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The map label for this gene is patA [H]

Identifier: 52785373

GI number: 52785373

Start: 1577436

End: 1578605

Strand: Reverse

Name: patA [H]

Synonym: BLi01610

Alternate gene names: 52785373

Gene position: 1578605-1577436 (Counterclockwise)

Preceding gene: 52785377

Following gene: 52785370

Centisome position: 37.38

GC content: 47.95

Gene sequence:

>1170_bases
ATGGAACATTTGCTTAATCCAAATGTAAAAGAAATCGAAATCTCAGGGATCCGCAAGTTCTCAAACCTTGTATCCCAGTA
CGAAAACGTAATCTCTTTAACAATCGGCCAGCCTGATTTCTTCACCCCCCACCATGTCAAACAGGCCGCCAAAAAAGCGA
TAGATGAGAATCAAACATCCTACACTCACAACGCCGGATATCCTGAGCTGAGGCAGGCTGTACAGCTTTATATGAAGAAA
AAAGCCGATTTAAATTATGAAGCGGAAAGCGAGATTATTGTGACAACAGGCGCCAGCCAGGCTATCGATTCGGCATTCCG
CACGATTTTATCTCCGGGCGATGAAGTCATTCTTCCGGGGCCGGTATACCCCGGCTATGAGCCGATCATCAAAATGTGCG
GAGCGTCTCCATTGATCATTGACACCACGTCCCACGGCTTTAAGCTGACAGCAAAATTGATCGAGGAAGCGCTGACGCCG
AAGACAAAATGTGTTGTTCTTCCATATCCGTCGAATCCGACGGGAATGACGCTGTCCGAAGAAGAGCTGAAGGACATCGC
CTCCCTTTTAAAAGGCCGAAACGTCTTTGTGCTCTCAGATGAAATATACAGCGAACTCACTTTTGACAGACCGCACCACT
CGATCGCAACTGTGCTAAGGGACCAGACGATCGTCATCGGCGGGCTTTCCAAATCCCACAGCATGACGGGCTGGAGAATC
GGGTTTTTGTTCGCACCGAAGGAAATCGCAAAGCATATTTTAAAAGTCCATCAATACAACGTATCTTGCGCTTCATCGAT
TTCTCAAAAAGCTGCTCTGGAAGCCGTCACCAACGGGTTTGATGACGCTCTGATCATGCGCGAGCAGTATAAAAAACGGC
TGGACTACGTGTACGACAGACTTGTGACGATGGGCCTCGATGTGATTAAACCGTCGGGAGCATTCTACATTTTCCCGTCC
ATCAAATCGTTTGGAATGTCTTCCTTTGACTTCTGCATGTCGCTTCTTGAAGAAGAGGGGCTTGCGATCGTGCCGGGCAG
CTCGTTTTCTGAATACGGGGAAGGCTATGTGAGGATCTCTTACGCATATTCTCCTGATACGCTAAGGGAAGGTCTTGACC
GGCTGGAGTCCTTTGTTTTCAATAAGAGGCAATCGATACAGACTACGTAA

Upstream 100 bases:

>100_bases
ACTTGTTACGAGTTTTTATAAAATTGATTGATTAAAAGATGACAATTGGTCTGATGATGGTAAAATAAGATAAACCATAA
CATTTTTAAGGTGATGCTAA

Downstream 100 bases:

>100_bases
ACAACGGCTTTTACGCCGTTGTTTTTTTATTTTATTTTGGAAATAGAATCTTAAATGTCGTGCCTTTTTCTGCTTTGCTG
TCGACTTCGATGGTTCCGTT

Product: aminotransferase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MEHLLNPNVKEIEISGIRKFSNLVSQYENVISLTIGQPDFFTPHHVKQAAKKAIDENQTSYTHNAGYPELRQAVQLYMKK
KADLNYEAESEIIVTTGASQAIDSAFRTILSPGDEVILPGPVYPGYEPIIKMCGASPLIIDTTSHGFKLTAKLIEEALTP
KTKCVVLPYPSNPTGMTLSEEELKDIASLLKGRNVFVLSDEIYSELTFDRPHHSIATVLRDQTIVIGGLSKSHSMTGWRI
GFLFAPKEIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDRLVTMGLDVIKPSGAFYIFPS
IKSFGMSSFDFCMSLLEEEGLAIVPGSSFSEYGEGYVRISYAYSPDTLREGLDRLESFVFNKRQSIQTT

Sequences:

>Translated_389_residues
MEHLLNPNVKEIEISGIRKFSNLVSQYENVISLTIGQPDFFTPHHVKQAAKKAIDENQTSYTHNAGYPELRQAVQLYMKK
KADLNYEAESEIIVTTGASQAIDSAFRTILSPGDEVILPGPVYPGYEPIIKMCGASPLIIDTTSHGFKLTAKLIEEALTP
KTKCVVLPYPSNPTGMTLSEEELKDIASLLKGRNVFVLSDEIYSELTFDRPHHSIATVLRDQTIVIGGLSKSHSMTGWRI
GFLFAPKEIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDRLVTMGLDVIKPSGAFYIFPS
IKSFGMSSFDFCMSLLEEEGLAIVPGSSFSEYGEGYVRISYAYSPDTLREGLDRLESFVFNKRQSIQTT
>Mature_389_residues
MEHLLNPNVKEIEISGIRKFSNLVSQYENVISLTIGQPDFFTPHHVKQAAKKAIDENQTSYTHNAGYPELRQAVQLYMKK
KADLNYEAESEIIVTTGASQAIDSAFRTILSPGDEVILPGPVYPGYEPIIKMCGASPLIIDTTSHGFKLTAKLIEEALTP
KTKCVVLPYPSNPTGMTLSEEELKDIASLLKGRNVFVLSDEIYSELTFDRPHHSIATVLRDQTIVIGGLSKSHSMTGWRI
GFLFAPKEIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDRLVTMGLDVIKPSGAFYIFPS
IKSFGMSSFDFCMSLLEEEGLAIVPGSSFSEYGEGYVRISYAYSPDTLREGLDRLESFVFNKRQSIQTT

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=403, Percent_Identity=26.7990074441687, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI169881279, Length=403, Percent_Identity=26.7990074441687, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI56713254, Length=393, Percent_Identity=28.7531806615776, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI56713256, Length=393, Percent_Identity=28.7531806615776, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI169881281, Length=304, Percent_Identity=26.3157894736842, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4507369, Length=377, Percent_Identity=26.525198938992, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI19263340, Length=400, Percent_Identity=24, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI215599424, Length=424, Percent_Identity=23.8207547169811, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI149944424, Length=274, Percent_Identity=25.1824817518248, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI7705897, Length=356, Percent_Identity=22.4719101123595, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI33469970, Length=356, Percent_Identity=22.4719101123595, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1786816, Length=361, Percent_Identity=24.9307479224377, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1788722, Length=356, Percent_Identity=29.4943820224719, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1788627, Length=389, Percent_Identity=25.1928020565553, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787710, Length=304, Percent_Identity=25.6578947368421, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787909, Length=274, Percent_Identity=24.0875912408759, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17567369, Length=427, Percent_Identity=25.0585480093677, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71994476, Length=319, Percent_Identity=26.0188087774295, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71994472, Length=319, Percent_Identity=26.0188087774295, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17567663, Length=374, Percent_Identity=22.9946524064171, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71981209, Length=370, Percent_Identity=23.5135135135135, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322401, Length=394, Percent_Identity=26.6497461928934, Blast_Score=120, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6320317, Length=352, Percent_Identity=26.7045454545455, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6323118, Length=371, Percent_Identity=25.8760107816712, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28573069, Length=394, Percent_Identity=27.4111675126904, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI24646114, Length=394, Percent_Identity=27.4111675126904, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI28573067, Length=394, Percent_Identity=27.4111675126904, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI28573065, Length=394, Percent_Identity=27.4111675126904, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI18859735, Length=376, Percent_Identity=24.7340425531915, Blast_Score=85, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 43366; Mature: 43366

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHLLNPNVKEIEISGIRKFSNLVSQYENVISLTIGQPDFFTPHHVKQAAKKAIDENQTS
CCCCCCCCCCEEEHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
YTHNAGYPELRQAVQLYMKKKADLNYEAESEIIVTTGASQAIDSAFRTILSPGDEVILPG
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEECC
PVYPGYEPIIKMCGASPLIIDTTSHGFKLTAKLIEEALTPKTKCVVLPYPSNPTGMTLSE
CCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCH
EELKDIASLLKGRNVFVLSDEIYSELTFDRPHHSIATVLRDQTIVIGGLSKSHSMTGWRI
HHHHHHHHHHCCCCEEEECHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEE
GFLFAPKEIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDR
EEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LVTMGLDVIKPSGAFYIFPSIKSFGMSSFDFCMSLLEEEGLAIVPGSSFSEYGEGYVRIS
HHHHCHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHCCEEEECCCCHHHHCCCEEEEE
YAYSPDTLREGLDRLESFVFNKRQSIQTT
EEECHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MEHLLNPNVKEIEISGIRKFSNLVSQYENVISLTIGQPDFFTPHHVKQAAKKAIDENQTS
CCCCCCCCCCEEEHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
YTHNAGYPELRQAVQLYMKKKADLNYEAESEIIVTTGASQAIDSAFRTILSPGDEVILPG
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEECC
PVYPGYEPIIKMCGASPLIIDTTSHGFKLTAKLIEEALTPKTKCVVLPYPSNPTGMTLSE
CCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCH
EELKDIASLLKGRNVFVLSDEIYSELTFDRPHHSIATVLRDQTIVIGGLSKSHSMTGWRI
HHHHHHHHHHCCCCEEEECHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEE
GFLFAPKEIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDR
EEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LVTMGLDVIKPSGAFYIFPSIKSFGMSSFDFCMSLLEEEGLAIVPGSSFSEYGEGYVRIS
HHHHCHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHCCEEEECCCCHHHHCCCEEEEE
YAYSPDTLREGLDRLESFVFNKRQSIQTT
EEECHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2104615 [H]