKPS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788049, Length=140, Percent_Identity=30, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23763; Mature: 23763

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKLFTIIIMASIIAVGFVCKDSWLDVIRDGGVYSVLFSMLLVAACVFFPIVPFALIAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LNGALFGIANGVLITLTGSMLGTMLLFFLSRYGFRDMARRHLTKYPKMSEYEAYFNQNAF
CCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCHH
TAVLLGRLIPVIPAVVMNIVCGLSKVKWAVFFAASTLGKVPNVLVVSIAGANFSENKLLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHH
VGVYGLYMAIIAFVIYRKYPHLTQKHKETKQTGKPS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIRKLFTIIIMASIIAVGFVCKDSWLDVIRDGGVYSVLFSMLLVAACVFFPIVPFALIAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LNGALFGIANGVLITLTGSMLGTMLLFFLSRYGFRDMARRHLTKYPKMSEYEAYFNQNAF
CCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCHH
TAVLLGRLIPVIPAVVMNIVCGLSKVKWAVFFAASTLGKVPNVLVVSIAGANFSENKLLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHH
VGVYGLYMAIIAFVIYRKYPHLTQKHKETKQTGKPS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]