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The map label for this gene is ykwD [H]

Identifier: 52785370

GI number: 52785370

Start: 1572254

End: 1572976

Strand: Reverse

Name: ykwD [H]

Synonym: BLi01607

Alternate gene names: 52785370

Gene position: 1572976-1572254 (Counterclockwise)

Preceding gene: 52785373

Following gene: 52785366

Centisome position: 37.25

GC content: 43.29

Gene sequence:

>723_bases
ATGAAAAAAGCTTTTCTTTTATCAGCAGCAGCTGCAGCAACGCTCTTCACATTCAGCGGCGTTCAGCACGCAGACGCTAA
AGAGCAGCAGCAAGTACAAGTCAAAACCGTTCATTCCATAAATGTAACTGATCTCGCGGGCAAACTGAATATCCAAAACA
TGAACCAGCTTTCTAAAGCTGACCAAGAAAAAATTCAGTCCCTGCTTCATTCTTATATGAAACAAGCAACTCAACAGCCT
AAAGCTTCTGCACCGAAGGCTTCTGCTCCTAAAGCTTCAAAGCCTGCGGCTTCAAAAGAGCAGACTTCACAGCAAAAGCA
AAATACAGCGCCTGCATCTTCTTCTGTAAGCGCGTATGAAAAAGAAGTTGTTGAACTGACGAATGCAGAAAGAAAGAAAC
AAGGGCTAAAACCTCTTACATTGGATGAAAAGCTGAGCAAGGTTGCCCGCACGAAATCTCAAGATATGAAAGATAACAAC
TATTTTGATCACAACAGCCCGACTTACGGTTCTCCATTTGACATGATGAAGAAATTCGGCATCACATACCGCACTGCCGG
AGAAAACATCGCAAAAGGCCAAAAAACGCCTCAAGAAGTCGTCAAAGCTTGGATGAACAGTGAAGGCCACAGAAAAAACA
TTATGAATCCTAACTTCACGCATATCGGTGTCGGATATGTGAAGGACGGCAACTACTGGACTCAGCAGTTCATCGGAAAA
TAA

Upstream 100 bases:

>100_bases
TGTCAAAGGGAATATATGGATCTATTATTTCAAAAAAGCCATGTTATGATTCTAGTGTACGAAACAACAACTACTACAAC
ATTTAGGAGGATTACTGTTT

Downstream 100 bases:

>100_bases
GAACCAGCAAAAAACCACTTGCATGCAGCAAGTGGTTTTTTTCGTTATTTGTATTCTGTCCAAAGCTTGTACAGACTTTG
GGTGCCGCTGTTTTCTTCGC

Product: YkwD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKKAFLLSAAAAATLFTFSGVQHADAKEQQQVQVKTVHSINVTDLAGKLNIQNMNQLSKADQEKIQSLLHSYMKQATQQP
KASAPKASAPKASKPAASKEQTSQQKQNTAPASSSVSAYEKEVVELTNAERKKQGLKPLTLDEKLSKVARTKSQDMKDNN
YFDHNSPTYGSPFDMMKKFGITYRTAGENIAKGQKTPQEVVKAWMNSEGHRKNIMNPNFTHIGVGYVKDGNYWTQQFIGK

Sequences:

>Translated_240_residues
MKKAFLLSAAAAATLFTFSGVQHADAKEQQQVQVKTVHSINVTDLAGKLNIQNMNQLSKADQEKIQSLLHSYMKQATQQP
KASAPKASAPKASKPAASKEQTSQQKQNTAPASSSVSAYEKEVVELTNAERKKQGLKPLTLDEKLSKVARTKSQDMKDNN
YFDHNSPTYGSPFDMMKKFGITYRTAGENIAKGQKTPQEVVKAWMNSEGHRKNIMNPNFTHIGVGYVKDGNYWTQQFIGK
>Mature_240_residues
MKKAFLLSAAAAATLFTFSGVQHADAKEQQQVQVKTVHSINVTDLAGKLNIQNMNQLSKADQEKIQSLLHSYMKQATQQP
KASAPKASAPKASKPAASKEQTSQQKQNTAPASSSVSAYEKEVVELTNAERKKQGLKPLTLDEKLSKVARTKSQDMKDNN
YFDHNSPTYGSPFDMMKKFGITYRTAGENIAKGQKTPQEVVKAWMNSEGHRKNIMNPNFTHIGVGYVKDGNYWTQQFIGK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 26567; Mature: 26567

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAFLLSAAAAATLFTFSGVQHADAKEQQQVQVKTVHSINVTDLAGKLNIQNMNQLSKA
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
DQEKIQSLLHSYMKQATQQPKASAPKASAPKASKPAASKEQTSQQKQNTAPASSSVSAYE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
KEVVELTNAERKKQGLKPLTLDEKLSKVARTKSQDMKDNNYFDHNSPTYGSPFDMMKKFG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC
ITYRTAGENIAKGQKTPQEVVKAWMNSEGHRKNIMNPNFTHIGVGYVKDGNYWTQQFIGK
CEEEECCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHCCC
>Mature Secondary Structure
MKKAFLLSAAAAATLFTFSGVQHADAKEQQQVQVKTVHSINVTDLAGKLNIQNMNQLSKA
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
DQEKIQSLLHSYMKQATQQPKASAPKASAPKASKPAASKEQTSQQKQNTAPASSSVSAYE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
KEVVELTNAERKKQGLKPLTLDEKLSKVARTKSQDMKDNNYFDHNSPTYGSPFDMMKKFG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC
ITYRTAGENIAKGQKTPQEVVKAWMNSEGHRKNIMNPNFTHIGVGYVKDGNYWTQQFIGK
CEEEECCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]